top of page
mmu_circTrp53bp1_2784
Basic information of circular RNA
PanCircBase ID:
mmu_circTrp53bp1_2784
mm39_Chr. Position ID:
chr2|121059068|121101189|-
Gene name:
Trp53bp1
Transcript:
ENSMUST00000110647.8
CircRNA type:
Exonic circular (circ)RNA
Exon/Intron count:
12
Exon/intron indexes:
13,12,11,10,9,8,7,6,5,4,3,2
Exon/intron offsets:
0,6985,15306,18913,19576,23280,25014,27934,30556,41316,41631,41936
Genomic length:
42121
Exon/intron sizes in nt:
1,20,12,97,20,39,51,27,00,00,00,00,00,00,00,00,000
Flanking exon/introns:
chr2:121058329-121059068|chr2:121101189-121101752
Splice length:
2784
Other database IDs:
Human Ortholog IDs:
Mature spliced Sequence:
GGGAGCAGATGGACCCTACTGGAAGTCAATTGGATTCAGATTTCTCTCAGCAAGACACTCCTTGCCTGATAATAGAAGATTCTCAGCCTGAAAGCCAGGTTCTGGAAGAAGATGCAGGCTCTCACTTCAGCGTGCTATCTCGACACCTTCCTAATCTGCAGATGCACAAAGAGAACCCCGTGTTGGATATTGTATCAAATCCGGAACAATCTGCTGTAGAACAAGGAGACAGTAATAGCTCATTCAATGAACATCTGAAAGAAAAGAAAGCTTCAGATCCTGTGGAGTCTTCTCATTTGGGTACCAGTGGTTCCATCAGTCAGGTCATTGAACGGTTACCTCAGCCAAACAGGACAAGCAGTGCTCTGGCAGTGACAGTAGAAGCTGCTTCTCTCCCAGAGGAGGAGAAGGAAGAAGAGGAGTTAGAGGAGGAGAAGGAAGGGGTGGGAGCAAACGCTCCCGGTGCTGACTCCCTTGCTGCTGAAGATTCTGCTTCATCACAGTTGGGCTTTGGAGTTCTGGAACTGTCCCAGAGCCAGGATGTTGAAGAACATACAGTGCCATATGATGTCAACCAAGAGCATCTGCAGTTGGTGACCACTAACTCGGGTTCTAGCCCGCTATCTGATGTGGATGCGAGCACTGCAATTAAATGTGAAGAACAGCCCACTGAAGATATTGCCATGATAGAACAGCCCAGCAAAGACATCCCTGTTACAGTACAGCCCGGTAAAGGTATCCATGTGGTAGAAGAACAAAATCTACCACTTGTAAGGTCCGAAGACCGGCCGTCCAGTCCTCAAGTTTCTGTTGCTGCTGTGGAAACAAAGGAACAGGTACCTGCCCGGGAGCTGCTGGAAGAGGGGCCGCAGGTTCAGCCGTCATCAGAGCCTGAGGTTTCCTCAACCCAGGAGGACTTGTTTGACCAGAGTAGTAAAACAGCTTCTGATGGTTGTTCTACTCCTTCAAGGGAGGAAGGTGGGTGCTCTCCGGTTTCCACACCTGCTACCACCCTGCAGCTCCTGCAGCTCTCTGGTCAGAAGCCCCTTGTTCAGGAGAGTCTTTCCACGAATTCCTCAGATCTTGTTGCTCCTTCCCCTGATGCTTTCCGATCTACCCCTTTTATCGTTCCTAGCAGTCCCACAGAGCAAGGAGGGAGAAAAGATGAGCCCATGGATATGTCAGTGATACCTGTAGGAGGGGAGCCTTTCCAGAAGCTTCATGATGACGAAGCAATGGAGACAGAAAAACCCCTTCTCCCGTCTCAGCCTGCTGTGTCACCGCAAGCATCAACACCAGTGTCTCGGAGCACGCCAGTTTTCACTCCTGGCTCTCTTCCCATCCCGTCCCAGCCCGAGTTCTCTCATGACATTTTCATTCCATCACCAAGTCTGGAAGAACCATCAGATGATGTGAAGAAAGGTGGAGGTTTACATAGCTCATCTCTTACTGTTGAGTGTTCCAAGACTTCAGAGAGTGAACCAAAGAATTTCACTGATGACCTTGGGCTCTCCATGACAGGGGATTCTTGCAAACTGATGCTTTCTACAAGTGAGTATAGTCAGTCCTCAAAGATGGAGAGCTTGGGTTCTCCCAGGACTGAGGAAGACAGAGAGAACACACAGATTGACGATACTGAACCTTTGTCTCCAGTTAGCAATTCTAAACTTCCTGCTGACAGTGAGAATGTCCTGGTGACTCCATCGCAGGACGACCAGGTAGAAATGAGTCAGAATGTAGATAAAGCAAAAGAGGATGAAACGGAGGACAGAGGTGACTGTAAAGGCAGAGAAGACGCGGTTGCTGAAGATGTTTGCATCGACCTCACTTGTGATTCTGGGAGTCAGGCAGTTCCTTCTCCAGCTACCCGTTCGGAGGCACTTTCCAGTGTCTTAGATCAGGAGGAAGCTATGGACACTAAAGAACACCATCCAGAGGAAGGGTTTTCGGGATCTGAAGTAGAAGAAGTCCCTGAGACTCCCTGTGGAAGTCACAGAGAGGAGCCCAAAGAAGAACCGATGGAAAGTATCCCACTGCACCTTTCTCTGACTGAAACCCAGTCTGAGGCATTGTGTCTGCAGAAGGAAGCCCCCAAAGAGGAATGCCCAGAAGCTATGGAAGTTGAAACCAGTGTGATTAGTATTGACTCCCCCCAGAAACTGCAAGTACTTGACCAGGAATTAGAGCATAAGGACCCAGACACCTGGGAAGAAGCTACTTCTGAGGACTCCAGTGTTGTTATCGTTGATGTGAAGGAGCCCTCTCCTCGAGCTGATGTTTCCTGTGAACCTTTGGAGGAGGTGGAGAAATGCTCTGACTCCCAGTCCTGGGAGGGTGTGGCTCCAGAGGAAGAACCATGTGCTGAGAATAGATTAGATACTCCAGAAGAAAAGCGTATAGAATGTGATGGAGATTCAAAAGCAGAGACCACAGAAAAGGACGCTGTAACAGAAGACTCTCCACAACCTCCTTTGCCTTCAGTGAGAGACGAACCTGTCAGACCCGATCAGGAGACACAGCAGCCCCAAGTTCAAGAGAAAGAGAGCCCAGTGACTGTAGATGCAGAAGTGGCTGATGACAAGCAGCTGGGACCAGAGGGCGCATGCCAGCAGCTTGAGAAGGCCCCTGCCTGTGCCTCACAGAGTTTCTGTGAAAGTTCTAGTGAAACTCCATTTCATTTCACTTTGCCTAAAGAAGGTGATATTATCCCACCATTGACTGGCGCAACCCCACCTCTTATTGGGCACCTAAAATTGGAGCCCAAGAGACATAGTACTCCTATTG
Divergent primers for circular RNA PCR
Primer Set-1
Forward primer
Tm
Reverse primer
Tm
Product size
GCGCAACCCCACCTCTTATT
60.68
TGGCTTTCAGGCTGAGAATCT
59.37
160
Primer Set-2
Forward primer
Tm
Reverse primer
Tm
Product size
GCGCAACCCCACCTCTTATT
60.68
CTGGCTTTCAGGCTGAGAATC
58.98
161
PCR template sequence:
TTGCCTAAAGAAGGTGATATTATCCCACCATTGACTGGCGCAACCCCACCTCTTATTGGGCACCTAAAATTGGAGCCCAAGAGACATAGTACTCCTATTGGGGAGCAGATGGACCCTACTGGAAGTCAATTGGATTCAGATTTCTCTCAGCAAGACACTCCTTGCCTGATAATAGAAGATTCTCAGCCTGAAAGCCAGGT
Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs
31
Interacting miRNAs (#binding sites)
mmu-miR-207(2), mmu-miR-9-5p(1), mmu-miR-20b-5p(1), mmu-miR-16-5p(1), mmu-miR-15a-5p(1), mmu-miR-106a-5p(1), mmu-miR-93-5p(1), mmu-miR-20a-5p(1), mmu-miR-17-5p(1), mmu-miR-223-3p(1), mmu-miR-322-5p(1), mmu-miR-326-3p(1), mmu-miR-143-3p(1), mmu-miR-185-5p(1), mmu-miR-339-5p(1), mmu-miR-139-5p(1), mmu-miR-214-3p(1), mmu-miR-136-5p(1), mmu-miR-26b-5p(1), mmu-miR-29b-1-5p(1), mmu-miR-676-3p(1), mmu-miR-127-5p(1), mmu-miR-483-5p(1), mmu-miR-183-5p(1), mmu-miR-324-3p(1), mmu-miR-98-5p(1), mmu-miR-29b-2-5p(1), mmu-miR-539-5p(1), mmu-miR-697(1), mmu-miR-1904(1), mmu-miR-7a-2-3p(1)
siRNAs for circular RNA silencing
Junction sequence
AGTACTCCTATTGGGGAGCAGATGGA
siRNA sets
NA
Protein-coding potential of circular RNAs
CPAT analysis
CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length
CIRCTRP53BP1_2784_ORF_1
1.2726
0.210639748
1
5559
ORF sequence:
ATGGACCCTACTGGAAGTCAATTGGATTCAGATTTCTCTCAGCAAGACACTCCTTGCCTGATAATAGAAGATTCTCAGCCTGAAAGCCAGGTTCTGGAAGAAGATGCAGGCTCTCACTTCAGCGTGCTATCTCGACACCTTCCTAATCTGCAGATGCACAAAGAGAACCCCGTGTTGGATATTGTATCAAATCCGGAACAATCTGCTGTAGAACAAGGAGACAGTAATAGCTCATTCAATGAACATCTGAAAGAAAAGAAAGCTTCAGATCCTGTGGAGTCTTCTCATTTGGGTACCAGTGGTTCCATCAGTCAGGTCATTGAACGGTTACCTCAGCCAAACAGGACAAGCAGTGCTCTGGCAGTGACAGTAGAAGCTGCTTCTCTCCCAGAGGAGGAGAAGGAAGAAGAGGAGTTAGAGGAGGAGAAGGAAGGGGTGGGAGCAAACGCTCCCGGTGCTGACTCCCTTGCTGCTGAAGATTCTGCTTCATCACAGTTGGGCTTTGGAGTTCTGGAACTGTCCCAGAGCCAGGATGTTGAAGAACATACAGTGCCATATGATGTCAACCAAGAGCATCTGCAGTTGGTGACCACTAACTCGGGTTCTAGCCCGCTATCTGATGTGGATGCGAGCACTGCAATTAAATGTGAAGAACAGCCCACTGAAGATATTGCCATGATAGAACAGCCCAGCAAAGACATCCCTGTTACAGTACAGCCCGGTAAAGGTATCCATGTGGTAGAAGAACAAAATCTACCACTTGTAAGGTCCGAAGACCGGCCGTCCAGTCCTCAAGTTTCTGTTGCTGCTGTGGAAACAAAGGAACAGGTACCTGCCCGGGAGCTGCTGGAAGAGGGGCCGCAGGTTCAGCCGTCATCAGAGCCTGAGGTTTCCTCAACCCAGGAGGACTTGTTTGACCAGAGTAGTAAAACAGCTTCTGATGGTTGTTCTACTCCTTCAAGGGAGGAAGGTGGGTGCTCTCCGGTTTCCACACCTGCTACCACCCTGCAGCTCCTGCAGCTCTCTGGTCAGAAGCCCCTTGTTCAGGAGAGTCTTTCCACGAATTCCTCAGATCTTGTTGCTCCTTCCCCTGATGCTTTCCGATCTACCCCTTTTATCGTTCCTAGCAGTCCCACAGAGCAAGGAGGGAGAAAAGATGAGCCCATGGATATGTCAGTGATACCTGTAGGAGGGGAGCCTTTCCAGAAGCTTCATGATGACGAAGCAATGGAGACAGAAAAACCCCTTCTCCCGTCTCAGCCTGCTGTGTCACCGCAAGCATCAACACCAGTGTCTCGGAGCACGCCAGTTTTCACTCCTGGCTCTCTTCCCATCCCGTCCCAGCCCGAGTTCTCTCATGACATTTTCATTCCATCACCAAGTCTGGAAGAACCATCAGATGATGTGAAGAAAGGTGGAGGTTTACATAGCTCATCTCTTACTGTTGAGTGTTCCAAGACTTCAGAGAGTGAACCAAAGAATTTCACTGATGACCTTGGGCTCTCCATGACAGGGGATTCTTGCAAACTGATGCTTTCTACAAGTGAGTATAGTCAGTCCTCAAAGATGGAGAGCTTGGGTTCTCCCAGGACTGAGGAAGACAGAGAGAACACACAGATTGACGATACTGAACCTTTGTCTCCAGTTAGCAATTCTAAACTTCCTGCTGACAGTGAGAATGTCCTGGTGACTCCATCGCAGGACGACCAGGTAGAAATGAGTCAGAATGTAGATAAAGCAAAAGAGGATGAAACGGAGGACAGAGGTGACTGTAAAGGCAGAGAAGACGCGGTTGCTGAAGATGTTTGCATCGACCTCACTTGTGATTCTGGGAGTCAGGCAGTTCCTTCTCCAGCTACCCGTTCGGAGGCACTTTCCAGTGTCTTAGATCAGGAGGAAGCTATGGACACTAAAGAACACCATCCAGAGGAAGGGTTTTCGGGATCTGAAGTAGAAGAAGTCCCTGAGACTCCCTGTGGAAGTCACAGAGAGGAGCCCAAAGAAGAACCGATGGAAAGTATCCCACTGCACCTTTCTCTGACTGAAACCCAGTCTGAGGCATTGTGTCTGCAGAAGGAAGCCCCCAAAGAGGAATGCCCAGAAGCTATGGAAGTTGAAACCAGTGTGATTAGTATTGACTCCCCCCAGAAACTGCAAGTACTTGACCAGGAATTAGAGCATAAGGACCCAGACACCTGGGAAGAAGCTACTTCTGAGGACTCCAGTGTTGTTATCGTTGATGTGAAGGAGCCCTCTCCTCGAGCTGATGTTTCCTGTGAACCTTTGGAGGAGGTGGAGAAATGCTCTGACTCCCAGTCCTGGGAGGGTGTGGCTCCAGAGGAAGAACCATGTGCTGAGAATAGATTAGATACTCCAGAAGAAAAGCGTATAGAATGTGATGGAGATTCAAAAGCAGAGACCACAGAAAAGGACGCTGTAACAGAAGACTCTCCACAACCTCCTTTGCCTTCAGTGAGAGACGAACCTGTCAGACCCGATCAGGAGACACAGCAGCCCCAAGTTCAAGAGAAAGAGAGCCCAGTGACTGTAGATGCAGAAGTGGCTGATGACAAGCAGCTGGGACCAGAGGGCGCATGCCAGCAGCTTGAGAAGGCCCCTGCCTGTGCCTCACAGAGTTTCTGTGAAAGTTCTAGTGAAACTCCATTTCATTTCACTTTGCCTAAAGAAGGTGATATTATCCCACCATTGACTGGCGCAACCCCACCTCTTATTGGGCACCTAAAATTGGAGCCCAAGAGACATAGTACTCCTATTGGGGAGCAGATGGACCCTACTGGAAGTCAATTGGATTCAGATTTCTCTCAGCAAGACACTCCTTGCCTGATAATAGAAGATTCTCAGCCTGAAAGCCAGGTTCTGGAAGAAGATGCAGGCTCTCACTTCAGCGTGCTATCTCGACACCTTCCTAATCTGCAGATGCACAAAGAGAACCCCGTGTTGGATATTGTATCAAATCCGGAACAATCTGCTGTAGAACAAGGAGACAGTAATAGCTCATTCAATGAACATCTGAAAGAAAAGAAAGCTTCAGATCCTGTGGAGTCTTCTCATTTGGGTACCAGTGGTTCCATCAGTCAGGTCATTGAACGGTTACCTCAGCCAAACAGGACAAGCAGTGCTCTGGCAGTGACAGTAGAAGCTGCTTCTCTCCCAGAGGAGGAGAAGGAAGAAGAGGAGTTAGAGGAGGAGAAGGAAGGGGTGGGAGCAAACGCTCCCGGTGCTGACTCCCTTGCTGCTGAAGATTCTGCTTCATCACAGTTGGGCTTTGGAGTTCTGGAACTGTCCCAGAGCCAGGATGTTGAAGAACATACAGTGCCATATGATGTCAACCAAGAGCATCTGCAGTTGGTGACCACTAACTCGGGTTCTAGCCCGCTATCTGATGTGGATGCGAGCACTGCAATTAAATGTGAAGAACAGCCCACTGAAGATATTGCCATGATAGAACAGCCCAGCAAAGACATCCCTGTTACAGTACAGCCCGGTAAAGGTATCCATGTGGTAGAAGAACAAAATCTACCACTTGTAAGGTCCGAAGACCGGCCGTCCAGTCCTCAAGTTTCTGTTGCTGCTGTGGAAACAAAGGAACAGGTACCTGCCCGGGAGCTGCTGGAAGAGGGGCCGCAGGTTCAGCCGTCATCAGAGCCTGAGGTTTCCTCAACCCAGGAGGACTTGTTTGACCAGAGTAGTAAAACAGCTTCTGATGGTTGTTCTACTCCTTCAAGGGAGGAAGGTGGGTGCTCTCCGGTTTCCACACCTGCTACCACCCTGCAGCTCCTGCAGCTCTCTGGTCAGAAGCCCCTTGTTCAGGAGAGTCTTTCCACGAATTCCTCAGATCTTGTTGCTCCTTCCCCTGATGCTTTCCGATCTACCCCTTTTATCGTTCCTAGCAGTCCCACAGAGCAAGGAGGGAGAAAAGATGAGCCCATGGATATGTCAGTGATACCTGTAGGAGGGGAGCCTTTCCAGAAGCTTCATGATGACGAAGCAATGGAGACAGAAAAACCCCTTCTCCCGTCTCAGCCTGCTGTGTCACCGCAAGCATCAACACCAGTGTCTCGGAGCACGCCAGTTTTCACTCCTGGCTCTCTTCCCATCCCGTCCCAGCCCGAGTTCTCTCATGACATTTTCATTCCATCACCAAGTCTGGAAGAACCATCAGATGATGTGAAGAAAGGTGGAGGTTTACATAGCTCATCTCTTACTGTTGAGTGTTCCAAGACTTCAGAGAGTGAACCAAAGAATTTCACTGATGACCTTGGGCTCTCCATGACAGGGGATTCTTGCAAACTGATGCTTTCTACAAGTGAGTATAGTCAGTCCTCAAAGATGGAGAGCTTGGGTTCTCCCAGGACTGAGGAAGACAGAGAGAACACACAGATTGACGATACTGAACCTTTGTCTCCAGTTAGCAATTCTAAACTTCCTGCTGACAGTGAGAATGTCCTGGTGACTCCATCGCAGGACGACCAGGTAGAAATGAGTCAGAATGTAGATAAAGCAAAAGAGGATGAAACGGAGGACAGAGGTGACTGTAAAGGCAGAGAAGACGCGGTTGCTGAAGATGTTTGCATCGACCTCACTTGTGATTCTGGGAGTCAGGCAGTTCCTTCTCCAGCTACCCGTTCGGAGGCACTTTCCAGTGTCTTAGATCAGGAGGAAGCTATGGACACTAAAGAACACCATCCAGAGGAAGGGTTTTCGGGATCTGAAGTAGAAGAAGTCCCTGAGACTCCCTGTGGAAGTCACAGAGAGGAGCCCAAAGAAGAACCGATGGAAAGTATCCCACTGCACCTTTCTCTGACTGAAACCCAGTCTGAGGCATTGTGTCTGCAGAAGGAAGCCCCCAAAGAGGAATGCCCAGAAGCTATGGAAGTTGAAACCAGTGTGATTAGTATTGACTCCCCCCAGAAACTGCAAGTACTTGACCAGGAATTAGAGCATAAGGACCCAGACACCTGGGAAGAAGCTACTTCTGAGGACTCCAGTGTTGTTATCGTTGATGTGAAGGAGCCCTCTCCTCGAGCTGATGTTTCCTGTGAACCTTTGGAGGAGGTGGAGAAATGCTCTGACTCCCAGTCCTGGGAGGGTGTGGCTCCAGAGGAAGAACCATGTGCTGAGAATAGATTAGATACTCCAGAAGAAAAGCGTATAGAATGTGATGGAGATTCAAAAGCAGAGACCACAGAAAAGGACGCTGTAACAGAAGACTCTCCACAACCTCCTTTGCCTTCAGTGAGAGACGAACCTGTCAGACCCGATCAGGAGACACAGCAGCCCCAAGTTCAAGAGAAAGAGAGCCCAGTGACTGTAGATGCAGAAGTGGCTGATGACAAGCAGCTGGGACCAGAGGGCGCATGCCAGCAGCTTGAGAAGGCCCCTGCCTGTGCCTCACAGAGTTTCTGTGAAAGTTCTAGTGAAACTCCATTTCATTTCACTTTGCCTAAAGAAGGTGATATTATCCCACCATTGACTGGCGCAACCCCACCTCTTATTGGGCACCTAAAATTGGAGCCCAAGAGACATAGTACTCCTATT
Peptide sequence:
MDPTGSQLDSDFSQQDTPCLIIEDSQPESQVLEEDAGSHFSVLSRHLPNLQMHKENPVLDIVSNPEQSAVEQGDSNSSFNEHLKEKKASDPVESSHLGTSGSISQVIERLPQPNRTSSALAVTVEAASLPEEEKEEEELEEEKEGVGANAPGADSLAAEDSASSQLGFGVLELSQSQDVEEHTVPYDVNQEHLQLVTTNSGSSPLSDVDASTAIKCEEQPTEDIAMIEQPSKDIPVTVQPGKGIHVVEEQNLPLVRSEDRPSSPQVSVAAVETKEQVPARELLEEGPQVQPSSEPEVSSTQEDLFDQSSKTASDGCSTPSREEGGCSPVSTPATTLQLLQLSGQKPLVQESLSTNSSDLVAPSPDAFRSTPFIVPSSPTEQGGRKDEPMDMSVIPVGGEPFQKLHDDEAMETEKPLLPSQPAVSPQASTPVSRSTPVFTPGSLPIPSQPEFSHDIFIPSPSLEEPSDDVKKGGGLHSSSLTVECSKTSESEPKNFTDDLGLSMTGDSCKLMLSTSEYSQSSKMESLGSPRTEEDRENTQIDDTEPLSPVSNSKLPADSENVLVTPSQDDQVEMSQNVDKAKEDETEDRGDCKGREDAVAEDVCIDLTCDSGSQAVPSPATRSEALSSVLDQEEAMDTKEHHPEEGFSGSEVEEVPETPCGSHREEPKEEPMESIPLHLSLTETQSEALCLQKEAPKEECPEAMEVETSVISIDSPQKLQVLDQELEHKDPDTWEEATSEDSSVVIVDVKEPSPRADVSCEPLEEVEKCSDSQSWEGVAPEEEPCAENRLDTPEEKRIECDGDSKAETTEKDAVTEDSPQPPLPSVRDEPVRPDQETQQPQVQEKESPVTVDAEVADDKQLGPEGACQQLEKAPACASQSFCESSSETPFHFTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTPIGEQMDPTGSQLDSDFSQQDTPCLIIEDSQPESQVLEEDAGSHFSVLSRHLPNLQMHKENPVLDIVSNPEQSAVEQGDSNSSFNEHLKEKKASDPVESSHLGTSGSISQVIERLPQPNRTSSALAVTVEAASLPEEEKEEEELEEEKEGVGANAPGADSLAAEDSASSQLGFGVLELSQSQDVEEHTVPYDVNQEHLQLVTTNSGSSPLSDVDASTAIKCEEQPTEDIAMIEQPSKDIPVTVQPGKGIHVVEEQNLPLVRSEDRPSSPQVSVAAVETKEQVPARELLEEGPQVQPSSEPEVSSTQEDLFDQSSKTASDGCSTPSREEGGCSPVSTPATTLQLLQLSGQKPLVQESLSTNSSDLVAPSPDAFRSTPFIVPSSPTEQGGRKDEPMDMSVIPVGGEPFQKLHDDEAMETEKPLLPSQPAVSPQASTPVSRSTPVFTPGSLPIPSQPEFSHDIFIPSPSLEEPSDDVKKGGGLHSSSLTVECSKTSESEPKNFTDDLGLSMTGDSCKLMLSTSEYSQSSKMESLGSPRTEEDRENTQIDDTEPLSPVSNSKLPADSENVLVTPSQDDQVEMSQNVDKAKEDETEDRGDCKGREDAVAEDVCIDLTCDSGSQAVPSPATRSEALSSVLDQEEAMDTKEHHPEEGFSGSEVEEVPETPCGSHREEPKEEPMESIPLHLSLTETQSEALCLQKEAPKEECPEAMEVETSVISIDSPQKLQVLDQELEHKDPDTWEEATSEDSSVVIVDVKEPSPRADVSCEPLEEVEKCSDSQSWEGVAPEEEPCAENRLDTPEEKRIECDGDSKAETTEKDAVTEDSPQPPLPSVRDEPVRPDQETQQPQVQEKESPVTVDAEVADDKQLGPEGACQQLEKAPACASQSFCESSSETPFHFTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTPI
IRESfinder result
IRESfinder score
0.556877668
IRES/non IRES
IRES
riboCIRC information
riboCIRC ID
NA
NA
Evidence
Peptide sequence:
NA
bottom of page