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mmu_circSyne2_3123
Basic information of circular RNA
PanCircBase ID:
mmu_circSyne2_3123
mm39_Chr. Position ID:
chr12|75955641|75981397|+
Gene name:
Syne2
Transcript:
ENSMUST00000044217.16
CircRNA type:
Exonic circular (circ)RNA
Exon/Intron count:
18
Exon/intron indexes:
15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30,31,32
Exon/intron offsets:
0,308,2148,3438,6321,9646,10098,12247,14057,16401,16764,17588,18515,20390,20833,21698,24970,25605
Genomic length:
25756
Exon/intron sizes in nt:
7,91,88,16,51,20,17,41,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,000
Flanking exon/introns:
chr12:75953647-75955641|chr12:75981397-75984101
Splice length:
3123
Other database IDs:
CIRCpedia: MMU_CIRCpedia_29179
Human Ortholog IDs:
Mature spliced Sequence:
AAATTTACTGGAGAAAAAAAGTTCCTAATTCAACTTGATGCTTCTTTTCAAAAATGTGAAGAAATGTATAAGAACTCGGCCAGAGAATGTGAGAGTATTAGAGAGGAGTATATGATGCTGGAAAAGAATGTTCACTCGTGCAGACAATACATCCATAACACGAAGGCCACACTGCAAAGAGCACTGATGTCTTGGGCAACTTTCGAGGAAGATCTCGCCCTACTAAAGGCTTCTTTTGACTTGACAAAGAAGGAACAAATTAAAGAGGTTCCCGTTGAGACCCTCTTGCAGTGGAACACAAAACACACATCTTTGAATGAGGTGGGGAGTTTCCTGATTGGAGTCAGCAGTAGAGAAGTTGCCGCATCTATTTCTAAAGAACTGAGAAGGCTCAATAAAAGATGGAGAAAGTTCATCACCAAAACTCCACTTCTGAAACTGCCACTCGTGAAAATTCAGGACCAGCCCCCTGGGAACAGTTCTGGAACGAGTCTGTCTAAGGAGTCAGCTATGGCAGCAGAGCCTGGTGGAAGCCGTGGTGAGGATGTAAAGGCTGCGGAAAAGCAGGAAGTAGAAGACGAAGAGTCAGCCGGACAATTGAAAGTGAACGAAGAAGTTGAAGGACTCATCAAGCAGGTGACAATCTGGGAGTCACAAACCAAATCCATCTTGGATCTCCTCCAACATGGAGACCATGCCGATGGCTCCTCAGCAGACACCTTGCAGCATCTTATTGCTAAAGGCTCTGTGTATGAGGAACTTCTGGCCAGAACCGAAGATACTTTACAGATGGATGTTCAAAGTCCTTCGAACCTGGAGCCCTTCCAAAATGTCCTCAGAGCTGGCCTTCAGGCAAAGATCCAAGAAGCTAAACAAGGAGTTCAGATCACCATGGTAGAATTGTCTGCAGTGTTGAAGAACTTAAGTGATGAACCACTGGAGCTAGACCTGGGGCTAAAGGTGGAGGAAGCGCAGAAGGAGCTGGAGGTCTCCATCTTGAGAGCCGAGCAGTTACTCGGGCAAAGAGAGCGCCCTGGTGGATTCCTCTTGAAGTACAAGGAAGCATTGGAAATTCTTAATACCAATAGTCTGGCCAAGTATCTTCGAGCTGTTGAAGAACTGAAGCGTACTGTCCCCGGTGGTGCGAAGCTGCAGCTGGAAGAACAGAGTCGAGTCGCAAGTGCCAAGTGGGAGCCGCTCCGTCATGAAATTTCTTTGTATCTCCAACAACTAAAAATAGCTATTGAAGAAGAAAAGCTTAGAGACAATATTGCGAGACTTGAAAAGCAAATAAATAAAGAAAAGAAGCTTATCCGGAGAGGCAGGACCAGGGGCCTCCGCAAGGAGCACGAGGCTTGCTTGTCTCCGGAAAGCATCAAGTGCCAGCTAGAACACCATGTGGGTGTCTTGAGGGTGCTGTGCGAGGAGCTGACATCACCAGAGGATCAACAAGAATTGAAGAGAGCACTCCGAGATTACGAACAAAAGATAGCGAGACTTCTGAAATGTGCTTCTGAGATTCACACAACCCTGCAGTCCTCCCAGGGAGGTGCATTGGAGGAGAGGAGTGCCTTGATCACAACTGAGAATGGCAGAAGGGATGCCGATGGCGAGGTACCACTTGAGATACCAGACAACCAGCTGTCAACTGAAAAGGCGATGGAACCCATTAAGAATTTTAGCCAGACATCAGAATTAAAGCCTCAGCAAGAAGAAAGCATTATGGAGAAGGAAGGAAAGGATTGCAGCGCCTCTCTAAGTGACTTACAGGAGAGGTATGACACACAAAGGGGGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACTTTGCCAGTGAGCAGGAGAGGAGCAGCGCCTGCCTGCAGAGTAAACTGGCAGAACTGCAGGTCTTACTGGCTGACACTGATGCTCACTGGGAGAAGTTTGAAATCACTTCACTGAATTTAAGAAGACTGATGAGCGACGCGGAGAAGCCTGTGCTTAACCAGGAGAGAGACTTATTAAAGGGGAATGAACAGGTTCTTCACGGGCTTCTTAACACCAGAATGGAGTCACTGGAGATGGCGCTGCAGATAGTACTTCCTCTGGAGAAGGAGTGTTCTCTCCTGTGTGCCTCTGACCTGCCCCTCTGCACAGTGGCTGTCCAGGACCTGCATCCTGTTGAGATTGATGGTGTCTATCAGAACCTGCGGGATATCCGAGATTCCATCGCAAAGCAGATCAGAGTCTGTACCAGTTTGGAGGAGCCGAGTAACTCTGTACCAAGGGAGTTACACACACTAGATCAGTGTGCGATCCAGGACATTGTGCTGAAGTGCAGACTCCAGCTGGAGACCATGAACCAGAAGGTAGAGATGAGGGAGGATGCCCTGGATGCTCTGGAAGGGTTTTTGGCATCTCTGAGAGCAGCTAAGCTCTCTGCTGAGCTCCCTGCAGACCGTCCTGCCCCGAAAGCACCAGAAGTGCTGAGTGAAGACATTCTCCTGATGAAAGAGAAGGCCGGGCCTTTGGATGAACGCCTGAGGACACTTGGCATAAACATTAAGGATGCCGAGGGAGGGGAGAATACCACCTGTGAAAGACTGGTCGGTGCATTGTCAGTAAACTTAGTGGCCATGGATGGCCAGAGTAAAGAGGAAGGACCTCCTGAGGACAAGAAGTTACTGGAAGCTTGTAGTTCCAAAAATCTCGAGCTCTTTAAAAACATTCAAGACCTCCAGAATCAGATCAGTAAAATTGGTCTTAAGGATCCTACTGCTCCAGCCGTGAAGCATCGGAAAAAGTCATTACTCAGGCTGGATAAGGACCTAGATGGATTGGAAGAAGAAAAGGTGCGCATACAAAAAATAGCTGGCTCTCTCCCACGATTCAAGGATGGCAGTGAGAAAAACGTGATTCAACAGTGTGAAGACACAGCAGCCTTGTGGGAGAGTACGAAAGCTTCTGTCACAGAGAGCCTTGAACAGTGTGGAAGTGCTCTGGAGCTCTTACGACAATATCAGAATATTAAAAACAACTTGACAGCTTTGATTCAGAAGGAAGAGGGCATCATCTCCCAGCAAGCTTCCTACATGGGAAAGGACAACCTGAAGAAGAAGATAGCCGAG
Divergent primers for circular RNA PCR
Primer Set-1
Forward primer
Tm
Reverse primer
Tm
Product size
TCATCTCCCAGCAAGCTTCC
59.75
CTCACATTCTCTGGCCGAGT
59.47
152
Primer Set-2
Forward primer
Tm
Reverse primer
Tm
Product size
TCATCTCCCAGCAAGCTTCC
59.75
ACTCTCACATTCTCTGGCCG
59.47
155
PCR template sequence:
TAAAAACAACTTGACAGCTTTGATTCAGAAGGAAGAGGGCATCATCTCCCAGCAAGCTTCCTACATGGGAAAGGACAACCTGAAGAAGAAGATAGCCGAGAAATTTACTGGAGAAAAAAAGTTCCTAATTCAACTTGATGCTTCTTTTCAAAAATGTGAAGAAATGTATAAGAACTCGGCCAGAGAATGTGAGAGTATTA
Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs
31
Interacting miRNAs (#binding sites)
mmu-miR-216a-5p(2), mmu-miR-185-5p(2), mmu-miR-149-5p(2), mmu-miR-207(2), mmu-miR-140-5p(1), mmu-miR-200a-3p(1), mmu-miR-141-3p(1), mmu-miR-375-3p(1), mmu-miR-298-5p(1), mmu-miR-324-5p(1), mmu-miR-23a-3p(1), mmu-miR-143-3p(1), mmu-miR-136-5p(1), mmu-miR-434-5p(1), mmu-miR-431-5p(1), mmu-miR-501-3p(1), mmu-miR-96-5p(1), mmu-miR-182-5p(1), mmu-miR-382-5p(1), mmu-miR-362-5p(1), mmu-miR-342-5p(1), mmu-miR-224-5p(1), mmu-miR-27a-5p(1), mmu-miR-499-5p(1), mmu-miR-325-3p(1), mmu-miR-29b-2-5p(1), mmu-miR-1187(1), mmu-miR-129-5p(1), mmu-miR-540-3p(1), mmu-miR-296-3p(1), mmu-miR-338-3p(1)
siRNAs for circular RNA silencing
Junction sequence
GAAGATAGCCGAGAAATTTACTGGAG
siRNA sets
TAAATTTCTCGGCTATCTT, AAATTTCTCGGCTATCTTC, GTAAATTTCTCGGCTATCT
Protein-coding potential of circular RNAs
CPAT analysis
CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length
CIRCSYNE2_3123_ORF_1
1.1074
0.251332638
1
6183
ORF sequence:
ATGTATAAGAACTCGGCCAGAGAATGTGAGAGTATTAGAGAGGAGTATATGATGCTGGAAAAGAATGTTCACTCGTGCAGACAATACATCCATAACACGAAGGCCACACTGCAAAGAGCACTGATGTCTTGGGCAACTTTCGAGGAAGATCTCGCCCTACTAAAGGCTTCTTTTGACTTGACAAAGAAGGAACAAATTAAAGAGGTTCCCGTTGAGACCCTCTTGCAGTGGAACACAAAACACACATCTTTGAATGAGGTGGGGAGTTTCCTGATTGGAGTCAGCAGTAGAGAAGTTGCCGCATCTATTTCTAAAGAACTGAGAAGGCTCAATAAAAGATGGAGAAAGTTCATCACCAAAACTCCACTTCTGAAACTGCCACTCGTGAAAATTCAGGACCAGCCCCCTGGGAACAGTTCTGGAACGAGTCTGTCTAAGGAGTCAGCTATGGCAGCAGAGCCTGGTGGAAGCCGTGGTGAGGATGTAAAGGCTGCGGAAAAGCAGGAAGTAGAAGACGAAGAGTCAGCCGGACAATTGAAAGTGAACGAAGAAGTTGAAGGACTCATCAAGCAGGTGACAATCTGGGAGTCACAAACCAAATCCATCTTGGATCTCCTCCAACATGGAGACCATGCCGATGGCTCCTCAGCAGACACCTTGCAGCATCTTATTGCTAAAGGCTCTGTGTATGAGGAACTTCTGGCCAGAACCGAAGATACTTTACAGATGGATGTTCAAAGTCCTTCGAACCTGGAGCCCTTCCAAAATGTCCTCAGAGCTGGCCTTCAGGCAAAGATCCAAGAAGCTAAACAAGGAGTTCAGATCACCATGGTAGAATTGTCTGCAGTGTTGAAGAACTTAAGTGATGAACCACTGGAGCTAGACCTGGGGCTAAAGGTGGAGGAAGCGCAGAAGGAGCTGGAGGTCTCCATCTTGAGAGCCGAGCAGTTACTCGGGCAAAGAGAGCGCCCTGGTGGATTCCTCTTGAAGTACAAGGAAGCATTGGAAATTCTTAATACCAATAGTCTGGCCAAGTATCTTCGAGCTGTTGAAGAACTGAAGCGTACTGTCCCCGGTGGTGCGAAGCTGCAGCTGGAAGAACAGAGTCGAGTCGCAAGTGCCAAGTGGGAGCCGCTCCGTCATGAAATTTCTTTGTATCTCCAACAACTAAAAATAGCTATTGAAGAAGAAAAGCTTAGAGACAATATTGCGAGACTTGAAAAGCAAATAAATAAAGAAAAGAAGCTTATCCGGAGAGGCAGGACCAGGGGCCTCCGCAAGGAGCACGAGGCTTGCTTGTCTCCGGAAAGCATCAAGTGCCAGCTAGAACACCATGTGGGTGTCTTGAGGGTGCTGTGCGAGGAGCTGACATCACCAGAGGATCAACAAGAATTGAAGAGAGCACTCCGAGATTACGAACAAAAGATAGCGAGACTTCTGAAATGTGCTTCTGAGATTCACACAACCCTGCAGTCCTCCCAGGGAGGTGCATTGGAGGAGAGGAGTGCCTTGATCACAACTGAGAATGGCAGAAGGGATGCCGATGGCGAGGTACCACTTGAGATACCAGACAACCAGCTGTCAACTGAAAAGGCGATGGAACCCATTAAGAATTTTAGCCAGACATCAGAATTAAAGCCTCAGCAAGAAGAAAGCATTATGGAGAAGGAAGGAAAGGATTGCAGCGCCTCTCTAAGTGACTTACAGGAGAGGTATGACACACAAAGGGGGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACTTTGCCAGTGAGCAGGAGAGGAGCAGCGCCTGCCTGCAGAGTAAACTGGCAGAACTGCAGGTCTTACTGGCTGACACTGATGCTCACTGGGAGAAGTTTGAAATCACTTCACTGAATTTAAGAAGACTGATGAGCGACGCGGAGAAGCCTGTGCTTAACCAGGAGAGAGACTTATTAAAGGGGAATGAACAGGTTCTTCACGGGCTTCTTAACACCAGAATGGAGTCACTGGAGATGGCGCTGCAGATAGTACTTCCTCTGGAGAAGGAGTGTTCTCTCCTGTGTGCCTCTGACCTGCCCCTCTGCACAGTGGCTGTCCAGGACCTGCATCCTGTTGAGATTGATGGTGTCTATCAGAACCTGCGGGATATCCGAGATTCCATCGCAAAGCAGATCAGAGTCTGTACCAGTTTGGAGGAGCCGAGTAACTCTGTACCAAGGGAGTTACACACACTAGATCAGTGTGCGATCCAGGACATTGTGCTGAAGTGCAGACTCCAGCTGGAGACCATGAACCAGAAGGTAGAGATGAGGGAGGATGCCCTGGATGCTCTGGAAGGGTTTTTGGCATCTCTGAGAGCAGCTAAGCTCTCTGCTGAGCTCCCTGCAGACCGTCCTGCCCCGAAAGCACCAGAAGTGCTGAGTGAAGACATTCTCCTGATGAAAGAGAAGGCCGGGCCTTTGGATGAACGCCTGAGGACACTTGGCATAAACATTAAGGATGCCGAGGGAGGGGAGAATACCACCTGTGAAAGACTGGTCGGTGCATTGTCAGTAAACTTAGTGGCCATGGATGGCCAGAGTAAAGAGGAAGGACCTCCTGAGGACAAGAAGTTACTGGAAGCTTGTAGTTCCAAAAATCTCGAGCTCTTTAAAAACATTCAAGACCTCCAGAATCAGATCAGTAAAATTGGTCTTAAGGATCCTACTGCTCCAGCCGTGAAGCATCGGAAAAAGTCATTACTCAGGCTGGATAAGGACCTAGATGGATTGGAAGAAGAAAAGGTGCGCATACAAAAAATAGCTGGCTCTCTCCCACGATTCAAGGATGGCAGTGAGAAAAACGTGATTCAACAGTGTGAAGACACAGCAGCCTTGTGGGAGAGTACGAAAGCTTCTGTCACAGAGAGCCTTGAACAGTGTGGAAGTGCTCTGGAGCTCTTACGACAATATCAGAATATTAAAAACAACTTGACAGCTTTGATTCAGAAGGAAGAGGGCATCATCTCCCAGCAAGCTTCCTACATGGGAAAGGACAACCTGAAGAAGAAGATAGCCGAGAAATTTACTGGAGAAAAAAAGTTCCTAATTCAACTTGATGCTTCTTTTCAAAAATGTGAAGAAATGTATAAGAACTCGGCCAGAGAATGTGAGAGTATTAGAGAGGAGTATATGATGCTGGAAAAGAATGTTCACTCGTGCAGACAATACATCCATAACACGAAGGCCACACTGCAAAGAGCACTGATGTCTTGGGCAACTTTCGAGGAAGATCTCGCCCTACTAAAGGCTTCTTTTGACTTGACAAAGAAGGAACAAATTAAAGAGGTTCCCGTTGAGACCCTCTTGCAGTGGAACACAAAACACACATCTTTGAATGAGGTGGGGAGTTTCCTGATTGGAGTCAGCAGTAGAGAAGTTGCCGCATCTATTTCTAAAGAACTGAGAAGGCTCAATAAAAGATGGAGAAAGTTCATCACCAAAACTCCACTTCTGAAACTGCCACTCGTGAAAATTCAGGACCAGCCCCCTGGGAACAGTTCTGGAACGAGTCTGTCTAAGGAGTCAGCTATGGCAGCAGAGCCTGGTGGAAGCCGTGGTGAGGATGTAAAGGCTGCGGAAAAGCAGGAAGTAGAAGACGAAGAGTCAGCCGGACAATTGAAAGTGAACGAAGAAGTTGAAGGACTCATCAAGCAGGTGACAATCTGGGAGTCACAAACCAAATCCATCTTGGATCTCCTCCAACATGGAGACCATGCCGATGGCTCCTCAGCAGACACCTTGCAGCATCTTATTGCTAAAGGCTCTGTGTATGAGGAACTTCTGGCCAGAACCGAAGATACTTTACAGATGGATGTTCAAAGTCCTTCGAACCTGGAGCCCTTCCAAAATGTCCTCAGAGCTGGCCTTCAGGCAAAGATCCAAGAAGCTAAACAAGGAGTTCAGATCACCATGGTAGAATTGTCTGCAGTGTTGAAGAACTTAAGTGATGAACCACTGGAGCTAGACCTGGGGCTAAAGGTGGAGGAAGCGCAGAAGGAGCTGGAGGTCTCCATCTTGAGAGCCGAGCAGTTACTCGGGCAAAGAGAGCGCCCTGGTGGATTCCTCTTGAAGTACAAGGAAGCATTGGAAATTCTTAATACCAATAGTCTGGCCAAGTATCTTCGAGCTGTTGAAGAACTGAAGCGTACTGTCCCCGGTGGTGCGAAGCTGCAGCTGGAAGAACAGAGTCGAGTCGCAAGTGCCAAGTGGGAGCCGCTCCGTCATGAAATTTCTTTGTATCTCCAACAACTAAAAATAGCTATTGAAGAAGAAAAGCTTAGAGACAATATTGCGAGACTTGAAAAGCAAATAAATAAAGAAAAGAAGCTTATCCGGAGAGGCAGGACCAGGGGCCTCCGCAAGGAGCACGAGGCTTGCTTGTCTCCGGAAAGCATCAAGTGCCAGCTAGAACACCATGTGGGTGTCTTGAGGGTGCTGTGCGAGGAGCTGACATCACCAGAGGATCAACAAGAATTGAAGAGAGCACTCCGAGATTACGAACAAAAGATAGCGAGACTTCTGAAATGTGCTTCTGAGATTCACACAACCCTGCAGTCCTCCCAGGGAGGTGCATTGGAGGAGAGGAGTGCCTTGATCACAACTGAGAATGGCAGAAGGGATGCCGATGGCGAGGTACCACTTGAGATACCAGACAACCAGCTGTCAACTGAAAAGGCGATGGAACCCATTAAGAATTTTAGCCAGACATCAGAATTAAAGCCTCAGCAAGAAGAAAGCATTATGGAGAAGGAAGGAAAGGATTGCAGCGCCTCTCTAAGTGACTTACAGGAGAGGTATGACACACAAAGGGGGCTTCTTGAGCAACACCTGCAAGACAGCAAATCCAGGGTGACGTCTGACTTTGCCAGTGAGCAGGAGAGGAGCAGCGCCTGCCTGCAGAGTAAACTGGCAGAACTGCAGGTCTTACTGGCTGACACTGATGCTCACTGGGAGAAGTTTGAAATCACTTCACTGAATTTAAGAAGACTGATGAGCGACGCGGAGAAGCCTGTGCTTAACCAGGAGAGAGACTTATTAAAGGGGAATGAACAGGTTCTTCACGGGCTTCTTAACACCAGAATGGAGTCACTGGAGATGGCGCTGCAGATAGTACTTCCTCTGGAGAAGGAGTGTTCTCTCCTGTGTGCCTCTGACCTGCCCCTCTGCACAGTGGCTGTCCAGGACCTGCATCCTGTTGAGATTGATGGTGTCTATCAGAACCTGCGGGATATCCGAGATTCCATCGCAAAGCAGATCAGAGTCTGTACCAGTTTGGAGGAGCCGAGTAACTCTGTACCAAGGGAGTTACACACACTAGATCAGTGTGCGATCCAGGACATTGTGCTGAAGTGCAGACTCCAGCTGGAGACCATGAACCAGAAGGTAGAGATGAGGGAGGATGCCCTGGATGCTCTGGAAGGGTTTTTGGCATCTCTGAGAGCAGCTAAGCTCTCTGCTGAGCTCCCTGCAGACCGTCCTGCCCCGAAAGCACCAGAAGTGCTGAGTGAAGACATTCTCCTGATGAAAGAGAAGGCCGGGCCTTTGGATGAACGCCTGAGGACACTTGGCATAAACATTAAGGATGCCGAGGGAGGGGAGAATACCACCTGTGAAAGACTGGTCGGTGCATTGTCAGTAAACTTAGTGGCCATGGATGGCCAGAGTAAAGAGGAAGGACCTCCTGAGGACAAGAAGTTACTGGAAGCTTGTAGTTCCAAAAATCTCGAGCTCTTTAAAAACATTCAAGACCTCCAGAATCAGATCAGTAAAATTGGTCTTAAGGATCCTACTGCTCCAGCCGTGAAGCATCGGAAAAAGTCATTACTCAGGCTGGATAAGGACCTAGATGGATTGGAAGAAGAAAAGGTGCGCATACAAAAAATAGCTGGCTCTCTCCCACGATTCAAGGATGGCAGTGAGAAAAACGTGATTCAACAGTGTGAAGACACAGCAGCCTTGTGGGAGAGTACGAAAGCTTCTGTCACAGAGAGCCTTGAACAGTGTGGAAGTGCTCTGGAGCTCTTACGACAATATCAGAATATTAAAAACAACTTGACAGCTTTGATTCAGAAGGAAGAGGGCATCATCTCCCAGCAAGCTTCCTACATGGGAAAGGACAACCTGAAGAAGAAGATAGCCGAG
Peptide sequence:
MYKNSARECESIREEYMMLEKNVHSCRQYIHNTKATLQRALMSWATFEEDLALLKASFDLTKKEQIKEVPVETLLQWNTKHTSLNEVGSFLIGVSSREVAASISKELRRLNKRWRKFITKTPLLKLPLVKIQDQPPGNSSGTSLSKESAMAAEPGGSRGEDVKAAEKQEVEDEESAGQLKVNEEVEGLIKQVTIWESQTKSILDLLQHGDHADGSSADTLQHLIAKGSVYEELLARTEDTLQMDVQSPSNLEPFQNVLRAGLQAKIQEAKQGVQITMVELSAVLKNLSDEPLELDLGLKVEEAQKELEVSILRAEQLLGQRERPGGFLLKYKEALEILNTNSLAKYLRAVEELKRTVPGGAKLQLEEQSRVASAKWEPLRHEISLYLQQLKIAIEEEKLRDNIARLEKQINKEKKLIRRGRTRGLRKEHEACLSPESIKCQLEHHVGVLRVLCEELTSPEDQQELKRALRDYEQKIARLLKCASEIHTTLQSSQGGALEERSALITTENGRRDADGEVPLEIPDNQLSTEKAMEPIKNFSQTSELKPQQEESIMEKEGKDCSASLSDLQERYDTQRGLLEQHLQDSKSRVTSDFASEQERSSACLQSKLAELQVLLADTDAHWEKFEITSLNLRRLMSDAEKPVLNQERDLLKGNEQVLHGLLNTRMESLEMALQIVLPLEKECSLLCASDLPLCTVAVQDLHPVEIDGVYQNLRDIRDSIAKQIRVCTSLEEPSNSVPRELHTLDQCAIQDIVLKCRLQLETMNQKVEMREDALDALEGFLASLRAAKLSAELPADRPAPKAPEVLSEDILLMKEKAGPLDERLRTLGINIKDAEGGENTTCERLVGALSVNLVAMDGQSKEEGPPEDKKLLEACSSKNLELFKNIQDLQNQISKIGLKDPTAPAVKHRKKSLLRLDKDLDGLEEEKVRIQKIAGSLPRFKDGSEKNVIQQCEDTAALWESTKASVTESLEQCGSALELLRQYQNIKNNLTALIQKEEGIISQQASYMGKDNLKKKIAEKFTGEKKFLIQLDASFQKCEEMYKNSARECESIREEYMMLEKNVHSCRQYIHNTKATLQRALMSWATFEEDLALLKASFDLTKKEQIKEVPVETLLQWNTKHTSLNEVGSFLIGVSSREVAASISKELRRLNKRWRKFITKTPLLKLPLVKIQDQPPGNSSGTSLSKESAMAAEPGGSRGEDVKAAEKQEVEDEESAGQLKVNEEVEGLIKQVTIWESQTKSILDLLQHGDHADGSSADTLQHLIAKGSVYEELLARTEDTLQMDVQSPSNLEPFQNVLRAGLQAKIQEAKQGVQITMVELSAVLKNLSDEPLELDLGLKVEEAQKELEVSILRAEQLLGQRERPGGFLLKYKEALEILNTNSLAKYLRAVEELKRTVPGGAKLQLEEQSRVASAKWEPLRHEISLYLQQLKIAIEEEKLRDNIARLEKQINKEKKLIRRGRTRGLRKEHEACLSPESIKCQLEHHVGVLRVLCEELTSPEDQQELKRALRDYEQKIARLLKCASEIHTTLQSSQGGALEERSALITTENGRRDADGEVPLEIPDNQLSTEKAMEPIKNFSQTSELKPQQEESIMEKEGKDCSASLSDLQERYDTQRGLLEQHLQDSKSRVTSDFASEQERSSACLQSKLAELQVLLADTDAHWEKFEITSLNLRRLMSDAEKPVLNQERDLLKGNEQVLHGLLNTRMESLEMALQIVLPLEKECSLLCASDLPLCTVAVQDLHPVEIDGVYQNLRDIRDSIAKQIRVCTSLEEPSNSVPRELHTLDQCAIQDIVLKCRLQLETMNQKVEMREDALDALEGFLASLRAAKLSAELPADRPAPKAPEVLSEDILLMKEKAGPLDERLRTLGINIKDAEGGENTTCERLVGALSVNLVAMDGQSKEEGPPEDKKLLEACSSKNLELFKNIQDLQNQISKIGLKDPTAPAVKHRKKSLLRLDKDLDGLEEEKVRIQKIAGSLPRFKDGSEKNVIQQCEDTAALWESTKASVTESLEQCGSALELLRQYQNIKNNLTALIQKEEGIISQQASYMGKDNLKKKIAE
IRESfinder result
IRESfinder score
0.498432763
IRES/non IRES
non-IRES
riboCIRC information
riboCIRC ID
NA
NA
Evidence
Peptide sequence:
NA
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