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mmu_circSon_6298
Basic information of circular RNA
PanCircBase ID:
mmu_circSon_6298
mm39_Chr. Position ID:
chr16|91448517|91459149|+
Gene name:
Son
Transcript:
ENSMUST00000117633.8
CircRNA type:
Exonic circular (circ)RNA
Exon/Intron count:
3
Exon/intron indexes:
2,3,4
Exon/intron offsets:
0,2981,10471
Genomic length:
10632
Exon/intron sizes in nt:
1,67,59,70,161
Flanking exon/introns:
chr16:91444872-91448517|chr16:91459149-91461085
Splice length:
6298
Other database IDs:
Human Ortholog IDs:
Mature spliced Sequence:
TGGAAGGAGTGAAGGCCAGCTGAATGGTGAAACAAATCCACCCATTGAAGGGAACCAGGCAGGTGACACAGCTGCCTCTGCAAGGAGTCTCCCAAATGAAGAAATAGTGCAGAAGATAGAGGAGGTCCTCTCTGGGGTCTTAGATACGGAGCTGCGGTACAAGCCCGACTTGAAAGAGGCCTCCAGAAAAAGTAGATGCGTATCTGTGCAAACAGATCCTACTGATGAAGTGCCCACCAAAAAGTCAAAGAAGCATAAAAAGCACAAAAACAAAAAGAAGAAAAAGAAGAAAGAAAAAGAAAAAAAATATAAAAGACAACCAGAAGAATCTGAGTCCAAGCTGAAATCTCATCATGATGGGAATCTAGAATCTGATTCCTTCTTAAAGTTTGATTCTGAACCTTCAGCAGCGGCACTGGAACATCCTGTAAGAGCGTTTGGCTTATCTGAGGCCAGTGAGACCGCCTTAGTGCTGGAACCTCCAGTAGTCTCAATGGAGGTTCAGGAGTCACACGTTCTAGAGACTCTGAAGCCAGCTACAAAAGCTGCAGAACTGTCAGTTGTGTCTACATCAGTAATCTCAGAGCAGTCTGAGCAGCCTATGCCAGGTATGCTGGAACCATCAATGACAAAGATCCTGGATTCCTTCACAGCAGCACCAGTGCCTATGTCAACAGCGGCGCTGAAGTCACCTGAGCCCGTTGTAACAATGTCAGTGGAATATCAGAAGTCTGTGCTGAAATCTTTGGAGACTATGCCTCCAGAGACGTCAAAGACCACGCTGGTAGAGCTTCCCATAGCAAAAGTGGTTGAGCCATCAGAAACCCTCACGATAGTGTCAGAGACACCTACTGAGGTGCACCCTGAACCAAGCCCATCAACAATGGATTTTCCAGAGTCATCTACAACTGACGTGCAAAGATTGCCAGAGCAGCCTGTAGAAGCACCATCGGAGATTGCAGATTCATCCATGACAAGACCTCAGGAGTCACTGGAGCTGCCTAAGACCACAGCGGTGGAGCTGCAGGAGTCGACGGTGGCCTCAGCTCTGGAGTTGCCGGGGCCACCTGCGACCTCCATTCTGGAGTTGCAGGGGCCCCCTGTGACTCCAGTGCCAGAGTTGCCTGGGCCCTCTGCCACCCCAGTGCCAGAGTTGTCAGGGCCCCTTTCTACCCCAGTGCCTGAGTTGCCAGGGCCCCCTGCGACAGTGGTCCCTGAGTTGCCGGGGCCCTCTGTGACACCAGTGCCACAGTTGTCGCAGGAATTGCCAGGGCCTCCAGCACCATCCATGGGGTTGGAGCCACCACAGGAGGTACCAGAGCCACCTGTGATGGCACAGGAGTTATCAGGGGTGCCTGCAGTGTCGGCAGCGATAGAGTTGACAGGGCAACCTGCAGTAACAGTAGCAATGGAGTTGACCGAACAACCTGTGACGACGACAGAGTTCGAGCAGCCTGTGGCGATGACAACGGTGGAGCATCCTGGGCATCCTGAGGTGACAACAGCTACAGGGTTGCTGGGGCAGCCAGAGGCAGCAATGGTGCTGGAGTTGCCAGGCCAGCCAGTGGCAACCACAGCGCTGGAGTTGTCTGGGCAGCCTTCGGTGACTGGGGTGCCAGAGTTGTCAGGGCTGCCTTCGGCAACTAGGGCACTGGAGTTGTCAGGGCAGTCTGTGGCAACTGGGGCATTAGAGTTGCCTGGTCAGCTCATGGCAACTGGGGCACTGGAGTTTTCGGGGCAGTCTGGGGCAGCTGGAGCACTGGAGCTTTTGGGGCAGCCCCTAGCAACGGGGGTGCTAGAGTTACCAGGGCAGCCTGGAGCGCCAGAGTTGCCTGGGCAGCCTGTGGCAACTGTGGCGCTGGAGATCTCTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAACGATGACCGTGTCGCAGTCCCTGGAGGTGCCCTCGACGACAGCGCTGGAATCCTATAATACGGTAGCACAGGAGCTGCCTACTACATTGGTGGGGGAGACTTCTGTAACAGTAGGAGTGGACCCCTTGATGGCCCAAGAATCCCATATGCTAGCTTCTAACACCATGGAGACCCATATGTTAGCATCCAATACCATGGACTCCCAGATGCTAGCATCCAACACTATGGATTCTCAGATGCTAGCATCCAATACCATGGACTCCCAGATGTTAGCCTCTAGCACCATGGACTCCCAGATGTTAGCCTCTAGCACCATGGACTCCCAGATGTTAGCAACTAGCACCATGGACTCCCAGATGTTAGCAACTAGCTCTATGGACTCCCAGATGTTAGCAACTAGCTCTATGGACTCCCAGATGTTAGCAACCAGCAGTATGGACTCCCAGATGTTAGCAACCAGCAGTATGGACTCCCAGATGTTAGCAACCAGCTCCATGGACTCCCAGATGTTAGCAACCAGCAGTATGGACTCCCAGATGTTAGCAACCAGCAGTATGGACTCCCAGATGTTAGCAACCAGTTCCATGGACTCCCAGATGTTAGCATCTGGTGCTATGGATTCTCAGATGTTAGCTTCTGGCACTATGGATGCTCAGATGTTAGCATCTGGTACTATGGATGCCCAAATGTTAGCATCTAGTACCCAGGATTCTGCTATGATGGGTTCAAAGTCTCCTGATCCCTATAGGTTAGCTCAGGATCCTTACAGATTAGCTCAGGATCCCTATAGGTTGGGTCATGACCCCTACAGGTTAGGCCATGATGCTTACAGGTTAGGACAAGACCCTTATAGATTAGGCCATGATCCCTACAGACTAACTCCGGATCCCTATAGGGTATCACCTAGGCCCTATAGAATAGCACCCAGGTCCTATAGGATAGCACCTAGGCCATACAGGTTAGCACCTAGACCCTTGATGTTAGCATCTAGACGTTCTATGATGATGTCCTATGCTGCAGAACGTTCCATGATGTCATCTTATGAGCGCTCTATGATGTCTTATGAACGCTCTATGATGTCCCCTATGGCTGAACGCTCTATGATGTCGGCCTATGAGCGCTCCATGATGTCAGCTTATGAGCGCTCCATGATGTCTCCTATGGCTGAGCGTTCTATGATGTCAGCTTATGAGCGCTCTATGATGTCAGCTTATGAGCGCTCCATGATGTCTCCTATGGCTGATCGATCCATGATGTCCATGGGTGCCGACCGGTCTATGATGTCATCGTACTCTGCAGCTGACCGGTCTATGATGTCATCGTACTCTGCAGCTGATCGATCAATGATGTCATCTTACACTGATCGATCAATGATGTCTATGGCAGCTGATTCTTACACTGATTCTTATACTGATTCCTATACGGAGGCATATATGGTGCCACCTTTGCCTCCTGAAGAGCCCCCAACAATGCCACCATTGCCACCCGAGGAACCACCAATGACACCCCCATTACCTCCTGAGGAACCACCAGAGGGTCCAGCATTATCAACAGAGCAGTCAGCATTAACAGCTGACAATACTTGGTCTACAGAGGTGACATTATCTACTGGAGAATCTCTATCACAGCCTGAGCCTCCTGTGAGTCAAAGTGAGATTTCAGAGCCTATGGCAGTACCTGCTAATTATTCAATGTCAGAATCAGAAACTTCAATGTTAGCATCAGAGGCTGTTATGACTGTTCCAGAACCTGCACGAGAGCCCGAGTCTTCAGTTACATCAGCACCAGTTGAGTCTGCTGTAGTAGCAGAACATGAAATGGTTCCAGAGAGACCGATGACTTACATGGTTTCTGAGACTACCATGTCAGTCGAGCCAGCTGTGTTAACATCAGAGGCTTCTGTTATATCAGAGACATCAGAAACATATGATTCCATGAGACCTTCAGGACATGCTATCTCAGAGGTAACTATGTCACTCTTGGAGCCAGCAGTAACTATTTCACAGCCAGCAGAGAACAGTCTAGAGCTCCCATCCATGACTGTCCCAGCACCTTCTACTATGACTACCACAGAATCTCCAGTTGTTGCTGTCACAGAAATTCCTCCTGTGGCTGTCCCAGAACCTCCCATTATGGCTGTTCCAGAACTCCCCACCATGGCTGTAGTAAAAACCCCCGCTGTGGCTGTCCCAGAACCTCTTGTGGCTGCTCCAGAGCCTCCTACCATGGCTACTCCAGAACTTTGCTCCTTATCTGTCTCAGAACCTCCTGTGGCTGTCTCGGAGCTTCCAGCTTTGGCTGACCCAGAGCATGCTATCACTGCAGTGTCAGGTGTTTCTTCCCTGGAGCCTTCTGTGCCTATTTTGGAACCAGCAGTATCAGTCCTTCAACCTGTTATGATTGTTTCAGAACCGTCTGTTCCTGTCCAGGAACCTACCGTGGCAGTGTCAGAACCTGCTGTCATAGTCTCAGAGCACACGCAAATAACATCACCTGAGATGGCTGTAGAGTCTTCACCAGTAATAGTGGACTCTAGTGTTATGTCATCACAGATTATGAAAGGAATGAATTTGCTTGGTGGTGATGAAAATCTTGGTCCAGAGGTTGGCATGCAGGAGACTCTGTTGCATCCAGGTGAAGAGCCACGTGATGGAGGACACTTGAAAAGTGACTTGTATGAAAATGAGTATGATAGAAATGCAGACCTTACTGTAAACAGTCATTTAATTGTTAAAGATGCAGAGCATAACACAGTGTGTGCTACTACCGTTGGTCCTGTTGGTGAAGCAAGTGAAGAGAAAATTTTGCCTATTAGTGAGACTAAGGAAATCACAGAATTGGCTACCTGTGCTGCCGTCAGCGAAGCTGACATAGGCAGAAGTCTGTCTTCTCAGCTTGCTCTGGAGCTGGATACAGTAGGAACTAGTAAGGGGTTTGAATTTGTCACTGCATCTGCACTCATTTCAGAGAGTAAATATGATGTTGAAGTATCTGTAACTACTCAAGATACTGAACATGACATGGTAATTTCCACCAGCCCCAGTGGTGGCAGCGAAGCAGACATAGAGGGACCTTTGCCTGCTAAAGACATTCATCTTGATTTGCCATCAACTAATTTTGTTTGTAAGGATGTAGAAGACTCGTTACCTATCAAAGAGAGTGCCCAGGCAGTGGCAGTGGCTCTTAGCCCTAAAGAGAGCAGTGAAGATACAGAAGTACCTCTTCCCAATAAAGAAATAGTTCCTGAGTCAGGATATTCTGCCAGCATTGATGAAATTAATGAAGCTGACTTAGTGAGACCATTACTTCCTAAGGACATGGAGCGTCTTACAAGCCTTAGAGCTGGCATTGAAGGACCTTTACTTGCTAGTGAGGTTGAACGTGACAAGTCAGCTGCCAGTCCAGTTGTAATTAGCATACCAGAAAGAGCTTCAGAGTCATCTTCAGAGGAAAAGGATGATTATGAAATTTTTGTCAAAGTTAAGGACACACATGAAAAAAGCAAGAAAAACAAAAACCGTGACAAAGGTGAGAAGGAGAAGAAAAGGGACTCTTCATTACGGTCTCGGAGTAAGCGTTCCAAGTCTTCTGAACATAAGTCACGCAAGCGCACCAGTGAGTCGCGTTCTAGAGCAAGGAAGAGGTCGTCCAAGTCCAAATCTCACCGTTCTCAGACACGGTCACGGTCACGCTCAAGACGCAGGAGGAGGAGTAGCCGATCAAGATCTAAGTCTAGAGGAAGACGGTCTGTATCAAAAGAGAAACGCAAAAGGTCTCCAAAGCATAGATCCAAGTCCAGGGAAAGGAAAAGGAAAAGATCAAGCTCACGAGACAACCGGAAAGCAGCTCGAGCTCGGAGTCGAACCCCGAGTCGGCGGAGTAGGAGCCACACTCCTAGTCGGAGGAGACGGTCTAGATCTGTTGGTAGAAGGAGAAGTTTTAGCATTTCCCCCAGCCGCAGGAGCCGAACCCCCAGCCGCAGGAGCAGAACCCCCAGCCGCAGGAGCCGAACCCCCAGCCGCAGGAGCCGAACCCCCAGCCGCAGGAGCCGAACCCCCAGCCGTCGGAGAAGATCACGGTCTGCGGTAAGAAGACGAAGCTTCAGTATATCACCGGTCAGATTAAGGCGATCAAGAACACCTTTGAGAAGAAGGTTTAGTAGATCTCCCATTCGGCGGAAAAGATCCAGGTCTTCAGAAAGAGGCAGATCGCCCAAACGTCTAACAGATTTGGATAAGGCTCAATTACTTGAAATAGCCAAAGCTAATGCAGCTGCCATGTGTGCTAAGGCTGGTGTTCCTTTACCACCAAACCTAAAGCCTGCACCTCCACCTACAATAGAAGAGAAAGTTGCTAAAAAGTCTGGAGGAGCTACCATAGAAGAACTAACTGAG
Divergent primers for circular RNA PCR
Primer Set-1
Forward primer
Tm
Reverse primer
Tm
Product size
AACCTAAAGCCTGCACCTCC
59.96
CCTGCCTGGTTCCCTTCAAT
59.96
147
Primer Set-2
Forward primer
Tm
Reverse primer
Tm
Product size
AACCTAAAGCCTGCACCTCC
59.96
TGCCTGGTTCCCTTCAATGG
60.25
145
PCR template sequence:
TGTTCCTTTACCACCAAACCTAAAGCCTGCACCTCCACCTACAATAGAAGAGAAAGTTGCTAAAAAGTCTGGAGGAGCTACCATAGAAGAACTAACTGAGTGGAAGGAGTGAAGGCCAGCTGAATGGTGAAACAAATCCACCCATTGAAGGGAACCAGGCAGGTGACACAGCTGCCTCTGCAAGGAGTCTCCCAAATGAA
Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs
33
Interacting miRNAs (#binding sites)
mmu-miR-7b-5p(3), mmu-miR-541-5p(3), mmu-miR-29b-3p(2), mmu-miR-298-5p(2), mmu-miR-10a-5p(2), mmu-miR-29b-2-5p(2), mmu-miR-335-3p(2), mmu-miR-1904(2), mmu-miR-155-5p(1), mmu-miR-375-3p(1), mmu-miR-103-3p(1), mmu-miR-34c-5p(1), mmu-miR-26a-5p(1), mmu-miR-211-5p(1), mmu-miR-204-5p(1), mmu-miR-29a-3p(1), mmu-miR-29c-3p(1), mmu-miR-132-3p(1), mmu-miR-320-3p(1), mmu-miR-10b-5p(1), mmu-miR-214-3p(1), mmu-miR-136-5p(1), mmu-miR-434-3p(1), mmu-miR-434-5p(1), mmu-miR-433-3p(1), mmu-miR-363-3p(1), mmu-miR-26b-5p(1), mmu-miR-107-3p(1), mmu-miR-1187(1), mmu-miR-410-3p(1), mmu-miR-207(1), mmu-miR-193b-3p(1), mmu-miR-344-3p(1)
siRNAs for circular RNA silencing
Junction sequence
AGAACTAACTGAGTGGAAGGAGTGAA
siRNA sets
TTCACTCCTTCCACTCAGT, ACTCCTTCCACTCAGTTAG, CTTCCACTCAGTTAGTTCT
Protein-coding potential of circular RNAs
CPAT analysis
CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length
CIRCSON_6298_ORF_1
0.9966
0.141180115
1
5817
ORF sequence:
ATGGAGGTTCAGGAGTCACACGTTCTAGAGACTCTGAAGCCAGCTACAAAAGCTGCAGAACTGTCAGTTGTGTCTACATCAGTAATCTCAGAGCAGTCTGAGCAGCCTATGCCAGGTATGCTGGAACCATCAATGACAAAGATCCTGGATTCCTTCACAGCAGCACCAGTGCCTATGTCAACAGCGGCGCTGAAGTCACCTGAGCCCGTTGTAACAATGTCAGTGGAATATCAGAAGTCTGTGCTGAAATCTTTGGAGACTATGCCTCCAGAGACGTCAAAGACCACGCTGGTAGAGCTTCCCATAGCAAAAGTGGTTGAGCCATCAGAAACCCTCACGATAGTGTCAGAGACACCTACTGAGGTGCACCCTGAACCAAGCCCATCAACAATGGATTTTCCAGAGTCATCTACAACTGACGTGCAAAGATTGCCAGAGCAGCCTGTAGAAGCACCATCGGAGATTGCAGATTCATCCATGACAAGACCTCAGGAGTCACTGGAGCTGCCTAAGACCACAGCGGTGGAGCTGCAGGAGTCGACGGTGGCCTCAGCTCTGGAGTTGCCGGGGCCACCTGCGACCTCCATTCTGGAGTTGCAGGGGCCCCCTGTGACTCCAGTGCCAGAGTTGCCTGGGCCCTCTGCCACCCCAGTGCCAGAGTTGTCAGGGCCCCTTTCTACCCCAGTGCCTGAGTTGCCAGGGCCCCCTGCGACAGTGGTCCCTGAGTTGCCGGGGCCCTCTGTGACACCAGTGCCACAGTTGTCGCAGGAATTGCCAGGGCCTCCAGCACCATCCATGGGGTTGGAGCCACCACAGGAGGTACCAGAGCCACCTGTGATGGCACAGGAGTTATCAGGGGTGCCTGCAGTGTCGGCAGCGATAGAGTTGACAGGGCAACCTGCAGTAACAGTAGCAATGGAGTTGACCGAACAACCTGTGACGACGACAGAGTTCGAGCAGCCTGTGGCGATGACAACGGTGGAGCATCCTGGGCATCCTGAGGTGACAACAGCTACAGGGTTGCTGGGGCAGCCAGAGGCAGCAATGGTGCTGGAGTTGCCAGGCCAGCCAGTGGCAACCACAGCGCTGGAGTTGTCTGGGCAGCCTTCGGTGACTGGGGTGCCAGAGTTGTCAGGGCTGCCTTCGGCAACTAGGGCACTGGAGTTGTCAGGGCAGTCTGTGGCAACTGGGGCATTAGAGTTGCCTGGTCAGCTCATGGCAACTGGGGCACTGGAGTTTTCGGGGCAGTCTGGGGCAGCTGGAGCACTGGAGCTTTTGGGGCAGCCCCTAGCAACGGGGGTGCTAGAGTTACCAGGGCAGCCTGGAGCGCCAGAGTTGCCTGGGCAGCCTGTGGCAACTGTGGCGCTGGAGATCTCTGTTCAGTCTGTGGTGACAACATCGGAGCTGTCAACGATGACCGTGTCGCAGTCCCTGGAGGTGCCCTCGACGACAGCGCTGGAATCCTATAATACGGTAGCACAGGAGCTGCCTACTACATTGGTGGGGGAGACTTCTGTAACAGTAGGAGTGGACCCCTTGATGGCCCAAGAATCCCATATGCTAGCTTCTAACACCATGGAGACCCATATGTTAGCATCCAATACCATGGACTCCCAGATGCTAGCATCCAACACTATGGATTCTCAGATGCTAGCATCCAATACCATGGACTCCCAGATGTTAGCCTCTAGCACCATGGACTCCCAGATGTTAGCCTCTAGCACCATGGACTCCCAGATGTTAGCAACTAGCACCATGGACTCCCAGATGTTAGCAACTAGCTCTATGGACTCCCAGATGTTAGCAACTAGCTCTATGGACTCCCAGATGTTAGCAACCAGCAGTATGGACTCCCAGATGTTAGCAACCAGCAGTATGGACTCCCAGATGTTAGCAACCAGCTCCATGGACTCCCAGATGTTAGCAACCAGCAGTATGGACTCCCAGATGTTAGCAACCAGCAGTATGGACTCCCAGATGTTAGCAACCAGTTCCATGGACTCCCAGATGTTAGCATCTGGTGCTATGGATTCTCAGATGTTAGCTTCTGGCACTATGGATGCTCAGATGTTAGCATCTGGTACTATGGATGCCCAAATGTTAGCATCTAGTACCCAGGATTCTGCTATGATGGGTTCAAAGTCTCCTGATCCCTATAGGTTAGCTCAGGATCCTTACAGATTAGCTCAGGATCCCTATAGGTTGGGTCATGACCCCTACAGGTTAGGCCATGATGCTTACAGGTTAGGACAAGACCCTTATAGATTAGGCCATGATCCCTACAGACTAACTCCGGATCCCTATAGGGTATCACCTAGGCCCTATAGAATAGCACCCAGGTCCTATAGGATAGCACCTAGGCCATACAGGTTAGCACCTAGACCCTTGATGTTAGCATCTAGACGTTCTATGATGATGTCCTATGCTGCAGAACGTTCCATGATGTCATCTTATGAGCGCTCTATGATGTCTTATGAACGCTCTATGATGTCCCCTATGGCTGAACGCTCTATGATGTCGGCCTATGAGCGCTCCATGATGTCAGCTTATGAGCGCTCCATGATGTCTCCTATGGCTGAGCGTTCTATGATGTCAGCTTATGAGCGCTCTATGATGTCAGCTTATGAGCGCTCCATGATGTCTCCTATGGCTGATCGATCCATGATGTCCATGGGTGCCGACCGGTCTATGATGTCATCGTACTCTGCAGCTGACCGGTCTATGATGTCATCGTACTCTGCAGCTGATCGATCAATGATGTCATCTTACACTGATCGATCAATGATGTCTATGGCAGCTGATTCTTACACTGATTCTTATACTGATTCCTATACGGAGGCATATATGGTGCCACCTTTGCCTCCTGAAGAGCCCCCAACAATGCCACCATTGCCACCCGAGGAACCACCAATGACACCCCCATTACCTCCTGAGGAACCACCAGAGGGTCCAGCATTATCAACAGAGCAGTCAGCATTAACAGCTGACAATACTTGGTCTACAGAGGTGACATTATCTACTGGAGAATCTCTATCACAGCCTGAGCCTCCTGTGAGTCAAAGTGAGATTTCAGAGCCTATGGCAGTACCTGCTAATTATTCAATGTCAGAATCAGAAACTTCAATGTTAGCATCAGAGGCTGTTATGACTGTTCCAGAACCTGCACGAGAGCCCGAGTCTTCAGTTACATCAGCACCAGTTGAGTCTGCTGTAGTAGCAGAACATGAAATGGTTCCAGAGAGACCGATGACTTACATGGTTTCTGAGACTACCATGTCAGTCGAGCCAGCTGTGTTAACATCAGAGGCTTCTGTTATATCAGAGACATCAGAAACATATGATTCCATGAGACCTTCAGGACATGCTATCTCAGAGGTAACTATGTCACTCTTGGAGCCAGCAGTAACTATTTCACAGCCAGCAGAGAACAGTCTAGAGCTCCCATCCATGACTGTCCCAGCACCTTCTACTATGACTACCACAGAATCTCCAGTTGTTGCTGTCACAGAAATTCCTCCTGTGGCTGTCCCAGAACCTCCCATTATGGCTGTTCCAGAACTCCCCACCATGGCTGTAGTAAAAACCCCCGCTGTGGCTGTCCCAGAACCTCTTGTGGCTGCTCCAGAGCCTCCTACCATGGCTACTCCAGAACTTTGCTCCTTATCTGTCTCAGAACCTCCTGTGGCTGTCTCGGAGCTTCCAGCTTTGGCTGACCCAGAGCATGCTATCACTGCAGTGTCAGGTGTTTCTTCCCTGGAGCCTTCTGTGCCTATTTTGGAACCAGCAGTATCAGTCCTTCAACCTGTTATGATTGTTTCAGAACCGTCTGTTCCTGTCCAGGAACCTACCGTGGCAGTGTCAGAACCTGCTGTCATAGTCTCAGAGCACACGCAAATAACATCACCTGAGATGGCTGTAGAGTCTTCACCAGTAATAGTGGACTCTAGTGTTATGTCATCACAGATTATGAAAGGAATGAATTTGCTTGGTGGTGATGAAAATCTTGGTCCAGAGGTTGGCATGCAGGAGACTCTGTTGCATCCAGGTGAAGAGCCACGTGATGGAGGACACTTGAAAAGTGACTTGTATGAAAATGAGTATGATAGAAATGCAGACCTTACTGTAAACAGTCATTTAATTGTTAAAGATGCAGAGCATAACACAGTGTGTGCTACTACCGTTGGTCCTGTTGGTGAAGCAAGTGAAGAGAAAATTTTGCCTATTAGTGAGACTAAGGAAATCACAGAATTGGCTACCTGTGCTGCCGTCAGCGAAGCTGACATAGGCAGAAGTCTGTCTTCTCAGCTTGCTCTGGAGCTGGATACAGTAGGAACTAGTAAGGGGTTTGAATTTGTCACTGCATCTGCACTCATTTCAGAGAGTAAATATGATGTTGAAGTATCTGTAACTACTCAAGATACTGAACATGACATGGTAATTTCCACCAGCCCCAGTGGTGGCAGCGAAGCAGACATAGAGGGACCTTTGCCTGCTAAAGACATTCATCTTGATTTGCCATCAACTAATTTTGTTTGTAAGGATGTAGAAGACTCGTTACCTATCAAAGAGAGTGCCCAGGCAGTGGCAGTGGCTCTTAGCCCTAAAGAGAGCAGTGAAGATACAGAAGTACCTCTTCCCAATAAAGAAATAGTTCCTGAGTCAGGATATTCTGCCAGCATTGATGAAATTAATGAAGCTGACTTAGTGAGACCATTACTTCCTAAGGACATGGAGCGTCTTACAAGCCTTAGAGCTGGCATTGAAGGACCTTTACTTGCTAGTGAGGTTGAACGTGACAAGTCAGCTGCCAGTCCAGTTGTAATTAGCATACCAGAAAGAGCTTCAGAGTCATCTTCAGAGGAAAAGGATGATTATGAAATTTTTGTCAAAGTTAAGGACACACATGAAAAAAGCAAGAAAAACAAAAACCGTGACAAAGGTGAGAAGGAGAAGAAAAGGGACTCTTCATTACGGTCTCGGAGTAAGCGTTCCAAGTCTTCTGAACATAAGTCACGCAAGCGCACCAGTGAGTCGCGTTCTAGAGCAAGGAAGAGGTCGTCCAAGTCCAAATCTCACCGTTCTCAGACACGGTCACGGTCACGCTCAAGACGCAGGAGGAGGAGTAGCCGATCAAGATCTAAGTCTAGAGGAAGACGGTCTGTATCAAAAGAGAAACGCAAAAGGTCTCCAAAGCATAGATCCAAGTCCAGGGAAAGGAAAAGGAAAAGATCAAGCTCACGAGACAACCGGAAAGCAGCTCGAGCTCGGAGTCGAACCCCGAGTCGGCGGAGTAGGAGCCACACTCCTAGTCGGAGGAGACGGTCTAGATCTGTTGGTAGAAGGAGAAGTTTTAGCATTTCCCCCAGCCGCAGGAGCCGAACCCCCAGCCGCAGGAGCAGAACCCCCAGCCGCAGGAGCCGAACCCCCAGCCGCAGGAGCCGAACCCCCAGCCGCAGGAGCCGAACCCCCAGCCGTCGGAGAAGATCACGGTCTGCGGTAAGAAGACGAAGCTTCAGTATATCACCGGTCAGATTAAGGCGATCAAGAACACCTTTGAGAAGAAGGTTTAGTAGATCTCCCATTCGGCGGAAAAGATCCAGGTCTTCAGAAAGAGGCAGATCGCCCAAACGTCTAACAGATTTGGATAAGGCTCAATTACTTGAAATAGCCAAAGCTAATGCAGCTGCCATGTGTGCTAAGGCTGGTGTTCCTTTACCACCAAACCTAAAGCCTGCACCTCCACCTACAATAGAAGAGAAAGTTGCTAAAAAGTCTGGAGGAGCTACCATAGAAGAACTAACTGAGTGGAAGGAGTGA
Peptide sequence:
MEVQESHVLETLKPATKAAELSVVSTSVISEQSEQPMPGMLEPSMTKILDSFTAAPVPMSTAALKSPEPVVTMSVEYQKSVLKSLETMPPETSKTTLVELPIAKVVEPSETLTIVSETPTEVHPEPSPSTMDFPESSTTDVQRLPEQPVEAPSEIADSSMTRPQESLELPKTTAVELQESTVASALELPGPPATSILELQGPPVTPVPELPGPSATPVPELSGPLSTPVPELPGPPATVVPELPGPSVTPVPQLSQELPGPPAPSMGLEPPQEVPEPPVMAQELSGVPAVSAAIELTGQPAVTVAMELTEQPVTTTEFEQPVAMTTVEHPGHPEVTTATGLLGQPEAAMVLELPGQPVATTALELSGQPSVTGVPELSGLPSATRALELSGQSVATGALELPGQLMATGALEFSGQSGAAGALELLGQPLATGVLELPGQPGAPELPGQPVATVALEISVQSVVTTSELSTMTVSQSLEVPSTTALESYNTVAQELPTTLVGETSVTVGVDPLMAQESHMLASNTMETHMLASNTMDSQMLASNTMDSQMLASNTMDSQMLASSTMDSQMLASSTMDSQMLATSTMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLATSSMDSQMLASGAMDSQMLASGTMDAQMLASGTMDAQMLASSTQDSAMMGSKSPDPYRLAQDPYRLAQDPYRLGHDPYRLGHDAYRLGQDPYRLGHDPYRLTPDPYRVSPRPYRIAPRSYRIAPRPYRLAPRPLMLASRRSMMMSYAAERSMMSSYERSMMSYERSMMSPMAERSMMSAYERSMMSAYERSMMSPMAERSMMSAYERSMMSAYERSMMSPMADRSMMSMGADRSMMSSYSAADRSMMSSYSAADRSMMSSYTDRSMMSMAADSYTDSYTDSYTEAYMVPPLPPEEPPTMPPLPPEEPPMTPPLPPEEPPEGPALSTEQSALTADNTWSTEVTLSTGESLSQPEPPVSQSEISEPMAVPANYSMSESETSMLASEAVMTVPEPAREPESSVTSAPVESAVVAEHEMVPERPMTYMVSETTMSVEPAVLTSEASVISETSETYDSMRPSGHAISEVTMSLLEPAVTISQPAENSLELPSMTVPAPSTMTTTESPVVAVTEIPPVAVPEPPIMAVPELPTMAVVKTPAVAVPEPLVAAPEPPTMATPELCSLSVSEPPVAVSELPALADPEHAITAVSGVSSLEPSVPILEPAVSVLQPVMIVSEPSVPVQEPTVAVSEPAVIVSEHTQITSPEMAVESSPVIVDSSVMSSQIMKGMNLLGGDENLGPEVGMQETLLHPGEEPRDGGHLKSDLYENEYDRNADLTVNSHLIVKDAEHNTVCATTVGPVGEASEEKILPISETKEITELATCAAVSEADIGRSLSSQLALELDTVGTSKGFEFVTASALISESKYDVEVSVTTQDTEHDMVISTSPSGGSEADIEGPLPAKDIHLDLPSTNFVCKDVEDSLPIKESAQAVAVALSPKESSEDTEVPLPNKEIVPESGYSASIDEINEADLVRPLLPKDMERLTSLRAGIEGPLLASEVERDKSAASPVVISIPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSAVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEELTEWKE
IRESfinder result
IRESfinder score
0.416064181
IRES/non IRES
non-IRES
riboCIRC information
riboCIRC ID
NA
NA
Evidence
Peptide sequence:
NA
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