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mmu_circPrrc2c_4730
Basic information of circular RNA
PanCircBase ID:
mmu_circPrrc2c_4730
mm39_Chr. Position ID:
chr1|162531937|162552438|-
Gene name:
Prrc2c
Transcript:
ENSMUST00000182149.8
CircRNA type:
Exonic circular (circ)RNA
Exon/Intron count:
15
Exon/intron indexes:
16,15,14,13,12,11,10,9,8,7,6,5,4,3,2
Exon/intron offsets:
0,3397,4484,5160,5914,8935,9874,11023,11217,11910,14321,16112,17061,18741,20335
Genomic length:
20501
Exon/intron sizes in nt:
22,53,20,82,59,15,85,40,00,00,00,00,00,00,00,00,00,00,00,00,000
Flanking exon/introns:
chr1:162529959-162531937|chr1:162552438-162567893
Splice length:
4730
Other database IDs:
Human Ortholog IDs:
Mature spliced Sequence:
ACTACTTTTAAGGGGTGTGTCAGGAGGTTTTGGACTAGATGAGTTTCCACCGAAATGTCGGAGAAGTCAGGCCAGAGCACAAAAGCCAAGGATGGGAAGAAGTATGCAACACTCAGTTTGTTTAACACTTACAAAGGAAAGTCCTTGGAAACACAGAAGACTACAGTTGCAGCTCGACATGGGTTACAAAGTCTTGGAAAAGTTGGTATTTCACGGCGAATGCCCCCACCTGCTAACCTTCCAAGTCTCAAAGCAGAGAACAAAGGCAATGATCCTAATGTGAATATTGTGCCCAAAGATGGGACAGGATGGGCATCGAAACAAGAGCAACATGAAGAAGAAAAAGCACCAGAAGTGTCACCAGCACAGCCCAAACCTGGGGTTGCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAGATGGAATCCAAGTGAATAGTCAATTTCAGCAGGAATTTCCCAGTCTGCAGGCAGCTGGAGATCAGGAAAAAAAAGAAAAGGAAGCAAATGATGAAAACTATGGACCTGGACCCAGTTTACGCCCTCCAAATGTTGCTTGCTGGAGAGATGGTGGTAAGTCTGCTGGGTCACCTTCCTCTGATCAGGATGAAAAGCAACTTGGCCAGGATGAAAGCACGGCTATAACATCAGAACAAAATGATATTCTCAAAGTGGTAGAAAAGAGAATAGCTTGTGGTCCTCCACAGGCCAAACTGAATGGACAGCAACCTGCACTTGCTTCTCAGTATAGAGCTATGATGCCTCCATATATGTTTCAGCAGTACCCAAGGATGGCATATCCTCCTCTACATGGTCCCATGAGGTTCCCACCTTCATTATCAGAAGCAAACAAAAGCCTTCGAGGAAGAGGCCCTCCTCCTTCTTGGGCTTCTGAACCTGAACGCCCATCCATCCTTAGTGCATCCGAACTGAAGGAGCTCGATAAATTTGATAACCTAGATGCTGAAGCAGATGAAGGTTGGGCAGGTGCTCAGATGGAAGTAGATTACACAGAACAGCTGAACTTCAGTGATGATGATGAGCAAGGAAGTACTAGTCCTAAAGAGAGCAGCAGTGAGGATCAAACTGCAAAAACACCTGAAAGCACAGAAAACCGAAAAGAAGTAGATGAAGCTTCCAGCACTAAATCATCTTCTCAGATACCTGCTCAGCCTCCAGTCACAAAAAGTCCTTATGGGAAGGGACCACCATTTAATCAGGAACGTGGCCCATCTTCACACTTGCCACCACCTCCCAAGTTGCTTGCACAACAGCATCCCCCACCTCCAGATCGACAAATACCTGGAAGACAAGGCCCCTTTCCCTCCAAGCCTCCAGTACCTGATAACGATGAAATATGGAAGCAAAGACGAAAACAACAGTCTGAAATATCTGCAGCAGTAGAGCGTGCTCGTAAACGCCGTGAGGAGGAAGAGCGAAGGATGGAGGAACAGAGGAAGGCAGCGTGCGCAGAGAAATTGAAGCAGCTGGATGAGAAGCTCGGGATCATAGAAAAGCAGCCATCTCCAGAGGAACTTAGAGAAAGGGAGAGAGAGAAGGAGCGGGAGAGAGAACTTGAAAAAGAGAAAGAGCGGGAGCTTGAGAAAGAGCAGGAAAAGCAGAGGGAAATGGAGAGGGCAAGACAGCAAGAGAAAGAGTTAGAACAACAGAGAGAAAAGGAGCAGGAACTACAAAGGCTGAGAGAACAGGAAAAGGAGGGCGAGCCAAAGGAACAGGAAAAAGAGGAAAAAGTTGAACCCCAAGAGCCTGTTGTAGAGCCTGCGACAGAAAACCAAGAAAGTGAAAACAACTGCAAGAAAGAAGAAGAACCAATTTTCACTAGGCAGGACAGCAATCGCAGTGAAAAGGAGACCACACAAGTGGTACAAGAAGCAGAACCTGAATCGGGGGCTCAACCTCGACCTGGCTATTTCAAACAGTTTCAGAAATCATTGCCACCACGATTTCAGCGTCAGCAGGAGCAGATGAAACAGCAACAGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGTGTGCTTCCACAGACTGTGCCCTCACAGCCGTCTAATGGTTCAGTCCCTCCTCCACCACACAGACCCCTTTACCAGCCAATGCAACCCCACCCTCAACATCTGGCTTCTATGGGTTTTGACCCAAGGTGGCTCATGATGCAGTCCTATATGGATCCTCGAATGATATCAGGAAGGCCTGCTATGGACATTCCACCCATTCATCCTGGAATGATTCCTCCTAAGCCGTTAATCAGAAGAGACCAGATGGAAGGGTCACCTAATAGCTCTGAGTCATTTGAGCATATAGCTAGATCTGCAAGAGATCATGGAATTTCACTTTCTGAACCTCGAATGATGTGGGGGTCAGATCCCTATCATGCTGAGCCTCAGCAGGCAGCTACTCCCAAGTCTGCTGAAGAAACTGGGGATGCAAGGCCTGAAACTGCAATGGACCATGAGCATATGACTGCTGCTTATCCTGTAGAACATAGTCAGTTGGAAACTCATTCAAAAACGGACGTTGCTAGAGACTCAACTGAAACCGAAGAACAAAAGTTTTTAAGCAGATCACTGGAAGATGTAAAACCTCGCCATGTTGATACAAATACTCAGTCTGCTTGTTTTGATGTAATTGATCAGAAGAGCTTACCTACTTCTGCAGAAGAGCGGATCTCAGCGCTAGAAAGTCAACCTGCCCGAAAAAGAAGTGTTTCTCATGGATCTAACCATGCTCAGAATGCAGAGGAACAAAGAAATGAGCCGTCTGTTAGCATACCTAAGGTTATCAACAGATGTATGGATTCCAAAGAAACTGTAGAAAAGCCAGAGGAGAAGCCAAGAAAAGATGGCTTTCTGCGATCTTCTGAAGGGCCTAAACCAGAGAAAGTCTATAAATCTAAATCAGAAACTCGGTGGGGTCCAAGACCAAGCTCCAACAGAAGAGAAGAAGGTAATGATAGGCCTGTGAGAAGGTCGGGTCCCATTAAAAAACCTGTACTTAGAGATATGAAAGAGGAGCGAGAGCAGAGGAAGGAGAAAGAAGGTGAGAAGCTTGAGAAGGTCACTGAAAAAGTTGTTAAAGCAGAAAAGCCAGAAAAGAAAGATCTTCCTCTTCCTCTCCCCCCTCCAGCACCAGCTCAACCTCAGCCACAGCCATTGGTTTCACCACCAGTACAGCCAGAACCAGAGAAACCACCATCAACAGAAACATCAACTTTGACTCAGAAGCCATCTCAAGATGAGAAACCTTTGGAACCTGTTGGTAGTGTCCAGGTAGAACCTGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACCGACAGTCAAAGAAGAAAAGCCACCTGAGAAAGTCATTAACAAAGATGTTGGAATAGAAAGATCTCGCCCAGATTCTAGACTAGCAGTTAAGAAAGACTCATCTTTACCCACTAGGACCTATTGGAAAGAAGCTAGAGATAGGGATTGGTTTCCAGACCAAGGATACAGAGGCCGAGGCAGAGGCGAGTATTACTCCAGAGGTCGGAGCTATAGAGGCTCTTATGGGGGTCGTGGCAGAGGTGGTAGAGGGCACACTCGTGAGTATCCTCAGTATAGAGACAATAAGCCAAGAACAGAACATGTGCCTTCAGGACCTCTCAGACAACGAGAAGAAAGCGAAACACGAAGTGAGAGTTCTGATTTTGAGGTTGTTCCCAAAAGAAGGCGACAGAGGGGTTCTGAGACGGACACGGACAGTGAGGTTCATGAAAGTGCGAGTGACAAAGACAGTGTAAGCAAAGGGAAACTTCCCAAAAGAGAGGAACGGCCTGAGAACAAAAAACCTGTCAAGCCTCAGTCTTCTTTTAAACCTGAAAACCACGTCCGAATAGATAATCGGCCTTTAGAGAAACCTTACATAAGAGAGGAGGATAAATCTAAACCTGGTTTCCTTCCCAAAGGGGAGCCTACAAGGCGTGGCAGAGGAGGAACATTCAGACGAGGTGGAAGGGATCCTGGAGGCCGGCCATCACGTCCTGCCACCTTAAGAAGACCTGCTTATCGAGACAATCAGTGGAACACAAGGCAGGCAGAACCTCCTAAACCTGAAGATGGAGAGCCACCAAGAAGACATGAGCAGTTTATGCCTATACCGGCAGATAAACGACCTCCAAAATTTGAGCGAAAATTTGACCCGGCTAGAGAGAGGCCCCGAAGGCAGCGACCTACCCGACCACCAAGGCAAGATAAGCCACCTCGATTTAGACGGCTGAGAGAGAGAGAGGCCGCTTCCAAGACAAGTGAGGTGTTGGTACCCTCAAATGGCACAGCTAATAATGTTGTTCAAGAACCAGTTAATCCACCTGCGGACATTTCTGGAAATAAGACACCAGATTTGTCTAATCAGAATTCTTCAGATCAGGCAAATGAAGAGTGGGAAACAGCCTCTGAAAGCAGTGATTTTAATGAGAGGCGAGAGAGGGACGAGAAGAAAAATGCTGATAAGAGTTCACAAGCAGTTGTAAAGGCTGGTGAAAGTGTTTTGCCTCCAAAAAGGGAAATAGCGAAGAGAAGTTTTTCTAGTCAGAGACCTGGAGTTGATCGCCAGAATCGTCGTGGCAACAATGGCCCACCCAAATCAGGAAGGAATTTTTCAGGTCCTAGGAATGAAAGAAGAAATGGCCCACCATCAAAAGGTGGGAAGAGAGG
Divergent primers for circular RNA PCR
Primer Set-1
Forward primer
Tm
Reverse primer
Tm
Product size
CCCACCCAAATCAGGAAGGA
59.3
CCCATCCTTGGCTTTTGTGC
60.04
177
Primer Set-2
Forward primer
Tm
Reverse primer
Tm
Product size
CCCACCCAAATCAGGAAGGA
59.3
TTTGTGCTCTGGCCTGACTT
59.82
164
PCR template sequence:
ATCGTCGTGGCAACAATGGCCCACCCAAATCAGGAAGGAATTTTTCAGGTCCTAGGAATGAAAGAAGAAATGGCCCACCATCAAAAGGTGGGAAGAGAGGACTACTTTTAAGGGGTGTGTCAGGAGGTTTTGGACTAGATGAGTTTCCACCGAAATGTCGGAGAAGTCAGGCCAGAGCACAAAAGCCAAGGATGGGAAGA
Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs
32
Interacting miRNAs (#binding sites)
mmu-miR-370-3p(3), mmu-miR-211-5p(2), mmu-miR-204-5p(2), mmu-miR-22-3p(2), mmu-miR-207(2), mmu-miR-335-3p(2), mmu-miR-344-3p(2), mmu-miR-9-5p(1), mmu-miR-134-5p(1), mmu-miR-16-5p(1), mmu-miR-15a-5p(1), mmu-miR-135a-5p(1), mmu-miR-205-5p(1), mmu-miR-322-5p(1), mmu-miR-15b-5p(1), mmu-miR-298-5p(1), mmu-miR-217-5p(1), mmu-miR-138-5p(1), mmu-miR-495-3p(1), mmu-miR-136-5p(1), mmu-miR-494-3p(1), mmu-miR-362-5p(1), mmu-miR-383-5p(1), mmu-miR-98-5p(1), mmu-miR-384-3p(1), mmu-miR-29b-2-5p(1), mmu-miR-129-5p(1), mmu-miR-5101(1), mmu-miR-1904(1), mmu-miR-3105-3p(1), mmu-miR-193b-3p(1), mmu-miR-99a-5p(1)
siRNAs for circular RNA silencing
Junction sequence
GTGGGAAGAGAGGACTACTTTTAAGG
siRNA sets
NA
Protein-coding potential of circular RNAs
CPAT analysis
CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length
CIRCPRRC2C_4730_ORF_1
1.0204
0.123960777
1
4959
ORF sequence:
ATGTCGGAGAAGTCAGGCCAGAGCACAAAAGCCAAGGATGGGAAGAAGTATGCAACACTCAGTTTGTTTAACACTTACAAAGGAAAGTCCTTGGAAACACAGAAGACTACAGTTGCAGCTCGACATGGGTTACAAAGTCTTGGAAAAGTTGGTATTTCACGGCGAATGCCCCCACCTGCTAACCTTCCAAGTCTCAAAGCAGAGAACAAAGGCAATGATCCTAATGTGAATATTGTGCCCAAAGATGGGACAGGATGGGCATCGAAACAAGAGCAACATGAAGAAGAAAAAGCACCAGAAGTGTCACCAGCACAGCCCAAACCTGGGGTTGCAGCTCCCCCAGAAGTAGCACCTGCTCCCAAATCATGGGCCAGTAACAAGCAAGGTGGGCAAGGAGATGGAATCCAAGTGAATAGTCAATTTCAGCAGGAATTTCCCAGTCTGCAGGCAGCTGGAGATCAGGAAAAAAAAGAAAAGGAAGCAAATGATGAAAACTATGGACCTGGACCCAGTTTACGCCCTCCAAATGTTGCTTGCTGGAGAGATGGTGGTAAGTCTGCTGGGTCACCTTCCTCTGATCAGGATGAAAAGCAACTTGGCCAGGATGAAAGCACGGCTATAACATCAGAACAAAATGATATTCTCAAAGTGGTAGAAAAGAGAATAGCTTGTGGTCCTCCACAGGCCAAACTGAATGGACAGCAACCTGCACTTGCTTCTCAGTATAGAGCTATGATGCCTCCATATATGTTTCAGCAGTACCCAAGGATGGCATATCCTCCTCTACATGGTCCCATGAGGTTCCCACCTTCATTATCAGAAGCAAACAAAAGCCTTCGAGGAAGAGGCCCTCCTCCTTCTTGGGCTTCTGAACCTGAACGCCCATCCATCCTTAGTGCATCCGAACTGAAGGAGCTCGATAAATTTGATAACCTAGATGCTGAAGCAGATGAAGGTTGGGCAGGTGCTCAGATGGAAGTAGATTACACAGAACAGCTGAACTTCAGTGATGATGATGAGCAAGGAAGTACTAGTCCTAAAGAGAGCAGCAGTGAGGATCAAACTGCAAAAACACCTGAAAGCACAGAAAACCGAAAAGAAGTAGATGAAGCTTCCAGCACTAAATCATCTTCTCAGATACCTGCTCAGCCTCCAGTCACAAAAAGTCCTTATGGGAAGGGACCACCATTTAATCAGGAACGTGGCCCATCTTCACACTTGCCACCACCTCCCAAGTTGCTTGCACAACAGCATCCCCCACCTCCAGATCGACAAATACCTGGAAGACAAGGCCCCTTTCCCTCCAAGCCTCCAGTACCTGATAACGATGAAATATGGAAGCAAAGACGAAAACAACAGTCTGAAATATCTGCAGCAGTAGAGCGTGCTCGTAAACGCCGTGAGGAGGAAGAGCGAAGGATGGAGGAACAGAGGAAGGCAGCGTGCGCAGAGAAATTGAAGCAGCTGGATGAGAAGCTCGGGATCATAGAAAAGCAGCCATCTCCAGAGGAACTTAGAGAAAGGGAGAGAGAGAAGGAGCGGGAGAGAGAACTTGAAAAAGAGAAAGAGCGGGAGCTTGAGAAAGAGCAGGAAAAGCAGAGGGAAATGGAGAGGGCAAGACAGCAAGAGAAAGAGTTAGAACAACAGAGAGAAAAGGAGCAGGAACTACAAAGGCTGAGAGAACAGGAAAAGGAGGGCGAGCCAAAGGAACAGGAAAAAGAGGAAAAAGTTGAACCCCAAGAGCCTGTTGTAGAGCCTGCGACAGAAAACCAAGAAAGTGAAAACAACTGCAAGAAAGAAGAAGAACCAATTTTCACTAGGCAGGACAGCAATCGCAGTGAAAAGGAGACCACACAAGTGGTACAAGAAGCAGAACCTGAATCGGGGGCTCAACCTCGACCTGGCTATTTCAAACAGTTTCAGAAATCATTGCCACCACGATTTCAGCGTCAGCAGGAGCAGATGAAACAGCAACAGTGGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGTGTGCTTCCACAGACTGTGCCCTCACAGCCGTCTAATGGTTCAGTCCCTCCTCCACCACACAGACCCCTTTACCAGCCAATGCAACCCCACCCTCAACATCTGGCTTCTATGGGTTTTGACCCAAGGTGGCTCATGATGCAGTCCTATATGGATCCTCGAATGATATCAGGAAGGCCTGCTATGGACATTCCACCCATTCATCCTGGAATGATTCCTCCTAAGCCGTTAATCAGAAGAGACCAGATGGAAGGGTCACCTAATAGCTCTGAGTCATTTGAGCATATAGCTAGATCTGCAAGAGATCATGGAATTTCACTTTCTGAACCTCGAATGATGTGGGGGTCAGATCCCTATCATGCTGAGCCTCAGCAGGCAGCTACTCCCAAGTCTGCTGAAGAAACTGGGGATGCAAGGCCTGAAACTGCAATGGACCATGAGCATATGACTGCTGCTTATCCTGTAGAACATAGTCAGTTGGAAACTCATTCAAAAACGGACGTTGCTAGAGACTCAACTGAAACCGAAGAACAAAAGTTTTTAAGCAGATCACTGGAAGATGTAAAACCTCGCCATGTTGATACAAATACTCAGTCTGCTTGTTTTGATGTAATTGATCAGAAGAGCTTACCTACTTCTGCAGAAGAGCGGATCTCAGCGCTAGAAAGTCAACCTGCCCGAAAAAGAAGTGTTTCTCATGGATCTAACCATGCTCAGAATGCAGAGGAACAAAGAAATGAGCCGTCTGTTAGCATACCTAAGGTTATCAACAGATGTATGGATTCCAAAGAAACTGTAGAAAAGCCAGAGGAGAAGCCAAGAAAAGATGGCTTTCTGCGATCTTCTGAAGGGCCTAAACCAGAGAAAGTCTATAAATCTAAATCAGAAACTCGGTGGGGTCCAAGACCAAGCTCCAACAGAAGAGAAGAAGGTAATGATAGGCCTGTGAGAAGGTCGGGTCCCATTAAAAAACCTGTACTTAGAGATATGAAAGAGGAGCGAGAGCAGAGGAAGGAGAAAGAAGGTGAGAAGCTTGAGAAGGTCACTGAAAAAGTTGTTAAAGCAGAAAAGCCAGAAAAGAAAGATCTTCCTCTTCCTCTCCCCCCTCCAGCACCAGCTCAACCTCAGCCACAGCCATTGGTTTCACCACCAGTACAGCCAGAACCAGAGAAACCACCATCAACAGAAACATCAACTTTGACTCAGAAGCCATCTCAAGATGAGAAACCTTTGGAACCTGTTGGTAGTGTCCAGGTAGAACCTGTAGTTAAAACTGTAAACCAGCAAAGCGTTGCAGCACCGACAGTCAAAGAAGAAAAGCCACCTGAGAAAGTCATTAACAAAGATGTTGGAATAGAAAGATCTCGCCCAGATTCTAGACTAGCAGTTAAGAAAGACTCATCTTTACCCACTAGGACCTATTGGAAAGAAGCTAGAGATAGGGATTGGTTTCCAGACCAAGGATACAGAGGCCGAGGCAGAGGCGAGTATTACTCCAGAGGTCGGAGCTATAGAGGCTCTTATGGGGGTCGTGGCAGAGGTGGTAGAGGGCACACTCGTGAGTATCCTCAGTATAGAGACAATAAGCCAAGAACAGAACATGTGCCTTCAGGACCTCTCAGACAACGAGAAGAAAGCGAAACACGAAGTGAGAGTTCTGATTTTGAGGTTGTTCCCAAAAGAAGGCGACAGAGGGGTTCTGAGACGGACACGGACAGTGAGGTTCATGAAAGTGCGAGTGACAAAGACAGTGTAAGCAAAGGGAAACTTCCCAAAAGAGAGGAACGGCCTGAGAACAAAAAACCTGTCAAGCCTCAGTCTTCTTTTAAACCTGAAAACCACGTCCGAATAGATAATCGGCCTTTAGAGAAACCTTACATAAGAGAGGAGGATAAATCTAAACCTGGTTTCCTTCCCAAAGGGGAGCCTACAAGGCGTGGCAGAGGAGGAACATTCAGACGAGGTGGAAGGGATCCTGGAGGCCGGCCATCACGTCCTGCCACCTTAAGAAGACCTGCTTATCGAGACAATCAGTGGAACACAAGGCAGGCAGAACCTCCTAAACCTGAAGATGGAGAGCCACCAAGAAGACATGAGCAGTTTATGCCTATACCGGCAGATAAACGACCTCCAAAATTTGAGCGAAAATTTGACCCGGCTAGAGAGAGGCCCCGAAGGCAGCGACCTACCCGACCACCAAGGCAAGATAAGCCACCTCGATTTAGACGGCTGAGAGAGAGAGAGGCCGCTTCCAAGACAAGTGAGGTGTTGGTACCCTCAAATGGCACAGCTAATAATGTTGTTCAAGAACCAGTTAATCCACCTGCGGACATTTCTGGAAATAAGACACCAGATTTGTCTAATCAGAATTCTTCAGATCAGGCAAATGAAGAGTGGGAAACAGCCTCTGAAAGCAGTGATTTTAATGAGAGGCGAGAGAGGGACGAGAAGAAAAATGCTGATAAGAGTTCACAAGCAGTTGTAAAGGCTGGTGAAAGTGTTTTGCCTCCAAAAAGGGAAATAGCGAAGAGAAGTTTTTCTAGTCAGAGACCTGGAGTTGATCGCCAGAATCGTCGTGGCAACAATGGCCCACCCAAATCAGGAAGGAATTTTTCAGGTCCTAGGAATGAAAGAAGAAATGGCCCACCATCAAAAGGTGGGAAGAGAGGACTACTTTTAAGGGGTGTGTCAGGAGGTTTTGGACTAGATGAGTTTCCACCGAAATGTCGGAGAAGTCAGGCCAGAGCACAAAAGCCAAGGATGGGAAGAAGTATGCAACACTCAGTTTGTTTAACACTTACAAAGGAAAGTCCTTGGAAACACAGAAGACTACAGTTGCAGCTCGACATGGGTTACAAAGTCTTGGAAAAGTTGGTATTTCACGGCGAATGCCCCCACCTGCTAACCTTCCAAGTCTCAAAGCAGAGAACAAAGGCAATGATCCTAATGTGA
Peptide sequence:
MSEKSGQSTKAKDGKKYATLSLFNTYKGKSLETQKTTVAARHGLQSLGKVGISRRMPPPANLPSLKAENKGNDPNVNIVPKDGTGWASKQEQHEEEKAPEVSPAQPKPGVAAPPEVAPAPKSWASNKQGGQGDGIQVNSQFQQEFPSLQAAGDQEKKEKEANDENYGPGPSLRPPNVACWRDGGKSAGSPSSDQDEKQLGQDESTAITSEQNDILKVVEKRIACGPPQAKLNGQQPALASQYRAMMPPYMFQQYPRMAYPPLHGPMRFPPSLSEANKSLRGRGPPPSWASEPERPSILSASELKELDKFDNLDAEADEGWAGAQMEVDYTEQLNFSDDDEQGSTSPKESSSEDQTAKTPESTENRKEVDEASSTKSSSQIPAQPPVTKSPYGKGPPFNQERGPSSHLPPPPKLLAQQHPPPPDRQIPGRQGPFPSKPPVPDNDEIWKQRRKQQSEISAAVERARKRREEEERRMEEQRKAACAEKLKQLDEKLGIIEKQPSPEELREREREKERERELEKEKERELEKEQEKQREMERARQQEKELEQQREKEQELQRLREQEKEGEPKEQEKEEKVEPQEPVVEPATENQESENNCKKEEEPIFTRQDSNRSEKETTQVVQEAEPESGAQPRPGYFKQFQKSLPPRFQRQQEQMKQQQWQQQQQQQQQGVLPQTVPSQPSNGSVPPPPHRPLYQPMQPHPQHLASMGFDPRWLMMQSYMDPRMISGRPAMDIPPIHPGMIPPKPLIRRDQMEGSPNSSESFEHIARSARDHGISLSEPRMMWGSDPYHAEPQQAATPKSAEETGDARPETAMDHEHMTAAYPVEHSQLETHSKTDVARDSTETEEQKFLSRSLEDVKPRHVDTNTQSACFDVIDQKSLPTSAEERISALESQPARKRSVSHGSNHAQNAEEQRNEPSVSIPKVINRCMDSKETVEKPEEKPRKDGFLRSSEGPKPEKVYKSKSETRWGPRPSSNRREEGNDRPVRRSGPIKKPVLRDMKEEREQRKEKEGEKLEKVTEKVVKAEKPEKKDLPLPLPPPAPAQPQPQPLVSPPVQPEPEKPPSTETSTLTQKPSQDEKPLEPVGSVQVEPVVKTVNQQSVAAPTVKEEKPPEKVINKDVGIERSRPDSRLAVKKDSSLPTRTYWKEARDRDWFPDQGYRGRGRGEYYSRGRSYRGSYGGRGRGGRGHTREYPQYRDNKPRTEHVPSGPLRQREESETRSESSDFEVVPKRRRQRGSETDTDSEVHESASDKDSVSKGKLPKREERPENKKPVKPQSSFKPENHVRIDNRPLEKPYIREEDKSKPGFLPKGEPTRRGRGGTFRRGGRDPGGRPSRPATLRRPAYRDNQWNTRQAEPPKPEDGEPPRRHEQFMPIPADKRPPKFERKFDPARERPRRQRPTRPPRQDKPPRFRRLREREAASKTSEVLVPSNGTANNVVQEPVNPPADISGNKTPDLSNQNSSDQANEEWETASESSDFNERRERDEKKNADKSSQAVVKAGESVLPPKREIAKRSFSSQRPGVDRQNRRGNNGPPKSGRNFSGPRNERRNGPPSKGGKRGLLLRGVSGGFGLDEFPPKCRRSQARAQKPRMGRSMQHSVCLTLTKESPWKHRRLQLQLDMGYKVLEKLVFHGECPHLLTFQVSKQRTKAMILM
IRESfinder result
IRESfinder score
0.477070717
IRES/non IRES
non-IRES
riboCIRC information
riboCIRC ID
NA
NA
Evidence
Peptide sequence:
NA
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