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mmu_circLmtk2_3141
Basic information of circular RNA
PanCircBase ID:
mmu_circLmtk2_3141
mm39_Chr. Position ID:
chr5|144103115|144113295|+
Gene name:
Lmtk2
Transcript:
ENSMUST00000041804.8
CircRNA type:
Exonic circular (circ)RNA
Exon/Intron count:
3
Exon/intron indexes:
9,10,11
Exon/intron offsets:
0,5439,7311
Genomic length:
10180
Exon/intron sizes in nt:
1,22,15,02,869
Flanking exon/introns:
chr5:144101508-144103115|chr5:144113295-144119554
Splice length:
3141
Other database IDs:
circAtlas: mmu-Lmtk2_0006
circAtlas: hsa-LMTK2_0016, CIRCpedia: HSA_CIRCpedia_59396
Human Ortholog IDs:
Mature spliced Sequence:
GAGGATTACATTGAGACAGATGACAAGAAAGTTTTCCCCCTGAGATGGACTGCTCCAGAATTAGTGACCAGCTTTCAAGACAGACTCTTGACTGCAGATCAGACTAAATACAGTAATATCTGGTCCTTAGGTGTAACACTTTGGGAACTCTTCAACAATGCTGCTCAGCCGTATGCAAACCTTTCTGACCTGGATGTCCTCAATCAAGTCATTCGGGAGAGGGACATGAAGCTCCCAAAGCCGCAGCTGGAGCAGCCGTACTCGGATAGATGGTACGAAGTGCTGCAGTTCTGCTGGCTGCCTCCTGACAAGAGGCCAGCCGCAGAAGACGTGCACCGTCTGCTAACTTACCTGAGGATGCAGAGCCAGCGGGACTCGGAGGTCGACTTTGAACAGCAGTGGACTGCTCTCAAGCCCGACACCAACAGCAGGGACGCATCCAGCAGCGCTGCCTTCCCCATCCTTGACCACTTCGCCCGGGACCGGCTGGGTCGGGAGATGGAGGAGGTCCTCACGGTGACGGAGACCAGCCAGGGCCTGAGCTTTGAGTATGTGTGGGAGGCTGCCAAGCACGACCATTTTGATGAGCAGGGCCGGGGCCACCCAGATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCAGTGGAGGTGTTTGAGAATTCGCTTTCAGATCCTGGCCCTGGCAAGCAAGATGACAGTGGCCAGGAGGTGCCCGTGAGGGCCCCTGGGGTGGTTCCTGTGTTTGATGCACACAACCTCTCTGTTGGAAGTGACTACTACATCCAGCTGGAGGAGAAAAGCAGCAGCAATCTGGGACTGGACCCCCCTGCACTGCTCACAACTGAAGTAGATAAGCTAGAGAGGGCTGGGGCTGAGGAACCCAGGACAGAAGAGGATTTCTTCCAGAGCAGTGCTCACCCCAAAGAAGCCAGCTCTACCGAGGACTCACGTGCTACCAGCATCCCTGGGAGCCCTTTCAACCTATTTAGTGACCTTGACAAAGCAGATGACCTGCCCAGTCACCAAAAAATATTTGATCTAATGGAACTAAATGGAGTTCAAGCTGACTTTAAGCCAGCCATCTTGAGTTCAAGCCTGGATGACCCCAAGGACACCTGCCAGTCTGACAAAGAAAAGCCCCATAAGCTCTTGGACCAGGGCCCTCTGTGCTTATCAGAAAGCCTTTTGCACCAAGATCACTTTGATCCACTGAGTGTCCAAGAATTGTCAGAAAACTTTTTATTTCTTCAGGAGAAAAATCTACTGAAAGGCTCTCTGACTACCAAGGAGCAAGTGAGCGACCTTCAAACAGAACTCAAGAATGCAGGTTTTACCTCAGCACTGTTGGAGTCACCCCAGAGAGGCTCTGAAAGTTCTGAACTTGAGTTCCTGGAAAATACACTAGACTTTCCTTTGTCACAGGGAGACACGCGTGGACAGAATGAAGGTGCAGGTGTCAGGCGTCACAGTGGTACCTCACCACAGGCCTCCCCAGCCTTGCTCACAGAAGAAGGATCTCCTACTGCCCCCACAGACCCAATTCTGAAGCCAGAAGAAACCAAATCCTTTAGAGATGTCAGAGTCCCCGAGGACTCCATCTGCTTGGAGCTAGGCCCCGACCCCGTGACTGTTGGAGTTGAAATTCCTGCTACTGATGCCAAAACCCTCGATGGGGGCAACAGACCCCCAGACGTCACTTGCCAAAGCAAGGAGGCCTTGAGTCTAACCAACAGACACCCCATCCTTGTGAATGATATTACTGCTCAGGGTAGCGTGGAGAGTTGTCTTCCAGAATCGAGACAGGATTTACAAAATGAGCCATTTTCAGAAGACCCTCTTAGTGTCAGCTCACTGGAGAAACACTCGGAAGCTGCGGAGACTTTAAACCAGCTTAACTCTAAGGCTGCCCCGGAGGATGCAGCCTTGGCGTCTGCCCTCTCCTCGGATTCTACCAGCCAAGATAGCCTCTTAGAAGACAGTTTGTCAACACCCATCCCCACCTCAGAGCAGTCTGTGGAGACGCCAGACTCCCTGGATTCAGTGGATGTCCGTGAAGCATTGCTAGAGTCCCTAGGCTCCCACACCCCTCGGAAACTCTTGCCTCCCGATAAGCCTGCCGACAGCGGCTATGAGACGGAGAACCTGGAATCTCCTGAGTGGACCCTGCACCCTGCACCCGAAGGCACTGCTGACTCAGACGCAGCTGCAGCAGGTGACAGTGGCCACAGCAGTTTGCCTCCCAACCCGGTCATTGTCATCTCGGATGCAGGCGATGGCCACAGAGGTGCTGAAGGTCCTCCTCAGAGCTTCACACTTGGCCCCCAGAGTTCATATCGAGACTCTGCATACTTCTCAGACAATGACTCGGAGCCAGATAAAAAGCCCGAGGAGGTCCCAGGAACATCTGCCAATGCCCTGGTGTTGGTAAAGGGCCAGTCCCCACCTGAGTCAGTTGTCCCAGAAGAAAGCTCTGATGTCAGAGAAGGCTGCCTGGAAGCCCCACAGGACAAGCCAGATCAAAGTCGGGTGTCTACTTTGCAGAATTCTTGTCACTCAGAACTACAAGAAACATTGCAGCCCACACCAGCTGATGCTTCCAGAGAGTCCTGTCCTGTGAACGACGAGGCCAGCAGCCCCTTGAGTTTGTTGAATTCAGAACCTAGCAGCTGCGATGACCTGGACACACAGGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATAAATCTTTGCCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTGTGTGTCTGGGATGCTGGACCTCTCGGAGGATGGGATGGATGCCGATGAGGAGGATGAGAACAGCGACGACTCGGACGAGGACCTTCGAGCCTTCAACTTGCACAGCCTAAGCTCTGAGTCTGAAGACGACACGGAGCACCCTGTGCCCATCATTGTCAGTAACGATGATGGTAGGCACCTGCGGAGTTTGCTGAAACCCTCAGCTGCCGAGGCCATTGAGCAGCTGCCGGAAGACTGGAAGAAGGAAAAGAAGGCAGTGACATTTTTCGATGATGTCACCGTTTATCTGTTTGACCAG
Divergent primers for circular RNA PCR
Primer Set-1
Forward primer
Tm
Reverse primer
Tm
Product size
TGCCGGAAGACTGGAAGAAG
59.68
AGCTGGTCACTAATTCTGGAGC
60.09
147
Primer Set-2
Forward primer
Tm
Reverse primer
Tm
Product size
GCCGGAAGACTGGAAGAAGG
60.39
AGCTGGTCACTAATTCTGGAGC
60.09
146
PCR template sequence:
CTCAGCTGCCGAGGCCATTGAGCAGCTGCCGGAAGACTGGAAGAAGGAAAAGAAGGCAGTGACATTTTTCGATGATGTCACCGTTTATCTGTTTGACCAGGAGGATTACATTGAGACAGATGACAAGAAAGTTTTCCCCCTGAGATGGACTGCTCCAGAATTAGTGACCAGCTTTCAAGACAGACTCTTGACTGCAGATC
Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs
17
Interacting miRNAs (#binding sites)
mmu-miR-199a-5p(1), mmu-miR-103-3p(1), mmu-miR-205-5p(1), mmu-miR-709(1), mmu-miR-138-5p(1), mmu-miR-149-5p(1), mmu-miR-136-5p(1), mmu-miR-127-5p(1), mmu-miR-212-3p(1), mmu-miR-370-3p(1), mmu-miR-107-3p(1), mmu-miR-29b-2-5p(1), mmu-miR-669d-5p(1), mmu-miR-3065-5p(1), mmu-miR-1199-5p(1), mmu-miR-193b-3p(1), mmu-miR-542-5p(1)
siRNAs for circular RNA silencing
Junction sequence
TCTGTTTGACCAGGAGGATTACATTG
siRNA sets
AATGTAATCCTCCTGGTCA, CAATGTAATCCTCCTGGTC, TAATCCTCCTGGTCAAACA
Protein-coding potential of circular RNAs
CPAT analysis
CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length
CIRCLMTK2_3141_ORF_1
1.0396
0.336617306
1
6057
ORF sequence:
ATGAAGCTCCCAAAGCCGCAGCTGGAGCAGCCGTACTCGGATAGATGGTACGAAGTGCTGCAGTTCTGCTGGCTGCCTCCTGACAAGAGGCCAGCCGCAGAAGACGTGCACCGTCTGCTAACTTACCTGAGGATGCAGAGCCAGCGGGACTCGGAGGTCGACTTTGAACAGCAGTGGACTGCTCTCAAGCCCGACACCAACAGCAGGGACGCATCCAGCAGCGCTGCCTTCCCCATCCTTGACCACTTCGCCCGGGACCGGCTGGGTCGGGAGATGGAGGAGGTCCTCACGGTGACGGAGACCAGCCAGGGCCTGAGCTTTGAGTATGTGTGGGAGGCTGCCAAGCACGACCATTTTGATGAGCAGGGCCGGGGCCACCCAGATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCAGTGGAGGTGTTTGAGAATTCGCTTTCAGATCCTGGCCCTGGCAAGCAAGATGACAGTGGCCAGGAGGTGCCCGTGAGGGCCCCTGGGGTGGTTCCTGTGTTTGATGCACACAACCTCTCTGTTGGAAGTGACTACTACATCCAGCTGGAGGAGAAAAGCAGCAGCAATCTGGGACTGGACCCCCCTGCACTGCTCACAACTGAAGTAGATAAGCTAGAGAGGGCTGGGGCTGAGGAACCCAGGACAGAAGAGGATTTCTTCCAGAGCAGTGCTCACCCCAAAGAAGCCAGCTCTACCGAGGACTCACGTGCTACCAGCATCCCTGGGAGCCCTTTCAACCTATTTAGTGACCTTGACAAAGCAGATGACCTGCCCAGTCACCAAAAAATATTTGATCTAATGGAACTAAATGGAGTTCAAGCTGACTTTAAGCCAGCCATCTTGAGTTCAAGCCTGGATGACCCCAAGGACACCTGCCAGTCTGACAAAGAAAAGCCCCATAAGCTCTTGGACCAGGGCCCTCTGTGCTTATCAGAAAGCCTTTTGCACCAAGATCACTTTGATCCACTGAGTGTCCAAGAATTGTCAGAAAACTTTTTATTTCTTCAGGAGAAAAATCTACTGAAAGGCTCTCTGACTACCAAGGAGCAAGTGAGCGACCTTCAAACAGAACTCAAGAATGCAGGTTTTACCTCAGCACTGTTGGAGTCACCCCAGAGAGGCTCTGAAAGTTCTGAACTTGAGTTCCTGGAAAATACACTAGACTTTCCTTTGTCACAGGGAGACACGCGTGGACAGAATGAAGGTGCAGGTGTCAGGCGTCACAGTGGTACCTCACCACAGGCCTCCCCAGCCTTGCTCACAGAAGAAGGATCTCCTACTGCCCCCACAGACCCAATTCTGAAGCCAGAAGAAACCAAATCCTTTAGAGATGTCAGAGTCCCCGAGGACTCCATCTGCTTGGAGCTAGGCCCCGACCCCGTGACTGTTGGAGTTGAAATTCCTGCTACTGATGCCAAAACCCTCGATGGGGGCAACAGACCCCCAGACGTCACTTGCCAAAGCAAGGAGGCCTTGAGTCTAACCAACAGACACCCCATCCTTGTGAATGATATTACTGCTCAGGGTAGCGTGGAGAGTTGTCTTCCAGAATCGAGACAGGATTTACAAAATGAGCCATTTTCAGAAGACCCTCTTAGTGTCAGCTCACTGGAGAAACACTCGGAAGCTGCGGAGACTTTAAACCAGCTTAACTCTAAGGCTGCCCCGGAGGATGCAGCCTTGGCGTCTGCCCTCTCCTCGGATTCTACCAGCCAAGATAGCCTCTTAGAAGACAGTTTGTCAACACCCATCCCCACCTCAGAGCAGTCTGTGGAGACGCCAGACTCCCTGGATTCAGTGGATGTCCGTGAAGCATTGCTAGAGTCCCTAGGCTCCCACACCCCTCGGAAACTCTTGCCTCCCGATAAGCCTGCCGACAGCGGCTATGAGACGGAGAACCTGGAATCTCCTGAGTGGACCCTGCACCCTGCACCCGAAGGCACTGCTGACTCAGACGCAGCTGCAGCAGGTGACAGTGGCCACAGCAGTTTGCCTCCCAACCCGGTCATTGTCATCTCGGATGCAGGCGATGGCCACAGAGGTGCTGAAGGTCCTCCTCAGAGCTTCACACTTGGCCCCCAGAGTTCATATCGAGACTCTGCATACTTCTCAGACAATGACTCGGAGCCAGATAAAAAGCCCGAGGAGGTCCCAGGAACATCTGCCAATGCCCTGGTGTTGGTAAAGGGCCAGTCCCCACCTGAGTCAGTTGTCCCAGAAGAAAGCTCTGATGTCAGAGAAGGCTGCCTGGAAGCCCCACAGGACAAGCCAGATCAAAGTCGGGTGTCTACTTTGCAGAATTCTTGTCACTCAGAACTACAAGAAACATTGCAGCCCACACCAGCTGATGCTTCCAGAGAGTCCTGTCCTGTGAACGACGAGGCCAGCAGCCCCTTGAGTTTGTTGAATTCAGAACCTAGCAGCTGCGATGACCTGGACACACAGGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATAAATCTTTGCCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTGTGTGTCTGGGATGCTGGACCTCTCGGAGGATGGGATGGATGCCGATGAGGAGGATGAGAACAGCGACGACTCGGACGAGGACCTTCGAGCCTTCAACTTGCACAGCCTAAGCTCTGAGTCTGAAGACGACACGGAGCACCCTGTGCCCATCATTGTCAGTAACGATGATGGTAGGCACCTGCGGAGTTTGCTGAAACCCTCAGCTGCCGAGGCCATTGAGCAGCTGCCGGAAGACTGGAAGAAGGAAAAGAAGGCAGTGACATTTTTCGATGATGTCACCGTTTATCTGTTTGACCAGGAGGATTACATTGAGACAGATGACAAGAAAGTTTTCCCCCTGAGATGGACTGCTCCAGAATTAGTGACCAGCTTTCAAGACAGACTCTTGACTGCAGATCAGACTAAATACAGTAATATCTGGTCCTTAGGTGTAACACTTTGGGAACTCTTCAACAATGCTGCTCAGCCGTATGCAAACCTTTCTGACCTGGATGTCCTCAATCAAGTCATTCGGGAGAGGGACATGAAGCTCCCAAAGCCGCAGCTGGAGCAGCCGTACTCGGATAGATGGTACGAAGTGCTGCAGTTCTGCTGGCTGCCTCCTGACAAGAGGCCAGCCGCAGAAGACGTGCACCGTCTGCTAACTTACCTGAGGATGCAGAGCCAGCGGGACTCGGAGGTCGACTTTGAACAGCAGTGGACTGCTCTCAAGCCCGACACCAACAGCAGGGACGCATCCAGCAGCGCTGCCTTCCCCATCCTTGACCACTTCGCCCGGGACCGGCTGGGTCGGGAGATGGAGGAGGTCCTCACGGTGACGGAGACCAGCCAGGGCCTGAGCTTTGAGTATGTGTGGGAGGCTGCCAAGCACGACCATTTTGATGAGCAGGGCCGGGGCCACCCAGATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCAGTGGAGGTGTTTGAGAATTCGCTTTCAGATCCTGGCCCTGGCAAGCAAGATGACAGTGGCCAGGAGGTGCCCGTGAGGGCCCCTGGGGTGGTTCCTGTGTTTGATGCACACAACCTCTCTGTTGGAAGTGACTACTACATCCAGCTGGAGGAGAAAAGCAGCAGCAATCTGGGACTGGACCCCCCTGCACTGCTCACAACTGAAGTAGATAAGCTAGAGAGGGCTGGGGCTGAGGAACCCAGGACAGAAGAGGATTTCTTCCAGAGCAGTGCTCACCCCAAAGAAGCCAGCTCTACCGAGGACTCACGTGCTACCAGCATCCCTGGGAGCCCTTTCAACCTATTTAGTGACCTTGACAAAGCAGATGACCTGCCCAGTCACCAAAAAATATTTGATCTAATGGAACTAAATGGAGTTCAAGCTGACTTTAAGCCAGCCATCTTGAGTTCAAGCCTGGATGACCCCAAGGACACCTGCCAGTCTGACAAAGAAAAGCCCCATAAGCTCTTGGACCAGGGCCCTCTGTGCTTATCAGAAAGCCTTTTGCACCAAGATCACTTTGATCCACTGAGTGTCCAAGAATTGTCAGAAAACTTTTTATTTCTTCAGGAGAAAAATCTACTGAAAGGCTCTCTGACTACCAAGGAGCAAGTGAGCGACCTTCAAACAGAACTCAAGAATGCAGGTTTTACCTCAGCACTGTTGGAGTCACCCCAGAGAGGCTCTGAAAGTTCTGAACTTGAGTTCCTGGAAAATACACTAGACTTTCCTTTGTCACAGGGAGACACGCGTGGACAGAATGAAGGTGCAGGTGTCAGGCGTCACAGTGGTACCTCACCACAGGCCTCCCCAGCCTTGCTCACAGAAGAAGGATCTCCTACTGCCCCCACAGACCCAATTCTGAAGCCAGAAGAAACCAAATCCTTTAGAGATGTCAGAGTCCCCGAGGACTCCATCTGCTTGGAGCTAGGCCCCGACCCCGTGACTGTTGGAGTTGAAATTCCTGCTACTGATGCCAAAACCCTCGATGGGGGCAACAGACCCCCAGACGTCACTTGCCAAAGCAAGGAGGCCTTGAGTCTAACCAACAGACACCCCATCCTTGTGAATGATATTACTGCTCAGGGTAGCGTGGAGAGTTGTCTTCCAGAATCGAGACAGGATTTACAAAATGAGCCATTTTCAGAAGACCCTCTTAGTGTCAGCTCACTGGAGAAACACTCGGAAGCTGCGGAGACTTTAAACCAGCTTAACTCTAAGGCTGCCCCGGAGGATGCAGCCTTGGCGTCTGCCCTCTCCTCGGATTCTACCAGCCAAGATAGCCTCTTAGAAGACAGTTTGTCAACACCCATCCCCACCTCAGAGCAGTCTGTGGAGACGCCAGACTCCCTGGATTCAGTGGATGTCCGTGAAGCATTGCTAGAGTCCCTAGGCTCCCACACCCCTCGGAAACTCTTGCCTCCCGATAAGCCTGCCGACAGCGGCTATGAGACGGAGAACCTGGAATCTCCTGAGTGGACCCTGCACCCTGCACCCGAAGGCACTGCTGACTCAGACGCAGCTGCAGCAGGTGACAGTGGCCACAGCAGTTTGCCTCCCAACCCGGTCATTGTCATCTCGGATGCAGGCGATGGCCACAGAGGTGCTGAAGGTCCTCCTCAGAGCTTCACACTTGGCCCCCAGAGTTCATATCGAGACTCTGCATACTTCTCAGACAATGACTCGGAGCCAGATAAAAAGCCCGAGGAGGTCCCAGGAACATCTGCCAATGCCCTGGTGTTGGTAAAGGGCCAGTCCCCACCTGAGTCAGTTGTCCCAGAAGAAAGCTCTGATGTCAGAGAAGGCTGCCTGGAAGCCCCACAGGACAAGCCAGATCAAAGTCGGGTGTCTACTTTGCAGAATTCTTGTCACTCAGAACTACAAGAAACATTGCAGCCCACACCAGCTGATGCTTCCAGAGAGTCCTGTCCTGTGAACGACGAGGCCAGCAGCCCCTTGAGTTTGTTGAATTCAGAACCTAGCAGCTGCGATGACCTGGACACACAGGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATAAATCTTTGCCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTGTGTGTCTGGGATGCTGGACCTCTCGGAGGATGGGATGGATGCCGATGAGGAGGATGAGAACAGCGACGACTCGGACGAGGACCTTCGAGCCTTCAACTTGCACAGCCTAAGCTCTGAGTCTGAAGACGACACGGAGCACCCTGTGCCCATCATTGTCAGTAACGATGATGGTAGGCACCTGCGGAGTTTGCTGAAACCCTCAGCTGCCGAGGCCATTGAGCAGCTGCCGGAAGACTGGAAGAAGGAAAAGAAGGCAGTGACATTTTTCGATGATGTCACCGTTTATCTGTTTGACCAG
Peptide sequence:
MKLPKPQLEQPYSDRWYEVLQFCWLPPDKRPAAEDVHRLLTYLRMQSQRDSEVDFEQQWTALKPDTNSRDASSSAAFPILDHFARDRLGREMEEVLTVTETSQGLSFEYVWEAAKHDHFDEQGRGHPDEALSYSSMFFPVEVFENSLSDPGPGKQDDSGQEVPVRAPGVVPVFDAHNLSVGSDYYIQLEEKSSSNLGLDPPALLTTEVDKLERAGAEEPRTEEDFFQSSAHPKEASSTEDSRATSIPGSPFNLFSDLDKADDLPSHQKIFDLMELNGVQADFKPAILSSSLDDPKDTCQSDKEKPHKLLDQGPLCLSESLLHQDHFDPLSVQELSENFLFLQEKNLLKGSLTTKEQVSDLQTELKNAGFTSALLESPQRGSESSELEFLENTLDFPLSQGDTRGQNEGAGVRRHSGTSPQASPALLTEEGSPTAPTDPILKPEETKSFRDVRVPEDSICLELGPDPVTVGVEIPATDAKTLDGGNRPPDVTCQSKEALSLTNRHPILVNDITAQGSVESCLPESRQDLQNEPFSEDPLSVSSLEKHSEAAETLNQLNSKAAPEDAALASALSSDSTSQDSLLEDSLSTPIPTSEQSVETPDSLDSVDVREALLESLGSHTPRKLLPPDKPADSGYETENLESPEWTLHPAPEGTADSDAAAAGDSGHSSLPPNPVIVISDAGDGHRGAEGPPQSFTLGPQSSYRDSAYFSDNDSEPDKKPEEVPGTSANALVLVKGQSPPESVVPEESSDVREGCLEAPQDKPDQSRVSTLQNSCHSELQETLQPTPADASRESCPVNDEASSPLSLLNSEPSSCDDLDTQEDRPCTLASTGTNTNELLAYMSSTLDKSLPSHLESSKLKEPDIEGKYLGKLCVSGMLDLSEDGMDADEEDENSDDSDEDLRAFNLHSLSSESEDDTEHPVPIIVSNDDGRHLRSLLKPSAAEAIEQLPEDWKKEKKAVTFFDDVTVYLFDQEDYIETDDKKVFPLRWTAPELVTSFQDRLLTADQTKYSNIWSLGVTLWELFNNAAQPYANLSDLDVLNQVIRERDMKLPKPQLEQPYSDRWYEVLQFCWLPPDKRPAAEDVHRLLTYLRMQSQRDSEVDFEQQWTALKPDTNSRDASSSAAFPILDHFARDRLGREMEEVLTVTETSQGLSFEYVWEAAKHDHFDEQGRGHPDEALSYSSMFFPVEVFENSLSDPGPGKQDDSGQEVPVRAPGVVPVFDAHNLSVGSDYYIQLEEKSSSNLGLDPPALLTTEVDKLERAGAEEPRTEEDFFQSSAHPKEASSTEDSRATSIPGSPFNLFSDLDKADDLPSHQKIFDLMELNGVQADFKPAILSSSLDDPKDTCQSDKEKPHKLLDQGPLCLSESLLHQDHFDPLSVQELSENFLFLQEKNLLKGSLTTKEQVSDLQTELKNAGFTSALLESPQRGSESSELEFLENTLDFPLSQGDTRGQNEGAGVRRHSGTSPQASPALLTEEGSPTAPTDPILKPEETKSFRDVRVPEDSICLELGPDPVTVGVEIPATDAKTLDGGNRPPDVTCQSKEALSLTNRHPILVNDITAQGSVESCLPESRQDLQNEPFSEDPLSVSSLEKHSEAAETLNQLNSKAAPEDAALASALSSDSTSQDSLLEDSLSTPIPTSEQSVETPDSLDSVDVREALLESLGSHTPRKLLPPDKPADSGYETENLESPEWTLHPAPEGTADSDAAAAGDSGHSSLPPNPVIVISDAGDGHRGAEGPPQSFTLGPQSSYRDSAYFSDNDSEPDKKPEEVPGTSANALVLVKGQSPPESVVPEESSDVREGCLEAPQDKPDQSRVSTLQNSCHSELQETLQPTPADASRESCPVNDEASSPLSLLNSEPSSCDDLDTQEDRPCTLASTGTNTNELLAYMSSTLDKSLPSHLESSKLKEPDIEGKYLGKLCVSGMLDLSEDGMDADEEDENSDDSDEDLRAFNLHSLSSESEDDTEHPVPIIVSNDDGRHLRSLLKPSAAEAIEQLPEDWKKEKKAVTFFDDVTVYLFDQ
IRESfinder result
IRESfinder score
0.501745503
IRES/non IRES
IRES
riboCIRC information
riboCIRC ID
NA
NA
Evidence
Peptide sequence:
NA
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