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mmu_circLmtk2_3141

Basic information of circular RNA
PanCircBase ID:

mmu_circLmtk2_3141

mm39_Chr. Position ID:

chr5|144103115|144113295|+

Gene name:

Lmtk2

Transcript:

ENSMUST00000041804.8

CircRNA type:

Exonic circular (circ)RNA

Exon/Intron count:

3

Exon/intron indexes:

9,10,11

Exon/intron offsets:

0,5439,7311

Genomic length:

10180

Exon/intron sizes in nt:

1,22,15,02,869

Flanking exon/introns:

chr5:144101508-144103115|chr5:144113295-144119554

Splice length:

3141

Other database IDs:

circAtlas: mmu-Lmtk2_0006

circAtlas: hsa-LMTK2_0016, CIRCpedia: HSA_CIRCpedia_59396

Human Ortholog IDs:
Mature spliced Sequence:

GAGGATTACATTGAGACAGATGACAAGAAAGTTTTCCCCCTGAGATGGACTGCTCCAGAATTAGTGACCAGCTTTCAAGACAGACTCTTGACTGCAGATCAGACTAAATACAGTAATATCTGGTCCTTAGGTGTAACACTTTGGGAACTCTTCAACAATGCTGCTCAGCCGTATGCAAACCTTTCTGACCTGGATGTCCTCAATCAAGTCATTCGGGAGAGGGACATGAAGCTCCCAAAGCCGCAGCTGGAGCAGCCGTACTCGGATAGATGGTACGAAGTGCTGCAGTTCTGCTGGCTGCCTCCTGACAAGAGGCCAGCCGCAGAAGACGTGCACCGTCTGCTAACTTACCTGAGGATGCAGAGCCAGCGGGACTCGGAGGTCGACTTTGAACAGCAGTGGACTGCTCTCAAGCCCGACACCAACAGCAGGGACGCATCCAGCAGCGCTGCCTTCCCCATCCTTGACCACTTCGCCCGGGACCGGCTGGGTCGGGAGATGGAGGAGGTCCTCACGGTGACGGAGACCAGCCAGGGCCTGAGCTTTGAGTATGTGTGGGAGGCTGCCAAGCACGACCATTTTGATGAGCAGGGCCGGGGCCACCCAGATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCAGTGGAGGTGTTTGAGAATTCGCTTTCAGATCCTGGCCCTGGCAAGCAAGATGACAGTGGCCAGGAGGTGCCCGTGAGGGCCCCTGGGGTGGTTCCTGTGTTTGATGCACACAACCTCTCTGTTGGAAGTGACTACTACATCCAGCTGGAGGAGAAAAGCAGCAGCAATCTGGGACTGGACCCCCCTGCACTGCTCACAACTGAAGTAGATAAGCTAGAGAGGGCTGGGGCTGAGGAACCCAGGACAGAAGAGGATTTCTTCCAGAGCAGTGCTCACCCCAAAGAAGCCAGCTCTACCGAGGACTCACGTGCTACCAGCATCCCTGGGAGCCCTTTCAACCTATTTAGTGACCTTGACAAAGCAGATGACCTGCCCAGTCACCAAAAAATATTTGATCTAATGGAACTAAATGGAGTTCAAGCTGACTTTAAGCCAGCCATCTTGAGTTCAAGCCTGGATGACCCCAAGGACACCTGCCAGTCTGACAAAGAAAAGCCCCATAAGCTCTTGGACCAGGGCCCTCTGTGCTTATCAGAAAGCCTTTTGCACCAAGATCACTTTGATCCACTGAGTGTCCAAGAATTGTCAGAAAACTTTTTATTTCTTCAGGAGAAAAATCTACTGAAAGGCTCTCTGACTACCAAGGAGCAAGTGAGCGACCTTCAAACAGAACTCAAGAATGCAGGTTTTACCTCAGCACTGTTGGAGTCACCCCAGAGAGGCTCTGAAAGTTCTGAACTTGAGTTCCTGGAAAATACACTAGACTTTCCTTTGTCACAGGGAGACACGCGTGGACAGAATGAAGGTGCAGGTGTCAGGCGTCACAGTGGTACCTCACCACAGGCCTCCCCAGCCTTGCTCACAGAAGAAGGATCTCCTACTGCCCCCACAGACCCAATTCTGAAGCCAGAAGAAACCAAATCCTTTAGAGATGTCAGAGTCCCCGAGGACTCCATCTGCTTGGAGCTAGGCCCCGACCCCGTGACTGTTGGAGTTGAAATTCCTGCTACTGATGCCAAAACCCTCGATGGGGGCAACAGACCCCCAGACGTCACTTGCCAAAGCAAGGAGGCCTTGAGTCTAACCAACAGACACCCCATCCTTGTGAATGATATTACTGCTCAGGGTAGCGTGGAGAGTTGTCTTCCAGAATCGAGACAGGATTTACAAAATGAGCCATTTTCAGAAGACCCTCTTAGTGTCAGCTCACTGGAGAAACACTCGGAAGCTGCGGAGACTTTAAACCAGCTTAACTCTAAGGCTGCCCCGGAGGATGCAGCCTTGGCGTCTGCCCTCTCCTCGGATTCTACCAGCCAAGATAGCCTCTTAGAAGACAGTTTGTCAACACCCATCCCCACCTCAGAGCAGTCTGTGGAGACGCCAGACTCCCTGGATTCAGTGGATGTCCGTGAAGCATTGCTAGAGTCCCTAGGCTCCCACACCCCTCGGAAACTCTTGCCTCCCGATAAGCCTGCCGACAGCGGCTATGAGACGGAGAACCTGGAATCTCCTGAGTGGACCCTGCACCCTGCACCCGAAGGCACTGCTGACTCAGACGCAGCTGCAGCAGGTGACAGTGGCCACAGCAGTTTGCCTCCCAACCCGGTCATTGTCATCTCGGATGCAGGCGATGGCCACAGAGGTGCTGAAGGTCCTCCTCAGAGCTTCACACTTGGCCCCCAGAGTTCATATCGAGACTCTGCATACTTCTCAGACAATGACTCGGAGCCAGATAAAAAGCCCGAGGAGGTCCCAGGAACATCTGCCAATGCCCTGGTGTTGGTAAAGGGCCAGTCCCCACCTGAGTCAGTTGTCCCAGAAGAAAGCTCTGATGTCAGAGAAGGCTGCCTGGAAGCCCCACAGGACAAGCCAGATCAAAGTCGGGTGTCTACTTTGCAGAATTCTTGTCACTCAGAACTACAAGAAACATTGCAGCCCACACCAGCTGATGCTTCCAGAGAGTCCTGTCCTGTGAACGACGAGGCCAGCAGCCCCTTGAGTTTGTTGAATTCAGAACCTAGCAGCTGCGATGACCTGGACACACAGGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATAAATCTTTGCCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTGTGTGTCTGGGATGCTGGACCTCTCGGAGGATGGGATGGATGCCGATGAGGAGGATGAGAACAGCGACGACTCGGACGAGGACCTTCGAGCCTTCAACTTGCACAGCCTAAGCTCTGAGTCTGAAGACGACACGGAGCACCCTGTGCCCATCATTGTCAGTAACGATGATGGTAGGCACCTGCGGAGTTTGCTGAAACCCTCAGCTGCCGAGGCCATTGAGCAGCTGCCGGAAGACTGGAAGAAGGAAAAGAAGGCAGTGACATTTTTCGATGATGTCACCGTTTATCTGTTTGACCAG

Divergent primers for circular RNA PCR

Primer Set-1

Forward primer
Tm
Reverse primer
Tm
Product size

TGCCGGAAGACTGGAAGAAG

59.68

AGCTGGTCACTAATTCTGGAGC

60.09

147

Primer Set-2

Forward primer
Tm
Reverse primer
Tm
Product size

GCCGGAAGACTGGAAGAAGG

60.39

AGCTGGTCACTAATTCTGGAGC

60.09

146

PCR template sequence:

CTCAGCTGCCGAGGCCATTGAGCAGCTGCCGGAAGACTGGAAGAAGGAAAAGAAGGCAGTGACATTTTTCGATGATGTCACCGTTTATCTGTTTGACCAGGAGGATTACATTGAGACAGATGACAAGAAAGTTTTCCCCCTGAGATGGACTGCTCCAGAATTAGTGACCAGCTTTCAAGACAGACTCTTGACTGCAGATC

Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs

17

Interacting miRNAs (#binding sites)

mmu-miR-199a-5p(1), mmu-miR-103-3p(1), mmu-miR-205-5p(1), mmu-miR-709(1), mmu-miR-138-5p(1), mmu-miR-149-5p(1), mmu-miR-136-5p(1), mmu-miR-127-5p(1), mmu-miR-212-3p(1), mmu-miR-370-3p(1), mmu-miR-107-3p(1), mmu-miR-29b-2-5p(1), mmu-miR-669d-5p(1), mmu-miR-3065-5p(1), mmu-miR-1199-5p(1), mmu-miR-193b-3p(1), mmu-miR-542-5p(1)

siRNAs for circular RNA silencing
Junction sequence

TCTGTTTGACCAGGAGGATTACATTG

siRNA sets

AATGTAATCCTCCTGGTCA, CAATGTAATCCTCCTGGTC, TAATCCTCCTGGTCAAACA

Protein-coding potential of circular RNAs

CPAT analysis

CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length

CIRCLMTK2_3141_ORF_1

1.0396

0.336617306

1

6057

ORF sequence:

ATGAAGCTCCCAAAGCCGCAGCTGGAGCAGCCGTACTCGGATAGATGGTACGAAGTGCTGCAGTTCTGCTGGCTGCCTCCTGACAAGAGGCCAGCCGCAGAAGACGTGCACCGTCTGCTAACTTACCTGAGGATGCAGAGCCAGCGGGACTCGGAGGTCGACTTTGAACAGCAGTGGACTGCTCTCAAGCCCGACACCAACAGCAGGGACGCATCCAGCAGCGCTGCCTTCCCCATCCTTGACCACTTCGCCCGGGACCGGCTGGGTCGGGAGATGGAGGAGGTCCTCACGGTGACGGAGACCAGCCAGGGCCTGAGCTTTGAGTATGTGTGGGAGGCTGCCAAGCACGACCATTTTGATGAGCAGGGCCGGGGCCACCCAGATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCAGTGGAGGTGTTTGAGAATTCGCTTTCAGATCCTGGCCCTGGCAAGCAAGATGACAGTGGCCAGGAGGTGCCCGTGAGGGCCCCTGGGGTGGTTCCTGTGTTTGATGCACACAACCTCTCTGTTGGAAGTGACTACTACATCCAGCTGGAGGAGAAAAGCAGCAGCAATCTGGGACTGGACCCCCCTGCACTGCTCACAACTGAAGTAGATAAGCTAGAGAGGGCTGGGGCTGAGGAACCCAGGACAGAAGAGGATTTCTTCCAGAGCAGTGCTCACCCCAAAGAAGCCAGCTCTACCGAGGACTCACGTGCTACCAGCATCCCTGGGAGCCCTTTCAACCTATTTAGTGACCTTGACAAAGCAGATGACCTGCCCAGTCACCAAAAAATATTTGATCTAATGGAACTAAATGGAGTTCAAGCTGACTTTAAGCCAGCCATCTTGAGTTCAAGCCTGGATGACCCCAAGGACACCTGCCAGTCTGACAAAGAAAAGCCCCATAAGCTCTTGGACCAGGGCCCTCTGTGCTTATCAGAAAGCCTTTTGCACCAAGATCACTTTGATCCACTGAGTGTCCAAGAATTGTCAGAAAACTTTTTATTTCTTCAGGAGAAAAATCTACTGAAAGGCTCTCTGACTACCAAGGAGCAAGTGAGCGACCTTCAAACAGAACTCAAGAATGCAGGTTTTACCTCAGCACTGTTGGAGTCACCCCAGAGAGGCTCTGAAAGTTCTGAACTTGAGTTCCTGGAAAATACACTAGACTTTCCTTTGTCACAGGGAGACACGCGTGGACAGAATGAAGGTGCAGGTGTCAGGCGTCACAGTGGTACCTCACCACAGGCCTCCCCAGCCTTGCTCACAGAAGAAGGATCTCCTACTGCCCCCACAGACCCAATTCTGAAGCCAGAAGAAACCAAATCCTTTAGAGATGTCAGAGTCCCCGAGGACTCCATCTGCTTGGAGCTAGGCCCCGACCCCGTGACTGTTGGAGTTGAAATTCCTGCTACTGATGCCAAAACCCTCGATGGGGGCAACAGACCCCCAGACGTCACTTGCCAAAGCAAGGAGGCCTTGAGTCTAACCAACAGACACCCCATCCTTGTGAATGATATTACTGCTCAGGGTAGCGTGGAGAGTTGTCTTCCAGAATCGAGACAGGATTTACAAAATGAGCCATTTTCAGAAGACCCTCTTAGTGTCAGCTCACTGGAGAAACACTCGGAAGCTGCGGAGACTTTAAACCAGCTTAACTCTAAGGCTGCCCCGGAGGATGCAGCCTTGGCGTCTGCCCTCTCCTCGGATTCTACCAGCCAAGATAGCCTCTTAGAAGACAGTTTGTCAACACCCATCCCCACCTCAGAGCAGTCTGTGGAGACGCCAGACTCCCTGGATTCAGTGGATGTCCGTGAAGCATTGCTAGAGTCCCTAGGCTCCCACACCCCTCGGAAACTCTTGCCTCCCGATAAGCCTGCCGACAGCGGCTATGAGACGGAGAACCTGGAATCTCCTGAGTGGACCCTGCACCCTGCACCCGAAGGCACTGCTGACTCAGACGCAGCTGCAGCAGGTGACAGTGGCCACAGCAGTTTGCCTCCCAACCCGGTCATTGTCATCTCGGATGCAGGCGATGGCCACAGAGGTGCTGAAGGTCCTCCTCAGAGCTTCACACTTGGCCCCCAGAGTTCATATCGAGACTCTGCATACTTCTCAGACAATGACTCGGAGCCAGATAAAAAGCCCGAGGAGGTCCCAGGAACATCTGCCAATGCCCTGGTGTTGGTAAAGGGCCAGTCCCCACCTGAGTCAGTTGTCCCAGAAGAAAGCTCTGATGTCAGAGAAGGCTGCCTGGAAGCCCCACAGGACAAGCCAGATCAAAGTCGGGTGTCTACTTTGCAGAATTCTTGTCACTCAGAACTACAAGAAACATTGCAGCCCACACCAGCTGATGCTTCCAGAGAGTCCTGTCCTGTGAACGACGAGGCCAGCAGCCCCTTGAGTTTGTTGAATTCAGAACCTAGCAGCTGCGATGACCTGGACACACAGGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATAAATCTTTGCCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTGTGTGTCTGGGATGCTGGACCTCTCGGAGGATGGGATGGATGCCGATGAGGAGGATGAGAACAGCGACGACTCGGACGAGGACCTTCGAGCCTTCAACTTGCACAGCCTAAGCTCTGAGTCTGAAGACGACACGGAGCACCCTGTGCCCATCATTGTCAGTAACGATGATGGTAGGCACCTGCGGAGTTTGCTGAAACCCTCAGCTGCCGAGGCCATTGAGCAGCTGCCGGAAGACTGGAAGAAGGAAAAGAAGGCAGTGACATTTTTCGATGATGTCACCGTTTATCTGTTTGACCAGGAGGATTACATTGAGACAGATGACAAGAAAGTTTTCCCCCTGAGATGGACTGCTCCAGAATTAGTGACCAGCTTTCAAGACAGACTCTTGACTGCAGATCAGACTAAATACAGTAATATCTGGTCCTTAGGTGTAACACTTTGGGAACTCTTCAACAATGCTGCTCAGCCGTATGCAAACCTTTCTGACCTGGATGTCCTCAATCAAGTCATTCGGGAGAGGGACATGAAGCTCCCAAAGCCGCAGCTGGAGCAGCCGTACTCGGATAGATGGTACGAAGTGCTGCAGTTCTGCTGGCTGCCTCCTGACAAGAGGCCAGCCGCAGAAGACGTGCACCGTCTGCTAACTTACCTGAGGATGCAGAGCCAGCGGGACTCGGAGGTCGACTTTGAACAGCAGTGGACTGCTCTCAAGCCCGACACCAACAGCAGGGACGCATCCAGCAGCGCTGCCTTCCCCATCCTTGACCACTTCGCCCGGGACCGGCTGGGTCGGGAGATGGAGGAGGTCCTCACGGTGACGGAGACCAGCCAGGGCCTGAGCTTTGAGTATGTGTGGGAGGCTGCCAAGCACGACCATTTTGATGAGCAGGGCCGGGGCCACCCAGATGAAGCCCTGTCTTACTCCAGCATGTTCTTCCCAGTGGAGGTGTTTGAGAATTCGCTTTCAGATCCTGGCCCTGGCAAGCAAGATGACAGTGGCCAGGAGGTGCCCGTGAGGGCCCCTGGGGTGGTTCCTGTGTTTGATGCACACAACCTCTCTGTTGGAAGTGACTACTACATCCAGCTGGAGGAGAAAAGCAGCAGCAATCTGGGACTGGACCCCCCTGCACTGCTCACAACTGAAGTAGATAAGCTAGAGAGGGCTGGGGCTGAGGAACCCAGGACAGAAGAGGATTTCTTCCAGAGCAGTGCTCACCCCAAAGAAGCCAGCTCTACCGAGGACTCACGTGCTACCAGCATCCCTGGGAGCCCTTTCAACCTATTTAGTGACCTTGACAAAGCAGATGACCTGCCCAGTCACCAAAAAATATTTGATCTAATGGAACTAAATGGAGTTCAAGCTGACTTTAAGCCAGCCATCTTGAGTTCAAGCCTGGATGACCCCAAGGACACCTGCCAGTCTGACAAAGAAAAGCCCCATAAGCTCTTGGACCAGGGCCCTCTGTGCTTATCAGAAAGCCTTTTGCACCAAGATCACTTTGATCCACTGAGTGTCCAAGAATTGTCAGAAAACTTTTTATTTCTTCAGGAGAAAAATCTACTGAAAGGCTCTCTGACTACCAAGGAGCAAGTGAGCGACCTTCAAACAGAACTCAAGAATGCAGGTTTTACCTCAGCACTGTTGGAGTCACCCCAGAGAGGCTCTGAAAGTTCTGAACTTGAGTTCCTGGAAAATACACTAGACTTTCCTTTGTCACAGGGAGACACGCGTGGACAGAATGAAGGTGCAGGTGTCAGGCGTCACAGTGGTACCTCACCACAGGCCTCCCCAGCCTTGCTCACAGAAGAAGGATCTCCTACTGCCCCCACAGACCCAATTCTGAAGCCAGAAGAAACCAAATCCTTTAGAGATGTCAGAGTCCCCGAGGACTCCATCTGCTTGGAGCTAGGCCCCGACCCCGTGACTGTTGGAGTTGAAATTCCTGCTACTGATGCCAAAACCCTCGATGGGGGCAACAGACCCCCAGACGTCACTTGCCAAAGCAAGGAGGCCTTGAGTCTAACCAACAGACACCCCATCCTTGTGAATGATATTACTGCTCAGGGTAGCGTGGAGAGTTGTCTTCCAGAATCGAGACAGGATTTACAAAATGAGCCATTTTCAGAAGACCCTCTTAGTGTCAGCTCACTGGAGAAACACTCGGAAGCTGCGGAGACTTTAAACCAGCTTAACTCTAAGGCTGCCCCGGAGGATGCAGCCTTGGCGTCTGCCCTCTCCTCGGATTCTACCAGCCAAGATAGCCTCTTAGAAGACAGTTTGTCAACACCCATCCCCACCTCAGAGCAGTCTGTGGAGACGCCAGACTCCCTGGATTCAGTGGATGTCCGTGAAGCATTGCTAGAGTCCCTAGGCTCCCACACCCCTCGGAAACTCTTGCCTCCCGATAAGCCTGCCGACAGCGGCTATGAGACGGAGAACCTGGAATCTCCTGAGTGGACCCTGCACCCTGCACCCGAAGGCACTGCTGACTCAGACGCAGCTGCAGCAGGTGACAGTGGCCACAGCAGTTTGCCTCCCAACCCGGTCATTGTCATCTCGGATGCAGGCGATGGCCACAGAGGTGCTGAAGGTCCTCCTCAGAGCTTCACACTTGGCCCCCAGAGTTCATATCGAGACTCTGCATACTTCTCAGACAATGACTCGGAGCCAGATAAAAAGCCCGAGGAGGTCCCAGGAACATCTGCCAATGCCCTGGTGTTGGTAAAGGGCCAGTCCCCACCTGAGTCAGTTGTCCCAGAAGAAAGCTCTGATGTCAGAGAAGGCTGCCTGGAAGCCCCACAGGACAAGCCAGATCAAAGTCGGGTGTCTACTTTGCAGAATTCTTGTCACTCAGAACTACAAGAAACATTGCAGCCCACACCAGCTGATGCTTCCAGAGAGTCCTGTCCTGTGAACGACGAGGCCAGCAGCCCCTTGAGTTTGTTGAATTCAGAACCTAGCAGCTGCGATGACCTGGACACACAGGAAGATCGCCCATGCACCCTGGCCTCCACAGGTACAAATACCAATGAACTCCTTGCATACATGAGTTCCACACTGGATAAATCTTTGCCCAGCCACTTGGAGAGCTCCAAGCTGAAGGAGCCAGACATTGAAGGGAAATACCTTGGCAAACTTTGTGTGTCTGGGATGCTGGACCTCTCGGAGGATGGGATGGATGCCGATGAGGAGGATGAGAACAGCGACGACTCGGACGAGGACCTTCGAGCCTTCAACTTGCACAGCCTAAGCTCTGAGTCTGAAGACGACACGGAGCACCCTGTGCCCATCATTGTCAGTAACGATGATGGTAGGCACCTGCGGAGTTTGCTGAAACCCTCAGCTGCCGAGGCCATTGAGCAGCTGCCGGAAGACTGGAAGAAGGAAAAGAAGGCAGTGACATTTTTCGATGATGTCACCGTTTATCTGTTTGACCAG

Peptide sequence:

MKLPKPQLEQPYSDRWYEVLQFCWLPPDKRPAAEDVHRLLTYLRMQSQRDSEVDFEQQWTALKPDTNSRDASSSAAFPILDHFARDRLGREMEEVLTVTETSQGLSFEYVWEAAKHDHFDEQGRGHPDEALSYSSMFFPVEVFENSLSDPGPGKQDDSGQEVPVRAPGVVPVFDAHNLSVGSDYYIQLEEKSSSNLGLDPPALLTTEVDKLERAGAEEPRTEEDFFQSSAHPKEASSTEDSRATSIPGSPFNLFSDLDKADDLPSHQKIFDLMELNGVQADFKPAILSSSLDDPKDTCQSDKEKPHKLLDQGPLCLSESLLHQDHFDPLSVQELSENFLFLQEKNLLKGSLTTKEQVSDLQTELKNAGFTSALLESPQRGSESSELEFLENTLDFPLSQGDTRGQNEGAGVRRHSGTSPQASPALLTEEGSPTAPTDPILKPEETKSFRDVRVPEDSICLELGPDPVTVGVEIPATDAKTLDGGNRPPDVTCQSKEALSLTNRHPILVNDITAQGSVESCLPESRQDLQNEPFSEDPLSVSSLEKHSEAAETLNQLNSKAAPEDAALASALSSDSTSQDSLLEDSLSTPIPTSEQSVETPDSLDSVDVREALLESLGSHTPRKLLPPDKPADSGYETENLESPEWTLHPAPEGTADSDAAAAGDSGHSSLPPNPVIVISDAGDGHRGAEGPPQSFTLGPQSSYRDSAYFSDNDSEPDKKPEEVPGTSANALVLVKGQSPPESVVPEESSDVREGCLEAPQDKPDQSRVSTLQNSCHSELQETLQPTPADASRESCPVNDEASSPLSLLNSEPSSCDDLDTQEDRPCTLASTGTNTNELLAYMSSTLDKSLPSHLESSKLKEPDIEGKYLGKLCVSGMLDLSEDGMDADEEDENSDDSDEDLRAFNLHSLSSESEDDTEHPVPIIVSNDDGRHLRSLLKPSAAEAIEQLPEDWKKEKKAVTFFDDVTVYLFDQEDYIETDDKKVFPLRWTAPELVTSFQDRLLTADQTKYSNIWSLGVTLWELFNNAAQPYANLSDLDVLNQVIRERDMKLPKPQLEQPYSDRWYEVLQFCWLPPDKRPAAEDVHRLLTYLRMQSQRDSEVDFEQQWTALKPDTNSRDASSSAAFPILDHFARDRLGREMEEVLTVTETSQGLSFEYVWEAAKHDHFDEQGRGHPDEALSYSSMFFPVEVFENSLSDPGPGKQDDSGQEVPVRAPGVVPVFDAHNLSVGSDYYIQLEEKSSSNLGLDPPALLTTEVDKLERAGAEEPRTEEDFFQSSAHPKEASSTEDSRATSIPGSPFNLFSDLDKADDLPSHQKIFDLMELNGVQADFKPAILSSSLDDPKDTCQSDKEKPHKLLDQGPLCLSESLLHQDHFDPLSVQELSENFLFLQEKNLLKGSLTTKEQVSDLQTELKNAGFTSALLESPQRGSESSELEFLENTLDFPLSQGDTRGQNEGAGVRRHSGTSPQASPALLTEEGSPTAPTDPILKPEETKSFRDVRVPEDSICLELGPDPVTVGVEIPATDAKTLDGGNRPPDVTCQSKEALSLTNRHPILVNDITAQGSVESCLPESRQDLQNEPFSEDPLSVSSLEKHSEAAETLNQLNSKAAPEDAALASALSSDSTSQDSLLEDSLSTPIPTSEQSVETPDSLDSVDVREALLESLGSHTPRKLLPPDKPADSGYETENLESPEWTLHPAPEGTADSDAAAAGDSGHSSLPPNPVIVISDAGDGHRGAEGPPQSFTLGPQSSYRDSAYFSDNDSEPDKKPEEVPGTSANALVLVKGQSPPESVVPEESSDVREGCLEAPQDKPDQSRVSTLQNSCHSELQETLQPTPADASRESCPVNDEASSPLSLLNSEPSSCDDLDTQEDRPCTLASTGTNTNELLAYMSSTLDKSLPSHLESSKLKEPDIEGKYLGKLCVSGMLDLSEDGMDADEEDENSDDSDEDLRAFNLHSLSSESEDDTEHPVPIIVSNDDGRHLRSLLKPSAAEAIEQLPEDWKKEKKAVTFFDDVTVYLFDQ

IRESfinder result

IRESfinder score

0.501745503

IRES/non IRES

IRES

riboCIRC information

riboCIRC ID

NA

NA

Evidence
Peptide sequence:

NA

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Institute of Life sciences, Bhubaneswar, India

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