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mmu_circLcorl_4769
Basic information of circular RNA
PanCircBase ID:
mmu_circLcorl_4769
mm39_Chr. Position ID:
chr5|45880315|45885084|-
Gene name:
Lcorl
Transcript:
ENSMUST00000238522.2
CircRNA type:
Exonic circular (circ)RNA
Exon/Intron count:
1
Exon/intron indexes:
7
Exon/intron offsets:
0
Genomic length:
4769
Exon/intron sizes in nt:
4769
Flanking exon/introns:
chr5:45859339-45880315|chr5:45885084-45893072
Splice length:
4769
Other database IDs:
circAtlas: mmu-Lcorl_0005
circBase: hsa_circ_0125860, circAtlas: hsa-LCORL_0005, CIRCpedia: HSA_CIRCpedia_343836
Human Ortholog IDs:
Mature spliced Sequence:
TTCAACTGTTGATGCAAAATCAGAGGAAGCTACTAAAATGGAAAAAGGAAAATCAGCATTAAGCAAAGTTTTGGAATCTTTGTGCATACATCACCATCAACAAGTTTTGGCTATGTTGAAATTTCTAGTCCAAGAGCAGAATGCTGCTTCTCTTTGCTGTTGTAATTCATCATGTGCTATGTCTTCAGAATCTCAAAAGCCCCTATTGGAGGATGGTTTTCATGGTCTGTTCTGTAGCTGTGAATATAGACTGGCAGAAAGAGGGTGTTTACAGAATGAGAGACAAAGCCCTGGTCTAGTGCCTCTGCCAGTCTGTATTAAAGAAATACAGTGTTTGTCTTGTCAAACTGTAACTGTTGAACACATTAAGACAGTAATGAATCGAGGAATTGAAAACAGTTCTAATCCACACAGGTGCTGTTGTGGACAATTAGCAAAGACTCAGTCTACAAAACCAGCCTGTCACAGTCCTCCTTTGTCACGGGAAGTTTGTGATCTTTCAGTCACTCTTCAAAATACCTGTAGATCTCGAAGTCCCTCGCCCCCACCATTATCACCTGTGGAGACTGGAGGATTGGAAAAATGGAAAGACATCGTCTCAGAGCTTTCAGCTGTAGAAAATAACAAACTTGAGGCAAGCATTAACCAGCCTCCATCTCTTACACCTGCAGAGATAAGCACTCACAAATGTGGCCATGACAGCAAACTACATAAAACTAAGAAGTCTGGTAACACTGATTCTGTGCTCTTGGGGACCAGTGGTAGTTATACTGCAAATCATGAAAAGGGTGAGACAGCTGTAATTTTTCAAGATTTAATGGACCGTATTAATGAAAAATTAAAATCAATAGAAACCACAGATATATCTAACCTCATAAAATTATCTAGTACTGATTGTGATTCAGACAATGATTTTAAACTGGGAGATTTAATAACATCTCTCTTGCACAGTGCAACAGCCAGTGATTATAGTTTTATGGAACTGCTGAGTCAACATGATAAAAAGGTAGAAAATAAAATTATTCAGACAAGGTTTCGAAAACGTCAACAAACGTTACTTGCAATACACAACTCTCCTGATTCACCAGTGATCAGAAGGCAATCTTTACAGATAAAAAGAGAACTTGCCAGTTTTGATGAAAACTTTCTGAGAAGAAGGTACAGTGAAAAAAATTCAAGAAAATTATCATACAGTGATAAGATGCTTTCAGTGAACAAAGAAGAATTCCAGCCTTGTCAAGAGCCTTTAAAAATTTCAAAAAGCTTTCAAAATGAAAATCATGAAGAAACATTTACACCAAATGAGGTAGCACCATCGATTCAGGTGCCTCTTGGGAGTTTAGAAACTAACTTGGCTCTTGATCAATTTTCAGAAAATTTTAAAGCAACTTCATTTGAGAAAATGAGCCAAAGAAAATCACAGGAGAGATCTACAGCTGAGAAACCAACTGTACAAAGTAGTAGGGAAAATACAAAACTAGAAAATACTCCAACACTTTTGAGAACTGATGCTCCTCTTTTGAGCAGAACTAAACGAAATATTGTGCCTCCAGGGTGGTATTCCATATATGTAACAAACGATTCTGTTTCTAAAAAATTCCTTGAGGGCAAAAGAGTATCTGGCTCTGCTCACAGAAAAGATCTAGGAGATCCAACTGAAAGTTTTCAAAATATAGACTTAAATAAAATTGCAATGAATTCTAGTTTGCAAGTTGTTGTGGAGCGTTTAGAAGATACAATAAATATGGCTCAAAGGTCTTGGACTAGTCAAGAATTATCTGAAGGATGTAAAGCATCCAAAAAATTGATAGAAGCAGGTGATAAAGACCAAAATGCTGGGAGAGATTTGACTTTAAGTAGAATGGCTTGTAAAAATCAGGGTTTATCAAAATCTGTGTTCGCATCTAGCAGTAAAAGAAGTCATGACATGTCTGTCATGGATTTGAACAAGACACTTGATAATCTGAAGACATCACCCATTTTAGAGAAAGGTAGCTCAACAGCCAGTGTTGAAAGTTTGCCAACAAAATGCGAAGGCATTGAAAGTTCTGTTTCTAACTATTTTAGTCCTATCAAACTCATGTTTTTATCTGAGATTAAAAGCAGTGAAGGCGTCAAATACACTTTGACTTCCGTCAGCACATCACAGTCAAATGCTGATTTTGATTCTCACAAACATAAAAACCATCAGATAACTGGAAGAAAAAGAGAAACAACTGAAGATACACCAAACACTAACTTGGAAGATTATAGTTCTAATCATCATGTTTCAAACCTTCAAAGTGAATTGAACCAATTTAACTGTGTACTTGAGGCTACACCATCATCTGCAGAGTTTACTGACAATTTAAACAATGATAAGCCACAAGAAGACCCTAAGGAAAAGTCAAATGGTGCTGTTGATTTACCATATAAAAGAAAACCAGGTAGACCTAAAAAAATCGGTCCCCAAGTTGTGAAGCAGGTTAAAAGGCCAATTGGAAGACCACCAAAACCTAAAGCTGGTCAAACAAATGTCAGTGTTTCCCAAAATGAATCTTTTAACCCTAGAAAGGAAAATTCAGAGTCCTTCTTATCAGAAGTCAAAGATGTTTGCAGGAAGAGTATTATTGTCACTGTTGTTTATGGAAGGTCAAGAAGAACCAAAAGATGTGTTTCTGAAGGAAGCACGAACATCAGCAACATCTCACTGAACAGTGATGTCTCTGACTTTTCAGTTAACTCTAGTTGTCTCAGAAATACTAAAGCTCATGAGATTGGCTCTGGTGAAAGTCTGAGTGCTGGCTCAAGATTGACAACTCAAAGTGGGGTTTGTGATTCTGACTTTGAATATATTAGACCTATCAAGAGCAAGTCTATGATACCTCAGACTTCCAAGAACATTATTCGACCAAACCAAAAACCTTTATCAATTGTTAGGAAGCCTGGTCGACCTGCAAAAGTGAAAATTTCTGGTATATCTGTGACTGTTAATAGAATTTCACCTCAGGAAAGAGAAGTATGTATTAGCAGCTGCTTACCTCCTTTAGATCAGGAGATAATGTTAGAGAAAACTTGCCTAGAAGAAAAGCTTGACCAGCAGTGCAGTAATGTGGATAACATCAAGCACACCAATGTTGACATATTTAAGAATGAATCAAATAGTACTGTTGTTTCTATACCTCCAAAACATTCTATTAGGGCTAGAAAACCTTCTTTGCATTTCTTACATTCATTTGCATCTTCTGGCTCACTTACTTACAAAAATGCTCTCCGTCATAAATCATGTAAACTCCATTTGCATAAATGCAAAAATCCAAAGAAAAAATACAGGCAGTCGGGTTTTAGACTAGCTTCCAAAGGTATCCCACGATCTAGATGTTCAAAGAAAGCAAAAAAATATTTGGAAGATAAAAAATTAATGCCCATTTCTGAAGTGTCCTTGGACCCTGTAATTTCATCCAACCCTTTACTAAGGTGGTGGGCTACTTCTGCTTCAAATGATTCCTTGTTAGAGGAATTAAACAATAGATTTGAACAAATAACAAATGCGTGGGTACAGGTGAGTAAAGATGAAGCTCAAAATTTTGTTCATAAAACAGAATACACTAAAGGTGATCATTGCGAAGCAGCAAGCCCTCTGGAAACTTGTCTTCTAGAACTTGAAGTTTCACCTGTAAAAATGCTTTTTCAGAAAAAGTATAATTTGAATGAACTTTGTACCTGGTTTATGCAAACAACAGAAACACAGTCCCTTTCACTAGTTAGAAAAGCAAATGCTCGAAACCCTTTGGAAGTGATAAGCACCAAGGGCATTAAGTTAGGGGTGAAATGCTGTGGATTTAATGCCAGCCCCTTCAGGAAGCACTTTAAAAAATTTGCAGTCTCTTCTCCTTCAAAACCAGCTGGGAAATTTCATATACTACATAAAATGGTTGGCTCACCACTCTTAAATGTGAAAAGTAATTTAACATTAGCAAGGTTGAAAAGGACTGAGTTTAAGAATTTGCACTGTGAGAGGTGGAGAAGAGAAGAAAGGCCATACAGCCACAGAACAGTTGATTGGAGCTCAAAAAGAAGGAACTTAAGATTGTTCTGCCAGAATCCATCTTGGACTAACTCAGAGGGGCAGACAAATGCAGAGACATCACTCAATGGGAAAGGCACAGTAGGTAACCAGTGGGCCTCACCCCCAGAACCCAGAGTCACCTTTGCTAAAAAGAGGGTGGCAGTACATGACTTCAGAACACATGCTAGTTTAGAGAGTAAGTTTAATGGAACAGGGGGTGGCCAGACTGACTCTGAAAAGGAACAAATAATGGAAAGTGTATCTTCCCATAATTGGAGGTCAAAAACTTTAAAAGACTGTAGAATATTTTTGAGGAAGATCAACTGTCTTGAACACAGAAACACTTTTAAGCTAAATACAATAATTTATTCTCCTGAATCTGTTGACAGTGGAGGTAGTCAGGCACAACCAGAAGAATCAAAGCGTTTTAGTTTAAGGTCCCATTCTGCAAGGCAAAATTCCTTTAAAAAGCAAAATGAAGAAAGAGCAAATCCCAAAGCAAATAGTCCTGCAAGTAGTAGATTGACTGGTGAGCTCGACAGCAGTCACTTAAGTAAGCATGTTAACTTTGACAAGAACCCCGATCATTCTGAGGCTCTTAGCAAATTAAGCAAAAGAAAAAGACCACCATGGAAGACCACAGAAATGTCAGCAAAAAGGCATAAACGACAGTCTTGCAACAGTGGACAAATGGCAAACTATTGTACAAAATCCCAAGTAG
Divergent primers for circular RNA PCR
Primer Set-1
Forward primer
Tm
Reverse primer
Tm
Product size
GCAACAGTGGACAAATGGCA
59.61
GGTGATGTATGCACAAAGATTCCA
59.6
140
Primer Set-2
Forward primer
Tm
Reverse primer
Tm
Product size
GCAACAGTGGACAAATGGCA
59.61
TGGTGATGTATGCACAAAGATTCC
59.6
141
PCR template sequence:
AGACCACCATGGAAGACCACAGAAATGTCAGCAAAAAGGCATAAACGACAGTCTTGCAACAGTGGACAAATGGCAAACTATTGTACAAAATCCCAAGTAGTTCAACTGTTGATGCAAAATCAGAGGAAGCTACTAAAATGGAAAAAGGAAAATCAGCATTAAGCAAAGTTTTGGAATCTTTGTGCATACATCACCATCAA
Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs
47
Interacting miRNAs (#binding sites)
mmu-miR-335-3p(5), mmu-miR-134-5p(2), mmu-miR-30e-5p(2), mmu-miR-30a-5p(2), mmu-miR-29b-1-5p(2), mmu-miR-20b-5p(1), mmu-miR-155-5p(1), mmu-miR-200a-3p(1), mmu-miR-141-3p(1), mmu-miR-27b-3p(1), mmu-miR-27a-3p(1), mmu-miR-106a-5p(1), mmu-miR-93-5p(1), mmu-miR-20a-5p(1), mmu-miR-17-5p(1), mmu-miR-103-3p(1), mmu-miR-135a-5p(1), mmu-miR-19b-3p(1), mmu-miR-101a-3p(1), mmu-miR-211-5p(1), mmu-miR-322-5p(1), mmu-miR-29b-3p(1), mmu-miR-29a-3p(1), mmu-miR-29c-3p(1), mmu-miR-130a-3p(1), mmu-miR-19a-3p(1), mmu-miR-30c-5p(1), mmu-miR-216a-5p(1), mmu-miR-132-3p(1), mmu-miR-30d-5p(1), mmu-miR-30b-5p(1), mmu-miR-199b-3p(1), mmu-miR-218-5p(1), mmu-miR-199a-3p(1), mmu-miR-107-3p(1), mmu-miR-384-3p(1), mmu-miR-29b-2-5p(1), mmu-miR-129-5p(1), mmu-miR-207(1), mmu-miR-5099(1), mmu-miR-5101(1), mmu-miR-532-5p(1), mmu-miR-350-3p(1), mmu-miR-1904(1), mmu-miR-296-3p(1), mmu-miR-202-3p(1), mmu-miR-338-3p(1)
siRNAs for circular RNA silencing
Junction sequence
AAATCCCAAGTAGTTCAACTGTTGAT
siRNA sets
AACAGTTGAACTACTTGGG,ACAGTTGAACTACTTGGGA,CAACAGTTGAACTACTTGG
Protein-coding potential of circular RNAs
CPAT analysis
CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length
CIRCLCORL_4769_ORF_1
0.794
-0.127582468
1
4794
ORF sequence:
ATGGAAAAAGGAAAATCAGCATTAAGCAAAGTTTTGGAATCTTTGTGCATACATCACCATCAACAAGTTTTGGCTATGTTGAAATTTCTAGTCCAAGAGCAGAATGCTGCTTCTCTTTGCTGTTGTAATTCATCATGTGCTATGTCTTCAGAATCTCAAAAGCCCCTATTGGAGGATGGTTTTCATGGTCTGTTCTGTAGCTGTGAATATAGACTGGCAGAAAGAGGGTGTTTACAGAATGAGAGACAAAGCCCTGGTCTAGTGCCTCTGCCAGTCTGTATTAAAGAAATACAGTGTTTGTCTTGTCAAACTGTAACTGTTGAACACATTAAGACAGTAATGAATCGAGGAATTGAAAACAGTTCTAATCCACACAGGTGCTGTTGTGGACAATTAGCAAAGACTCAGTCTACAAAACCAGCCTGTCACAGTCCTCCTTTGTCACGGGAAGTTTGTGATCTTTCAGTCACTCTTCAAAATACCTGTAGATCTCGAAGTCCCTCGCCCCCACCATTATCACCTGTGGAGACTGGAGGATTGGAAAAATGGAAAGACATCGTCTCAGAGCTTTCAGCTGTAGAAAATAACAAACTTGAGGCAAGCATTAACCAGCCTCCATCTCTTACACCTGCAGAGATAAGCACTCACAAATGTGGCCATGACAGCAAACTACATAAAACTAAGAAGTCTGGTAACACTGATTCTGTGCTCTTGGGGACCAGTGGTAGTTATACTGCAAATCATGAAAAGGGTGAGACAGCTGTAATTTTTCAAGATTTAATGGACCGTATTAATGAAAAATTAAAATCAATAGAAACCACAGATATATCTAACCTCATAAAATTATCTAGTACTGATTGTGATTCAGACAATGATTTTAAACTGGGAGATTTAATAACATCTCTCTTGCACAGTGCAACAGCCAGTGATTATAGTTTTATGGAACTGCTGAGTCAACATGATAAAAAGGTAGAAAATAAAATTATTCAGACAAGGTTTCGAAAACGTCAACAAACGTTACTTGCAATACACAACTCTCCTGATTCACCAGTGATCAGAAGGCAATCTTTACAGATAAAAAGAGAACTTGCCAGTTTTGATGAAAACTTTCTGAGAAGAAGGTACAGTGAAAAAAATTCAAGAAAATTATCATACAGTGATAAGATGCTTTCAGTGAACAAAGAAGAATTCCAGCCTTGTCAAGAGCCTTTAAAAATTTCAAAAAGCTTTCAAAATGAAAATCATGAAGAAACATTTACACCAAATGAGGTAGCACCATCGATTCAGGTGCCTCTTGGGAGTTTAGAAACTAACTTGGCTCTTGATCAATTTTCAGAAAATTTTAAAGCAACTTCATTTGAGAAAATGAGCCAAAGAAAATCACAGGAGAGATCTACAGCTGAGAAACCAACTGTACAAAGTAGTAGGGAAAATACAAAACTAGAAAATACTCCAACACTTTTGAGAACTGATGCTCCTCTTTTGAGCAGAACTAAACGAAATATTGTGCCTCCAGGGTGGTATTCCATATATGTAACAAACGATTCTGTTTCTAAAAAATTCCTTGAGGGCAAAAGAGTATCTGGCTCTGCTCACAGAAAAGATCTAGGAGATCCAACTGAAAGTTTTCAAAATATAGACTTAAATAAAATTGCAATGAATTCTAGTTTGCAAGTTGTTGTGGAGCGTTTAGAAGATACAATAAATATGGCTCAAAGGTCTTGGACTAGTCAAGAATTATCTGAAGGATGTAAAGCATCCAAAAAATTGATAGAAGCAGGTGATAAAGACCAAAATGCTGGGAGAGATTTGACTTTAAGTAGAATGGCTTGTAAAAATCAGGGTTTATCAAAATCTGTGTTCGCATCTAGCAGTAAAAGAAGTCATGACATGTCTGTCATGGATTTGAACAAGACACTTGATAATCTGAAGACATCACCCATTTTAGAGAAAGGTAGCTCAACAGCCAGTGTTGAAAGTTTGCCAACAAAATGCGAAGGCATTGAAAGTTCTGTTTCTAACTATTTTAGTCCTATCAAACTCATGTTTTTATCTGAGATTAAAAGCAGTGAAGGCGTCAAATACACTTTGACTTCCGTCAGCACATCACAGTCAAATGCTGATTTTGATTCTCACAAACATAAAAACCATCAGATAACTGGAAGAAAAAGAGAAACAACTGAAGATACACCAAACACTAACTTGGAAGATTATAGTTCTAATCATCATGTTTCAAACCTTCAAAGTGAATTGAACCAATTTAACTGTGTACTTGAGGCTACACCATCATCTGCAGAGTTTACTGACAATTTAAACAATGATAAGCCACAAGAAGACCCTAAGGAAAAGTCAAATGGTGCTGTTGATTTACCATATAAAAGAAAACCAGGTAGACCTAAAAAAATCGGTCCCCAAGTTGTGAAGCAGGTTAAAAGGCCAATTGGAAGACCACCAAAACCTAAAGCTGGTCAAACAAATGTCAGTGTTTCCCAAAATGAATCTTTTAACCCTAGAAAGGAAAATTCAGAGTCCTTCTTATCAGAAGTCAAAGATGTTTGCAGGAAGAGTATTATTGTCACTGTTGTTTATGGAAGGTCAAGAAGAACCAAAAGATGTGTTTCTGAAGGAAGCACGAACATCAGCAACATCTCACTGAACAGTGATGTCTCTGACTTTTCAGTTAACTCTAGTTGTCTCAGAAATACTAAAGCTCATGAGATTGGCTCTGGTGAAAGTCTGAGTGCTGGCTCAAGATTGACAACTCAAAGTGGGGTTTGTGATTCTGACTTTGAATATATTAGACCTATCAAGAGCAAGTCTATGATACCTCAGACTTCCAAGAACATTATTCGACCAAACCAAAAACCTTTATCAATTGTTAGGAAGCCTGGTCGACCTGCAAAAGTGAAAATTTCTGGTATATCTGTGACTGTTAATAGAATTTCACCTCAGGAAAGAGAAGTATGTATTAGCAGCTGCTTACCTCCTTTAGATCAGGAGATAATGTTAGAGAAAACTTGCCTAGAAGAAAAGCTTGACCAGCAGTGCAGTAATGTGGATAACATCAAGCACACCAATGTTGACATATTTAAGAATGAATCAAATAGTACTGTTGTTTCTATACCTCCAAAACATTCTATTAGGGCTAGAAAACCTTCTTTGCATTTCTTACATTCATTTGCATCTTCTGGCTCACTTACTTACAAAAATGCTCTCCGTCATAAATCATGTAAACTCCATTTGCATAAATGCAAAAATCCAAAGAAAAAATACAGGCAGTCGGGTTTTAGACTAGCTTCCAAAGGTATCCCACGATCTAGATGTTCAAAGAAAGCAAAAAAATATTTGGAAGATAAAAAATTAATGCCCATTTCTGAAGTGTCCTTGGACCCTGTAATTTCATCCAACCCTTTACTAAGGTGGTGGGCTACTTCTGCTTCAAATGATTCCTTGTTAGAGGAATTAAACAATAGATTTGAACAAATAACAAATGCGTGGGTACAGGTGAGTAAAGATGAAGCTCAAAATTTTGTTCATAAAACAGAATACACTAAAGGTGATCATTGCGAAGCAGCAAGCCCTCTGGAAACTTGTCTTCTAGAACTTGAAGTTTCACCTGTAAAAATGCTTTTTCAGAAAAAGTATAATTTGAATGAACTTTGTACCTGGTTTATGCAAACAACAGAAACACAGTCCCTTTCACTAGTTAGAAAAGCAAATGCTCGAAACCCTTTGGAAGTGATAAGCACCAAGGGCATTAAGTTAGGGGTGAAATGCTGTGGATTTAATGCCAGCCCCTTCAGGAAGCACTTTAAAAAATTTGCAGTCTCTTCTCCTTCAAAACCAGCTGGGAAATTTCATATACTACATAAAATGGTTGGCTCACCACTCTTAAATGTGAAAAGTAATTTAACATTAGCAAGGTTGAAAAGGACTGAGTTTAAGAATTTGCACTGTGAGAGGTGGAGAAGAGAAGAAAGGCCATACAGCCACAGAACAGTTGATTGGAGCTCAAAAAGAAGGAACTTAAGATTGTTCTGCCAGAATCCATCTTGGACTAACTCAGAGGGGCAGACAAATGCAGAGACATCACTCAATGGGAAAGGCACAGTAGGTAACCAGTGGGCCTCACCCCCAGAACCCAGAGTCACCTTTGCTAAAAAGAGGGTGGCAGTACATGACTTCAGAACACATGCTAGTTTAGAGAGTAAGTTTAATGGAACAGGGGGTGGCCAGACTGACTCTGAAAAGGAACAAATAATGGAAAGTGTATCTTCCCATAATTGGAGGTCAAAAACTTTAAAAGACTGTAGAATATTTTTGAGGAAGATCAACTGTCTTGAACACAGAAACACTTTTAAGCTAAATACAATAATTTATTCTCCTGAATCTGTTGACAGTGGAGGTAGTCAGGCACAACCAGAAGAATCAAAGCGTTTTAGTTTAAGGTCCCATTCTGCAAGGCAAAATTCCTTTAAAAAGCAAAATGAAGAAAGAGCAAATCCCAAAGCAAATAGTCCTGCAAGTAGTAGATTGACTGGTGAGCTCGACAGCAGTCACTTAAGTAAGCATGTTAACTTTGACAAGAACCCCGATCATTCTGAGGCTCTTAGCAAATTAAGCAAAAGAAAAAGACCACCATGGAAGACCACAGAAATGTCAGCAAAAAGGCATAAACGACAGTCTTGCAACAGTGGACAAATGGCAAACTATTGTACAAAATCCCAAGTAGTTCAACTGTTGATGCAAAATCAGAGGAAGCTACTAAAATGGAAAAAGGAAAATCAGCATTAA
Peptide sequence:
MEKGKSALSKVLESLCIHHHQQVLAMLKFLVQEQNAASLCCCNSSCAMSSESQKPLLEDGFHGLFCSCEYRLAERGCLQNERQSPGLVPLPVCIKEIQCLSCQTVTVEHIKTVMNRGIENSSNPHRCCCGQLAKTQSTKPACHSPPLSREVCDLSVTLQNTCRSRSPSPPPLSPVETGGLEKWKDIVSELSAVENNKLEASINQPPSLTPAEISTHKCGHDSKLHKTKKSGNTDSVLLGTSGSYTANHEKGETAVIFQDLMDRINEKLKSIETTDISNLIKLSSTDCDSDNDFKLGDLITSLLHSATASDYSFMELLSQHDKKVENKIIQTRFRKRQQTLLAIHNSPDSPVIRRQSLQIKRELASFDENFLRRRYSEKNSRKLSYSDKMLSVNKEEFQPCQEPLKISKSFQNENHEETFTPNEVAPSIQVPLGSLETNLALDQFSENFKATSFEKMSQRKSQERSTAEKPTVQSSRENTKLENTPTLLRTDAPLLSRTKRNIVPPGWYSIYVTNDSVSKKFLEGKRVSGSAHRKDLGDPTESFQNIDLNKIAMNSSLQVVVERLEDTINMAQRSWTSQELSEGCKASKKLIEAGDKDQNAGRDLTLSRMACKNQGLSKSVFASSSKRSHDMSVMDLNKTLDNLKTSPILEKGSSTASVESLPTKCEGIESSVSNYFSPIKLMFLSEIKSSEGVKYTLTSVSTSQSNADFDSHKHKNHQITGRKRETTEDTPNTNLEDYSSNHHVSNLQSELNQFNCVLEATPSSAEFTDNLNNDKPQEDPKEKSNGAVDLPYKRKPGRPKKIGPQVVKQVKRPIGRPPKPKAGQTNVSVSQNESFNPRKENSESFLSEVKDVCRKSIIVTVVYGRSRRTKRCVSEGSTNISNISLNSDVSDFSVNSSCLRNTKAHEIGSGESLSAGSRLTTQSGVCDSDFEYIRPIKSKSMIPQTSKNIIRPNQKPLSIVRKPGRPAKVKISGISVTVNRISPQEREVCISSCLPPLDQEIMLEKTCLEEKLDQQCSNVDNIKHTNVDIFKNESNSTVVSIPPKHSIRARKPSLHFLHSFASSGSLTYKNALRHKSCKLHLHKCKNPKKKYRQSGFRLASKGIPRSRCSKKAKKYLEDKKLMPISEVSLDPVISSNPLLRWWATSASNDSLLEELNNRFEQITNAWVQVSKDEAQNFVHKTEYTKGDHCEAASPLETCLLELEVSPVKMLFQKKYNLNELCTWFMQTTETQSLSLVRKANARNPLEVISTKGIKLGVKCCGFNASPFRKHFKKFAVSSPSKPAGKFHILHKMVGSPLLNVKSNLTLARLKRTEFKNLHCERWRREERPYSHRTVDWSSKRRNLRLFCQNPSWTNSEGQTNAETSLNGKGTVGNQWASPPEPRVTFAKKRVAVHDFRTHASLESKFNGTGGGQTDSEKEQIMESVSSHNWRSKTLKDCRIFLRKINCLEHRNTFKLNTIIYSPESVDSGGSQAQPEESKRFSLRSHSARQNSFKKQNEERANPKANSPASSRLTGELDSSHLSKHVNFDKNPDHSEALSKLSKRKRPPWKTTEMSAKRHKRQSCNSGQMANYCTKSQVVQLLMQNQRKLLKWKKENQH
IRESfinder result
IRESfinder score
0.780247229
IRES/non IRES
IRES
riboCIRC information
riboCIRC ID
NA
NA
Evidence
Peptide sequence:
NA
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