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mmu_circFryl_5334
Basic information of circular RNA
PanCircBase ID:
mmu_circFryl_5334
mm39_Chr. Position ID:
chr5|73211395|73257814|-
Gene name:
Fryl
Transcript:
ENSMUST00000101127.12
CircRNA type:
Exonic circular (circ)RNA
Exon/Intron count:
33
Exon/intron indexes:
53,52,51,50,49,48,47,46,45,44,43,42,41,40,39,38,37,36,35,34,33,32,31,30,29,28,27,26,25,24,23,22,21
Exon/intron offsets:
0,477,663,1472,3671,5326,10453,10886,13221,14671,15830,17052,18683,19789,20576,21835,22605,26911,28744,29075,31294,32474,32825,34316,35042,36548,39070,41363,42221,43321,44106,45893,46233
Genomic length:
46419
Exon/intron sizes in nt:
1,77,75,16,21,98,14,11,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,000
Flanking exon/introns:
chr5:73207848-73211395|chr5:73257814-73258796
Splice length:
5334
Other database IDs:
Human Ortholog IDs:
Mature spliced Sequence:
CACGGCATTGCTAATGGAGGCCCTCACCCCCCTCCTCTGGAAAGGAACCCATATTCCACTGTGTTCCATGTGGTCGAAGGCTTTGCCCTGGTCATCCTCTGTAGCAGTCGGCCTGCCACGAGAAGACTGGCAGTCAGCGTCCTTCGAGAGATACGGGCTTTATTTGCACTTTTGGAGGTACCTAAGGGTGATGATGAGTTAGCCATAGATGTGATGGACAGACTGAGCCCATCCATTCTGGAGAGCTTCATCCACCTCACGGGGGCCGATCAGACTACTTTGCTGTATTGCCCTAGCTCTGTAGATCTGCAGACATTAGCAGATTGGAACTCTTCTCCCATCAGCCACCAGTTTGATGTGATCAGCCCCTCACACATTTGGATATTTGCACATGTGACCCAAGGCCAAGACCCATGGATTATAAGTCTCTCCAGTTTCCTAAAGCAAGAAAACCTTCCCAAACACTGCTCTACAGCCGTGAGCTATGCGTGGATGTTCGCATACACCAGGCTGCAGCTCTTGTCCCCCCAGGTGGATATAAATAGCCCCATCAATGCTAAGAAAGTAAATGCCACCACGAGCAGCGACTCGTACATTGGCCTGTGGAGAAACTACCTGGTCCTCTGCTGCAGCGCAGCCACCTCCCCGTCCCCATCAGCACCCGCAGGCTCCGTGAGATGCTCTCCTCCCGAGACGCTGGCGTCCACCCCTGACAGTGGCTACAGCATCGATTCCAAGATCGTTGGCATCCCGTCCCCTTCTTCCCTGTTTAAGCACATAGTTCCAATGATGCGCTCTGAGAGCATGGAGATCACAGAGTCCCTCGTTCTAGGCCTCGGCAGGACCAACCCGGGAGTCTTTAGAGAATTAATAGAGGAGTTGCATCCCATCATTAAAGAAGCACTTGAAAGAAGGCCAGAGAATATGAAACGGCGCAGGCGTCGAGACATTTTACGAGTACAGCTGGTACGGATATTTGAGCTGTTGGCGGATGCTGGTGTCATTAGCCACAGTGCAAGCGGCGGCCTTGATAGCGAAACTCACTTCCTCAACAACACTCTCTTGGAGTACGTGGACTTAACGCGACAACTTCTGGAAGCAGAAAACGAGAAGGACTCCGACACCCTGAAGGATATCCGATGCCATTTCAGTGCCTTAGTGGCGAATATCATTCAGAATGTTCCGGTGCACCAGAGGAGAAGCATCTTTCCCCAGCAGAGCCTGCGTCACAGCCTGTTCATGTTGTTCAGCCACTGGGCGGGCCCCTTTAGCATCATGTTCACGCCCCTGGACAGATACAGTGACAGGAATATGCAGATCAACAGACACCAGTACTGTGCGTTAAAGGCTATGTCTGCTGTACTGTGTTGTGGCCCTGTTGCAGATAATGTGGGACTGTCATCAGATGGCTATTTGTACAAATGGCTGGATAACATTTTGGACTCTCTGGATAAAAAGGTTCACCAGTTGGGCTGTGAAGCAGTCACGTTGCTGCTGGAGCTGAACCCTGATCAGAGCAGCCTGATGTACTGGGCCGTGGACCGATGCTACACCGGCTCCCGGAGAGTAGCAGCCGGCTGCTTCAAAGCCATTGCCAACGTGTTCCAGAACAGGGATTACCAGTGTGACACAGTGATGCTCCTAAACCTGATACTGTTTAAAGCAGCTGACTCTTCTAGAAGTATCTATGAAGTTGCTATGCAACTCTTGCAGATCCTGGAGCCGAAGATGTTTCGCTATGCTCACAAACTGGAGGTTCAGAGAACGGATGGAGTCCTCAGTCAGCTGTCCCCGCTGCCACATCTCTATTCTGTGTCTTATTACCAGTTGTCTGAGGAGCTAGCCCGAGCATATCCAGAGCTCACTCTCGCCATATTCTCAGAGATCAGCCAGCGGATCCAGACGGCACACCCCGCGGGGCGGCAGGCCATGCTTCATTACCTACTGCCCTGGATGAACAACATCGAGCTGGTCGACCTCAAACCTCTGCCTTCAGGGAGGCGGCAGGATGAAGATGAAGATGACTCCTTGAAAGACCGAGAGCTCATGGTGACCAGCAGGCGCTGGCTGAGAGGAGAAGGCTGGGGCTCCCCACAGGCCACCGCCATGGTGTTGAACAATCTCATGTACATGACAGCGAAGTACGGCGATGAGCTGGCCTGGTCGGAGGTGGAGAATGTGTGGACCACCCTTGCAGACGGCTGGCCAAAGAACCTGAAAATTATTTTGCACTTTCTGATCAGCATCTGCGGAGTGAATAGCGAACCAAGCCTCTTGCCTTACGTGAAGAAAGTCATCGTCTACCTGGGTCGAGACAAAACCATGCAGCTGCTGGAAGAGCTGGTGAGCGAGCTGCAGCTCACGGACCCCGTCAGTTCCGGCGTCACGCACATGGATAACCCGCCCTACTACCGCATCACTTCCAGCTGTAAAATCCCTTCCGTCACCTCAGGAACTACTTCCAGTAGCAATACAATGGTCGCTCCCACAGATGGCAACCCTGACAGTAAGGCCCTAAAGGAGAACTTTGAAGAGAGCTATGTGCACCTGGACATCTACGGGGGACTGAACAGTCATTTAAACCGGCAACACCACAGACTGGAGTCCCGATACAGTAGCAGCTCCGGAGGGTCTTACGAAGAGGAGAAAAGTGACTCAATGCCACTTTATTCTAATTGGCGCCTGAAAGTGATGGAGCACAACCAAGGAGAGCCACTGCCCTTCCCGCCAGCTGGAGGCTGCTGGTCGCCACTGGTGGATTACGTGCCTGAAACAGCATCTCCTGGATTGCCTCTACACAGGTGTAACATAGCCGTGATCCTGCTGACAGATCTGATCATTGACCACAGCGTGAAGGTGGAATGGGGAAGTTACCTCCACCTGCTGCTTCATGCAATTTTTATAGGGTTTGATCACTGCCACCCTGAGGTGTACGAGCACTGCAAGCGCCTGCTGCTGCACTTACTGATAGTGATGGGACCCAACAGTGACATCCGGACTGTCGCCTCTGTCCTCCTCAGGGACAAGGAATTCAATGAGCCCAGGGTGTTGACAGTCAAGCAGACGGCACACTCAGATTACACGTTCACAGCAGGCATTAACGATTTTACACCCGATTACCAGCCGTCCCCTATGACCGACTCAGGGCTTAGCTCCAGTTCTACCTCCTCTAGTATCAGCTTAGGAAACAACAGCGCTGCCATTTCACACCTCCACACCACCCTCCTCGGCGAGGTGGACCTCTCAGTGGAGCAGGATGGAAAAGTCAAAACCCTCATGGAGTTCATTACCTCAAGAAAACGAGGGCCCCTTTGGAACCATGAGGACGTTTCTTCCAAGAACCCTAGCATCAAGAGTGCTGATCAGCTCGCCACGTTCCTGAAGCACGTGGTTTCCGTCTTCAAGCAGTCAAATGCAGAAGGAATACACTTGGAGCGTCATCTCAGCGAGGTGGCCCTGCAGACGGCCCTTTCGTGTTCTTCCCGACACTATGCTGGGCGATCCTTCCAGATTTTCAGGGCACTGAAGCAGCCCCTGTCTGCAGACACACTCTCCGATGTCCTCTCCCGGCTGGTGGAGACTGTAGGGGACCCCGGAGAGGATGCACAGGGATTTGTGATTGAACTGCTTCTCACCTTGGAATCTGCAATTGATACCTTGGCTGAAACCATGAAGCACTATGACCTGCTGTCTGCCCTCTCTCAATCCTCATACCACGATCCTGTCATGGGAAACAAGTATGCAGCTAACAGGAAAAGCACTGGCCAGCTCAATCTAAGCACAAGTCCCATTAACAGCAGCGGCCATTTGGGATGCAACGGGGACACAAGAAGTAACTCTTTGAGGTTAAGTCTAGTTGGTGACCGCAGAGGTGACCGGCGGCGGAGTAACACACTGGACATAACGGATGGACGGATAAACCACGGTGGTAGCTTGGCGAGGACTCGAAGCCTTTCCTCGCTGAGAGAGAAAGGTGTGTACGACACGCAGCCCCCGACGGAGCCGAGCAACCTGATGGCCACCATCTTTTGGATAGCAACATCTCTGTTAGAATCCGACTATGAATATGAATACCTCCTGGCTCTCAGGCTTCTGAGCAAACTGCTCACCCACTTGCCTCTGGATAAGTCAGAGAGCCGGGAGAAGATCGAGAACGTACAGAGCAAGTTGAAATGGAGTAACTTCCCCGGCCTTCAGCAGCTCTTCCTTAAGGGCTTTACCTCAGTGTCTACCCAAGAGATGACCGTGCACCTCCTCAGTCAGCTCATTTCCGTCTCCAAACACACACTGGTGGATCCGTCCCAGGTGTCAGGCTTTCCTCTTAACATCCTCTGCTTACTGCCTCACCTAATCCAGCATTTTGACAGCCCAACTCAGTTTTGCAAAGAGACAGCTAGCCGGATAGCAAAGGTCTGTGCGGAAGAGAAGTGCCCGACGCTGGTGAACCTGGCTCACATGATGAGTTTGTACAGCACACATACCTACTCCAGAGACTGTTCCAACTGGATCAACGTGGTGTGCCGGTACCTGCACGACTCTTTCTCAGAGGCGACCTTCAGTCTTGTGACTTACCTGGCAGAGCTGTTAGAAAAGGGACTGTCCAGCATGCAGCAGTCGTTGCTACAGATCATCTACAGTCTGTTGAGTCACATCGACTTGTCTGCGGCCCCGGTCAAGCAGTTTAATCTGGAGATCATAAAGATCATTGGCAAATACGTACAGAGCCCGTACTGGAAGGAAGCCCTCAACATCCTGAAGCTGGTGGTGTCTCGCTCTGCAAGTCTTGTCGTCCCCAATGACATCCCCAAGGCCTACGGAGTGGACGTAGGCTCTCCCGAAATCTCCTTCGCTAAAATTTTCAATAACGTCTCGAAGGAGCTGCCCGGCAAGACCTTAGATTTTCACTTTGACATCTCTGAGACACCTATCATTGGGAACAAGTATGGAGGCCAACACAGTGCCGCGGGAAGGAATGGGAAGGCAAAGGTGATCGCAGTCACCAGGAGCACGTCCTCCACCTCCTCTGGCTCCACATCCAACGCCCTAGTTCCTGTCAGCTGGAAAAGGCCACAGTTATCACAGCGGAGAACGAGAGAGAAGCTGATGAGCGTGCTTTCCCTCTGTGGCCCCGAATCTGGCCTCCCCAAGAATCCCTCCGTTGTGTTTTCTTCAAATGAGGATTTGGAAGTCGGGGACCAACAGACCAGCTTGATCTCCACCACCGAGGACATAATTCAAGAAGAAGAAGTTGCCGTCGAAGACAACAGCAGTGAGCAGCAGTTTGGCGTCTTCAAGGACTTCGACTTCTTGGATGTTGAATTGGAGGATGCAGAG
Divergent primers for circular RNA PCR
Primer Set-1
Forward primer
Tm
Reverse primer
Tm
Product size
GCAGTTTGGCGTCTTCAAGG
60.04
GCAAAGCCTTCGACCACATG
60.11
144
Primer Set-2
Forward primer
Tm
Reverse primer
Tm
Product size
GCAGTTTGGCGTCTTCAAGG
60.04
AGCCTTCGACCACATGGAAC
60.32
140
PCR template sequence:
TCAAGAAGAAGAAGTTGCCGTCGAAGACAACAGCAGTGAGCAGCAGTTTGGCGTCTTCAAGGACTTCGACTTCTTGGATGTTGAATTGGAGGATGCAGAGCACGGCATTGCTAATGGAGGCCCTCACCCCCCTCCTCTGGAAAGGAACCCATATTCCACTGTGTTCCATGTGGTCGAAGGCTTTGCCCTGGTCATCCTCT
Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs
55
Interacting miRNAs (#binding sites)
mmu-miR-20b-5p(2), mmu-miR-134-5p(2), mmu-miR-106a-5p(2), mmu-miR-20a-5p(2), mmu-miR-101a-3p(2), mmu-miR-136-5p(2), mmu-miR-541-5p(2), mmu-miR-297a-5p(2), mmu-miR-207(2), mmu-miR-670-5p(2), mmu-miR-1904(2), mmu-miR-574-5p(2), mmu-miR-338-3p(2), mmu-miR-210-3p(1), mmu-miR-16-5p(1), mmu-miR-15a-5p(1), mmu-miR-17-5p(1), mmu-miR-34c-5p(1), mmu-miR-34a-5p(1), mmu-miR-31-5p(1), mmu-miR-19b-3p(1), mmu-miR-211-5p(1), mmu-miR-204-5p(1), mmu-miR-322-5p(1), mmu-miR-15b-5p(1), mmu-miR-106b-5p(1), mmu-miR-19a-3p(1), mmu-miR-298-5p(1), mmu-miR-196a-5p(1), mmu-miR-709(1), mmu-miR-324-5p(1), mmu-miR-143-3p(1), mmu-miR-214-3p(1), mmu-miR-24-3p(1), mmu-miR-503-5p(1), mmu-miR-127-3p(1), mmu-miR-431-5p(1), mmu-miR-351-5p(1), mmu-miR-212-3p(1), mmu-miR-182-5p(1), mmu-miR-301b-3p(1), mmu-miR-721(1), mmu-miR-382-5p(1), mmu-miR-370-3p(1), mmu-miR-425-5p(1), mmu-miR-301a-3p(1), mmu-miR-383-5p(1), mmu-miR-499-5p(1), mmu-miR-29b-2-5p(1), mmu-miR-466a-5p(1), mmu-miR-1187(1), mmu-miR-466p-5p(1), mmu-miR-673-5p(1), mmu-miR-452-3p(1), mmu-miR-350-3p(1)
siRNAs for circular RNA silencing
Junction sequence
GGAGGATGCAGAGCACGGCATTGCTA
siRNA sets
NA
Protein-coding potential of circular RNAs
CPAT analysis
CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length
CIRCFRYL_5334_ORF_1
1.0827
0.308172173
1
10455
ORF sequence:
ATGGACAGACTGAGCCCATCCATTCTGGAGAGCTTCATCCACCTCACGGGGGCCGATCAGACTACTTTGCTGTATTGCCCTAGCTCTGTAGATCTGCAGACATTAGCAGATTGGAACTCTTCTCCCATCAGCCACCAGTTTGATGTGATCAGCCCCTCACACATTTGGATATTTGCACATGTGACCCAAGGCCAAGACCCATGGATTATAAGTCTCTCCAGTTTCCTAAAGCAAGAAAACCTTCCCAAACACTGCTCTACAGCCGTGAGCTATGCGTGGATGTTCGCATACACCAGGCTGCAGCTCTTGTCCCCCCAGGTGGATATAAATAGCCCCATCAATGCTAAGAAAGTAAATGCCACCACGAGCAGCGACTCGTACATTGGCCTGTGGAGAAACTACCTGGTCCTCTGCTGCAGCGCAGCCACCTCCCCGTCCCCATCAGCACCCGCAGGCTCCGTGAGATGCTCTCCTCCCGAGACGCTGGCGTCCACCCCTGACAGTGGCTACAGCATCGATTCCAAGATCGTTGGCATCCCGTCCCCTTCTTCCCTGTTTAAGCACATAGTTCCAATGATGCGCTCTGAGAGCATGGAGATCACAGAGTCCCTCGTTCTAGGCCTCGGCAGGACCAACCCGGGAGTCTTTAGAGAATTAATAGAGGAGTTGCATCCCATCATTAAAGAAGCACTTGAAAGAAGGCCAGAGAATATGAAACGGCGCAGGCGTCGAGACATTTTACGAGTACAGCTGGTACGGATATTTGAGCTGTTGGCGGATGCTGGTGTCATTAGCCACAGTGCAAGCGGCGGCCTTGATAGCGAAACTCACTTCCTCAACAACACTCTCTTGGAGTACGTGGACTTAACGCGACAACTTCTGGAAGCAGAAAACGAGAAGGACTCCGACACCCTGAAGGATATCCGATGCCATTTCAGTGCCTTAGTGGCGAATATCATTCAGAATGTTCCGGTGCACCAGAGGAGAAGCATCTTTCCCCAGCAGAGCCTGCGTCACAGCCTGTTCATGTTGTTCAGCCACTGGGCGGGCCCCTTTAGCATCATGTTCACGCCCCTGGACAGATACAGTGACAGGAATATGCAGATCAACAGACACCAGTACTGTGCGTTAAAGGCTATGTCTGCTGTACTGTGTTGTGGCCCTGTTGCAGATAATGTGGGACTGTCATCAGATGGCTATTTGTACAAATGGCTGGATAACATTTTGGACTCTCTGGATAAAAAGGTTCACCAGTTGGGCTGTGAAGCAGTCACGTTGCTGCTGGAGCTGAACCCTGATCAGAGCAGCCTGATGTACTGGGCCGTGGACCGATGCTACACCGGCTCCCGGAGAGTAGCAGCCGGCTGCTTCAAAGCCATTGCCAACGTGTTCCAGAACAGGGATTACCAGTGTGACACAGTGATGCTCCTAAACCTGATACTGTTTAAAGCAGCTGACTCTTCTAGAAGTATCTATGAAGTTGCTATGCAACTCTTGCAGATCCTGGAGCCGAAGATGTTTCGCTATGCTCACAAACTGGAGGTTCAGAGAACGGATGGAGTCCTCAGTCAGCTGTCCCCGCTGCCACATCTCTATTCTGTGTCTTATTACCAGTTGTCTGAGGAGCTAGCCCGAGCATATCCAGAGCTCACTCTCGCCATATTCTCAGAGATCAGCCAGCGGATCCAGACGGCACACCCCGCGGGGCGGCAGGCCATGCTTCATTACCTACTGCCCTGGATGAACAACATCGAGCTGGTCGACCTCAAACCTCTGCCTTCAGGGAGGCGGCAGGATGAAGATGAAGATGACTCCTTGAAAGACCGAGAGCTCATGGTGACCAGCAGGCGCTGGCTGAGAGGAGAAGGCTGGGGCTCCCCACAGGCCACCGCCATGGTGTTGAACAATCTCATGTACATGACAGCGAAGTACGGCGATGAGCTGGCCTGGTCGGAGGTGGAGAATGTGTGGACCACCCTTGCAGACGGCTGGCCAAAGAACCTGAAAATTATTTTGCACTTTCTGATCAGCATCTGCGGAGTGAATAGCGAACCAAGCCTCTTGCCTTACGTGAAGAAAGTCATCGTCTACCTGGGTCGAGACAAAACCATGCAGCTGCTGGAAGAGCTGGTGAGCGAGCTGCAGCTCACGGACCCCGTCAGTTCCGGCGTCACGCACATGGATAACCCGCCCTACTACCGCATCACTTCCAGCTGTAAAATCCCTTCCGTCACCTCAGGAACTACTTCCAGTAGCAATACAATGGTCGCTCCCACAGATGGCAACCCTGACAGTAAGGCCCTAAAGGAGAACTTTGAAGAGAGCTATGTGCACCTGGACATCTACGGGGGACTGAACAGTCATTTAAACCGGCAACACCACAGACTGGAGTCCCGATACAGTAGCAGCTCCGGAGGGTCTTACGAAGAGGAGAAAAGTGACTCAATGCCACTTTATTCTAATTGGCGCCTGAAAGTGATGGAGCACAACCAAGGAGAGCCACTGCCCTTCCCGCCAGCTGGAGGCTGCTGGTCGCCACTGGTGGATTACGTGCCTGAAACAGCATCTCCTGGATTGCCTCTACACAGGTGTAACATAGCCGTGATCCTGCTGACAGATCTGATCATTGACCACAGCGTGAAGGTGGAATGGGGAAGTTACCTCCACCTGCTGCTTCATGCAATTTTTATAGGGTTTGATCACTGCCACCCTGAGGTGTACGAGCACTGCAAGCGCCTGCTGCTGCACTTACTGATAGTGATGGGACCCAACAGTGACATCCGGACTGTCGCCTCTGTCCTCCTCAGGGACAAGGAATTCAATGAGCCCAGGGTGTTGACAGTCAAGCAGACGGCACACTCAGATTACACGTTCACAGCAGGCATTAACGATTTTACACCCGATTACCAGCCGTCCCCTATGACCGACTCAGGGCTTAGCTCCAGTTCTACCTCCTCTAGTATCAGCTTAGGAAACAACAGCGCTGCCATTTCACACCTCCACACCACCCTCCTCGGCGAGGTGGACCTCTCAGTGGAGCAGGATGGAAAAGTCAAAACCCTCATGGAGTTCATTACCTCAAGAAAACGAGGGCCCCTTTGGAACCATGAGGACGTTTCTTCCAAGAACCCTAGCATCAAGAGTGCTGATCAGCTCGCCACGTTCCTGAAGCACGTGGTTTCCGTCTTCAAGCAGTCAAATGCAGAAGGAATACACTTGGAGCGTCATCTCAGCGAGGTGGCCCTGCAGACGGCCCTTTCGTGTTCTTCCCGACACTATGCTGGGCGATCCTTCCAGATTTTCAGGGCACTGAAGCAGCCCCTGTCTGCAGACACACTCTCCGATGTCCTCTCCCGGCTGGTGGAGACTGTAGGGGACCCCGGAGAGGATGCACAGGGATTTGTGATTGAACTGCTTCTCACCTTGGAATCTGCAATTGATACCTTGGCTGAAACCATGAAGCACTATGACCTGCTGTCTGCCCTCTCTCAATCCTCATACCACGATCCTGTCATGGGAAACAAGTATGCAGCTAACAGGAAAAGCACTGGCCAGCTCAATCTAAGCACAAGTCCCATTAACAGCAGCGGCCATTTGGGATGCAACGGGGACACAAGAAGTAACTCTTTGAGGTTAAGTCTAGTTGGTGACCGCAGAGGTGACCGGCGGCGGAGTAACACACTGGACATAACGGATGGACGGATAAACCACGGTGGTAGCTTGGCGAGGACTCGAAGCCTTTCCTCGCTGAGAGAGAAAGGTGTGTACGACACGCAGCCCCCGACGGAGCCGAGCAACCTGATGGCCACCATCTTTTGGATAGCAACATCTCTGTTAGAATCCGACTATGAATATGAATACCTCCTGGCTCTCAGGCTTCTGAGCAAACTGCTCACCCACTTGCCTCTGGATAAGTCAGAGAGCCGGGAGAAGATCGAGAACGTACAGAGCAAGTTGAAATGGAGTAACTTCCCCGGCCTTCAGCAGCTCTTCCTTAAGGGCTTTACCTCAGTGTCTACCCAAGAGATGACCGTGCACCTCCTCAGTCAGCTCATTTCCGTCTCCAAACACACACTGGTGGATCCGTCCCAGGTGTCAGGCTTTCCTCTTAACATCCTCTGCTTACTGCCTCACCTAATCCAGCATTTTGACAGCCCAACTCAGTTTTGCAAAGAGACAGCTAGCCGGATAGCAAAGGTCTGTGCGGAAGAGAAGTGCCCGACGCTGGTGAACCTGGCTCACATGATGAGTTTGTACAGCACACATACCTACTCCAGAGACTGTTCCAACTGGATCAACGTGGTGTGCCGGTACCTGCACGACTCTTTCTCAGAGGCGACCTTCAGTCTTGTGACTTACCTGGCAGAGCTGTTAGAAAAGGGACTGTCCAGCATGCAGCAGTCGTTGCTACAGATCATCTACAGTCTGTTGAGTCACATCGACTTGTCTGCGGCCCCGGTCAAGCAGTTTAATCTGGAGATCATAAAGATCATTGGCAAATACGTACAGAGCCCGTACTGGAAGGAAGCCCTCAACATCCTGAAGCTGGTGGTGTCTCGCTCTGCAAGTCTTGTCGTCCCCAATGACATCCCCAAGGCCTACGGAGTGGACGTAGGCTCTCCCGAAATCTCCTTCGCTAAAATTTTCAATAACGTCTCGAAGGAGCTGCCCGGCAAGACCTTAGATTTTCACTTTGACATCTCTGAGACACCTATCATTGGGAACAAGTATGGAGGCCAACACAGTGCCGCGGGAAGGAATGGGAAGGCAAAGGTGATCGCAGTCACCAGGAGCACGTCCTCCACCTCCTCTGGCTCCACATCCAACGCCCTAGTTCCTGTCAGCTGGAAAAGGCCACAGTTATCACAGCGGAGAACGAGAGAGAAGCTGATGAGCGTGCTTTCCCTCTGTGGCCCCGAATCTGGCCTCCCCAAGAATCCCTCCGTTGTGTTTTCTTCAAATGAGGATTTGGAAGTCGGGGACCAACAGACCAGCTTGATCTCCACCACCGAGGACATAATTCAAGAAGAAGAAGTTGCCGTCGAAGACAACAGCAGTGAGCAGCAGTTTGGCGTCTTCAAGGACTTCGACTTCTTGGATGTTGAATTGGAGGATGCAGAGCACGGCATTGCTAATGGAGGCCCTCACCCCCCTCCTCTGGAAAGGAACCCATATTCCACTGTGTTCCATGTGGTCGAAGGCTTTGCCCTGGTCATCCTCTGTAGCAGTCGGCCTGCCACGAGAAGACTGGCAGTCAGCGTCCTTCGAGAGATACGGGCTTTATTTGCACTTTTGGAGGTACCTAAGGGTGATGATGAGTTAGCCATAGATGTGATGGACAGACTGAGCCCATCCATTCTGGAGAGCTTCATCCACCTCACGGGGGCCGATCAGACTACTTTGCTGTATTGCCCTAGCTCTGTAGATCTGCAGACATTAGCAGATTGGAACTCTTCTCCCATCAGCCACCAGTTTGATGTGATCAGCCCCTCACACATTTGGATATTTGCACATGTGACCCAAGGCCAAGACCCATGGATTATAAGTCTCTCCAGTTTCCTAAAGCAAGAAAACCTTCCCAAACACTGCTCTACAGCCGTGAGCTATGCGTGGATGTTCGCATACACCAGGCTGCAGCTCTTGTCCCCCCAGGTGGATATAAATAGCCCCATCAATGCTAAGAAAGTAAATGCCACCACGAGCAGCGACTCGTACATTGGCCTGTGGAGAAACTACCTGGTCCTCTGCTGCAGCGCAGCCACCTCCCCGTCCCCATCAGCACCCGCAGGCTCCGTGAGATGCTCTCCTCCCGAGACGCTGGCGTCCACCCCTGACAGTGGCTACAGCATCGATTCCAAGATCGTTGGCATCCCGTCCCCTTCTTCCCTGTTTAAGCACATAGTTCCAATGATGCGCTCTGAGAGCATGGAGATCACAGAGTCCCTCGTTCTAGGCCTCGGCAGGACCAACCCGGGAGTCTTTAGAGAATTAATAGAGGAGTTGCATCCCATCATTAAAGAAGCACTTGAAAGAAGGCCAGAGAATATGAAACGGCGCAGGCGTCGAGACATTTTACGAGTACAGCTGGTACGGATATTTGAGCTGTTGGCGGATGCTGGTGTCATTAGCCACAGTGCAAGCGGCGGCCTTGATAGCGAAACTCACTTCCTCAACAACACTCTCTTGGAGTACGTGGACTTAACGCGACAACTTCTGGAAGCAGAAAACGAGAAGGACTCCGACACCCTGAAGGATATCCGATGCCATTTCAGTGCCTTAGTGGCGAATATCATTCAGAATGTTCCGGTGCACCAGAGGAGAAGCATCTTTCCCCAGCAGAGCCTGCGTCACAGCCTGTTCATGTTGTTCAGCCACTGGGCGGGCCCCTTTAGCATCATGTTCACGCCCCTGGACAGATACAGTGACAGGAATATGCAGATCAACAGACACCAGTACTGTGCGTTAAAGGCTATGTCTGCTGTACTGTGTTGTGGCCCTGTTGCAGATAATGTGGGACTGTCATCAGATGGCTATTTGTACAAATGGCTGGATAACATTTTGGACTCTCTGGATAAAAAGGTTCACCAGTTGGGCTGTGAAGCAGTCACGTTGCTGCTGGAGCTGAACCCTGATCAGAGCAGCCTGATGTACTGGGCCGTGGACCGATGCTACACCGGCTCCCGGAGAGTAGCAGCCGGCTGCTTCAAAGCCATTGCCAACGTGTTCCAGAACAGGGATTACCAGTGTGACACAGTGATGCTCCTAAACCTGATACTGTTTAAAGCAGCTGACTCTTCTAGAAGTATCTATGAAGTTGCTATGCAACTCTTGCAGATCCTGGAGCCGAAGATGTTTCGCTATGCTCACAAACTGGAGGTTCAGAGAACGGATGGAGTCCTCAGTCAGCTGTCCCCGCTGCCACATCTCTATTCTGTGTCTTATTACCAGTTGTCTGAGGAGCTAGCCCGAGCATATCCAGAGCTCACTCTCGCCATATTCTCAGAGATCAGCCAGCGGATCCAGACGGCACACCCCGCGGGGCGGCAGGCCATGCTTCATTACCTACTGCCCTGGATGAACAACATCGAGCTGGTCGACCTCAAACCTCTGCCTTCAGGGAGGCGGCAGGATGAAGATGAAGATGACTCCTTGAAAGACCGAGAGCTCATGGTGACCAGCAGGCGCTGGCTGAGAGGAGAAGGCTGGGGCTCCCCACAGGCCACCGCCATGGTGTTGAACAATCTCATGTACATGACAGCGAAGTACGGCGATGAGCTGGCCTGGTCGGAGGTGGAGAATGTGTGGACCACCCTTGCAGACGGCTGGCCAAAGAACCTGAAAATTATTTTGCACTTTCTGATCAGCATCTGCGGAGTGAATAGCGAACCAAGCCTCTTGCCTTACGTGAAGAAAGTCATCGTCTACCTGGGTCGAGACAAAACCATGCAGCTGCTGGAAGAGCTGGTGAGCGAGCTGCAGCTCACGGACCCCGTCAGTTCCGGCGTCACGCACATGGATAACCCGCCCTACTACCGCATCACTTCCAGCTGTAAAATCCCTTCCGTCACCTCAGGAACTACTTCCAGTAGCAATACAATGGTCGCTCCCACAGATGGCAACCCTGACAGTAAGGCCCTAAAGGAGAACTTTGAAGAGAGCTATGTGCACCTGGACATCTACGGGGGACTGAACAGTCATTTAAACCGGCAACACCACAGACTGGAGTCCCGATACAGTAGCAGCTCCGGAGGGTCTTACGAAGAGGAGAAAAGTGACTCAATGCCACTTTATTCTAATTGGCGCCTGAAAGTGATGGAGCACAACCAAGGAGAGCCACTGCCCTTCCCGCCAGCTGGAGGCTGCTGGTCGCCACTGGTGGATTACGTGCCTGAAACAGCATCTCCTGGATTGCCTCTACACAGGTGTAACATAGCCGTGATCCTGCTGACAGATCTGATCATTGACCACAGCGTGAAGGTGGAATGGGGAAGTTACCTCCACCTGCTGCTTCATGCAATTTTTATAGGGTTTGATCACTGCCACCCTGAGGTGTACGAGCACTGCAAGCGCCTGCTGCTGCACTTACTGATAGTGATGGGACCCAACAGTGACATCCGGACTGTCGCCTCTGTCCTCCTCAGGGACAAGGAATTCAATGAGCCCAGGGTGTTGACAGTCAAGCAGACGGCACACTCAGATTACACGTTCACAGCAGGCATTAACGATTTTACACCCGATTACCAGCCGTCCCCTATGACCGACTCAGGGCTTAGCTCCAGTTCTACCTCCTCTAGTATCAGCTTAGGAAACAACAGCGCTGCCATTTCACACCTCCACACCACCCTCCTCGGCGAGGTGGACCTCTCAGTGGAGCAGGATGGAAAAGTCAAAACCCTCATGGAGTTCATTACCTCAAGAAAACGAGGGCCCCTTTGGAACCATGAGGACGTTTCTTCCAAGAACCCTAGCATCAAGAGTGCTGATCAGCTCGCCACGTTCCTGAAGCACGTGGTTTCCGTCTTCAAGCAGTCAAATGCAGAAGGAATACACTTGGAGCGTCATCTCAGCGAGGTGGCCCTGCAGACGGCCCTTTCGTGTTCTTCCCGACACTATGCTGGGCGATCCTTCCAGATTTTCAGGGCACTGAAGCAGCCCCTGTCTGCAGACACACTCTCCGATGTCCTCTCCCGGCTGGTGGAGACTGTAGGGGACCCCGGAGAGGATGCACAGGGATTTGTGATTGAACTGCTTCTCACCTTGGAATCTGCAATTGATACCTTGGCTGAAACCATGAAGCACTATGACCTGCTGTCTGCCCTCTCTCAATCCTCATACCACGATCCTGTCATGGGAAACAAGTATGCAGCTAACAGGAAAAGCACTGGCCAGCTCAATCTAAGCACAAGTCCCATTAACAGCAGCGGCCATTTGGGATGCAACGGGGACACAAGAAGTAACTCTTTGAGGTTAAGTCTAGTTGGTGACCGCAGAGGTGACCGGCGGCGGAGTAACACACTGGACATAACGGATGGACGGATAAACCACGGTGGTAGCTTGGCGAGGACTCGAAGCCTTTCCTCGCTGAGAGAGAAAGGTGTGTACGACACGCAGCCCCCGACGGAGCCGAGCAACCTGATGGCCACCATCTTTTGGATAGCAACATCTCTGTTAGAATCCGACTATGAATATGAATACCTCCTGGCTCTCAGGCTTCTGAGCAAACTGCTCACCCACTTGCCTCTGGATAAGTCAGAGAGCCGGGAGAAGATCGAGAACGTACAGAGCAAGTTGAAATGGAGTAACTTCCCCGGCCTTCAGCAGCTCTTCCTTAAGGGCTTTACCTCAGTGTCTACCCAAGAGATGACCGTGCACCTCCTCAGTCAGCTCATTTCCGTCTCCAAACACACACTGGTGGATCCGTCCCAGGTGTCAGGCTTTCCTCTTAACATCCTCTGCTTACTGCCTCACCTAATCCAGCATTTTGACAGCCCAACTCAGTTTTGCAAAGAGACAGCTAGCCGGATAGCAAAGGTCTGTGCGGAAGAGAAGTGCCCGACGCTGGTGAACCTGGCTCACATGATGAGTTTGTACAGCACACATACCTACTCCAGAGACTGTTCCAACTGGATCAACGTGGTGTGCCGGTACCTGCACGACTCTTTCTCAGAGGCGACCTTCAGTCTTGTGACTTACCTGGCAGAGCTGTTAGAAAAGGGACTGTCCAGCATGCAGCAGTCGTTGCTACAGATCATCTACAGTCTGTTGAGTCACATCGACTTGTCTGCGGCCCCGGTCAAGCAGTTTAATCTGGAGATCATAAAGATCATTGGCAAATACGTACAGAGCCCGTACTGGAAGGAAGCCCTCAACATCCTGAAGCTGGTGGTGTCTCGCTCTGCAAGTCTTGTCGTCCCCAATGACATCCCCAAGGCCTACGGAGTGGACGTAGGCTCTCCCGAAATCTCCTTCGCTAAAATTTTCAATAACGTCTCGAAGGAGCTGCCCGGCAAGACCTTAGATTTTCACTTTGACATCTCTGAGACACCTATCATTGGGAACAAGTATGGAGGCCAACACAGTGCCGCGGGAAGGAATGGGAAGGCAAAGGTGATCGCAGTCACCAGGAGCACGTCCTCCACCTCCTCTGGCTCCACATCCAACGCCCTAGTTCCTGTCAGCTGGAAAAGGCCACAGTTATCACAGCGGAGAACGAGAGAGAAGCTGATGAGCGTGCTTTCCCTCTGTGGCCCCGAATCTGGCCTCCCCAAGAATCCCTCCGTTGTGTTTTCTTCAAATGAGGATTTGGAAGTCGGGGACCAACAGACCAGCTTGATCTCCACCACCGAGGACATAATTCAAGAAGAAGAAGTTGCCGTCGAAGACAACAGCAGTGAGCAGCAGTTTGGCGTCTTCAAGGACTTCGACTTCTTGGATGTTGAATTGGAGGATGCAGAG
Peptide sequence:
MDRLSPSILESFIHLTGADQTTLLYCPSSVDLQTLADWNSSPISHQFDVISPSHIWIFAHVTQGQDPWIISLSSFLKQENLPKHCSTAVSYAWMFAYTRLQLLSPQVDINSPINAKKVNATTSSDSYIGLWRNYLVLCCSAATSPSPSAPAGSVRCSPPETLASTPDSGYSIDSKIVGIPSPSSLFKHIVPMMRSESMEITESLVLGLGRTNPGVFRELIEELHPIIKEALERRPENMKRRRRRDILRVQLVRIFELLADAGVISHSASGGLDSETHFLNNTLLEYVDLTRQLLEAENEKDSDTLKDIRCHFSALVANIIQNVPVHQRRSIFPQQSLRHSLFMLFSHWAGPFSIMFTPLDRYSDRNMQINRHQYCALKAMSAVLCCGPVADNVGLSSDGYLYKWLDNILDSLDKKVHQLGCEAVTLLLELNPDQSSLMYWAVDRCYTGSRRVAAGCFKAIANVFQNRDYQCDTVMLLNLILFKAADSSRSIYEVAMQLLQILEPKMFRYAHKLEVQRTDGVLSQLSPLPHLYSVSYYQLSEELARAYPELTLAIFSEISQRIQTAHPAGRQAMLHYLLPWMNNIELVDLKPLPSGRRQDEDEDDSLKDRELMVTSRRWLRGEGWGSPQATAMVLNNLMYMTAKYGDELAWSEVENVWTTLADGWPKNLKIILHFLISICGVNSEPSLLPYVKKVIVYLGRDKTMQLLEELVSELQLTDPVSSGVTHMDNPPYYRITSSCKIPSVTSGTTSSSNTMVAPTDGNPDSKALKENFEESYVHLDIYGGLNSHLNRQHHRLESRYSSSSGGSYEEEKSDSMPLYSNWRLKVMEHNQGEPLPFPPAGGCWSPLVDYVPETASPGLPLHRCNIAVILLTDLIIDHSVKVEWGSYLHLLLHAIFIGFDHCHPEVYEHCKRLLLHLLIVMGPNSDIRTVASVLLRDKEFNEPRVLTVKQTAHSDYTFTAGINDFTPDYQPSPMTDSGLSSSSTSSSISLGNNSAAISHLHTTLLGEVDLSVEQDGKVKTLMEFITSRKRGPLWNHEDVSSKNPSIKSADQLATFLKHVVSVFKQSNAEGIHLERHLSEVALQTALSCSSRHYAGRSFQIFRALKQPLSADTLSDVLSRLVETVGDPGEDAQGFVIELLLTLESAIDTLAETMKHYDLLSALSQSSYHDPVMGNKYAANRKSTGQLNLSTSPINSSGHLGCNGDTRSNSLRLSLVGDRRGDRRRSNTLDITDGRINHGGSLARTRSLSSLREKGVYDTQPPTEPSNLMATIFWIATSLLESDYEYEYLLALRLLSKLLTHLPLDKSESREKIENVQSKLKWSNFPGLQQLFLKGFTSVSTQEMTVHLLSQLISVSKHTLVDPSQVSGFPLNILCLLPHLIQHFDSPTQFCKETASRIAKVCAEEKCPTLVNLAHMMSLYSTHTYSRDCSNWINVVCRYLHDSFSEATFSLVTYLAELLEKGLSSMQQSLLQIIYSLLSHIDLSAAPVKQFNLEIIKIIGKYVQSPYWKEALNILKLVVSRSASLVVPNDIPKAYGVDVGSPEISFAKIFNNVSKELPGKTLDFHFDISETPIIGNKYGGQHSAAGRNGKAKVIAVTRSTSSTSSGSTSNALVPVSWKRPQLSQRRTREKLMSVLSLCGPESGLPKNPSVVFSSNEDLEVGDQQTSLISTTEDIIQEEEVAVEDNSSEQQFGVFKDFDFLDVELEDAEHGIANGGPHPPPLERNPYSTVFHVVEGFALVILCSSRPATRRLAVSVLREIRALFALLEVPKGDDELAIDVMDRLSPSILESFIHLTGADQTTLLYCPSSVDLQTLADWNSSPISHQFDVISPSHIWIFAHVTQGQDPWIISLSSFLKQENLPKHCSTAVSYAWMFAYTRLQLLSPQVDINSPINAKKVNATTSSDSYIGLWRNYLVLCCSAATSPSPSAPAGSVRCSPPETLASTPDSGYSIDSKIVGIPSPSSLFKHIVPMMRSESMEITESLVLGLGRTNPGVFRELIEELHPIIKEALERRPENMKRRRRRDILRVQLVRIFELLADAGVISHSASGGLDSETHFLNNTLLEYVDLTRQLLEAENEKDSDTLKDIRCHFSALVANIIQNVPVHQRRSIFPQQSLRHSLFMLFSHWAGPFSIMFTPLDRYSDRNMQINRHQYCALKAMSAVLCCGPVADNVGLSSDGYLYKWLDNILDSLDKKVHQLGCEAVTLLLELNPDQSSLMYWAVDRCYTGSRRVAAGCFKAIANVFQNRDYQCDTVMLLNLILFKAADSSRSIYEVAMQLLQILEPKMFRYAHKLEVQRTDGVLSQLSPLPHLYSVSYYQLSEELARAYPELTLAIFSEISQRIQTAHPAGRQAMLHYLLPWMNNIELVDLKPLPSGRRQDEDEDDSLKDRELMVTSRRWLRGEGWGSPQATAMVLNNLMYMTAKYGDELAWSEVENVWTTLADGWPKNLKIILHFLISICGVNSEPSLLPYVKKVIVYLGRDKTMQLLEELVSELQLTDPVSSGVTHMDNPPYYRITSSCKIPSVTSGTTSSSNTMVAPTDGNPDSKALKENFEESYVHLDIYGGLNSHLNRQHHRLESRYSSSSGGSYEEEKSDSMPLYSNWRLKVMEHNQGEPLPFPPAGGCWSPLVDYVPETASPGLPLHRCNIAVILLTDLIIDHSVKVEWGSYLHLLLHAIFIGFDHCHPEVYEHCKRLLLHLLIVMGPNSDIRTVASVLLRDKEFNEPRVLTVKQTAHSDYTFTAGINDFTPDYQPSPMTDSGLSSSSTSSSISLGNNSAAISHLHTTLLGEVDLSVEQDGKVKTLMEFITSRKRGPLWNHEDVSSKNPSIKSADQLATFLKHVVSVFKQSNAEGIHLERHLSEVALQTALSCSSRHYAGRSFQIFRALKQPLSADTLSDVLSRLVETVGDPGEDAQGFVIELLLTLESAIDTLAETMKHYDLLSALSQSSYHDPVMGNKYAANRKSTGQLNLSTSPINSSGHLGCNGDTRSNSLRLSLVGDRRGDRRRSNTLDITDGRINHGGSLARTRSLSSLREKGVYDTQPPTEPSNLMATIFWIATSLLESDYEYEYLLALRLLSKLLTHLPLDKSESREKIENVQSKLKWSNFPGLQQLFLKGFTSVSTQEMTVHLLSQLISVSKHTLVDPSQVSGFPLNILCLLPHLIQHFDSPTQFCKETASRIAKVCAEEKCPTLVNLAHMMSLYSTHTYSRDCSNWINVVCRYLHDSFSEATFSLVTYLAELLEKGLSSMQQSLLQIIYSLLSHIDLSAAPVKQFNLEIIKIIGKYVQSPYWKEALNILKLVVSRSASLVVPNDIPKAYGVDVGSPEISFAKIFNNVSKELPGKTLDFHFDISETPIIGNKYGGQHSAAGRNGKAKVIAVTRSTSSTSSGSTSNALVPVSWKRPQLSQRRTREKLMSVLSLCGPESGLPKNPSVVFSSNEDLEVGDQQTSLISTTEDIIQEEEVAVEDNSSEQQFGVFKDFDFLDVELEDAE
IRESfinder result
IRESfinder score
0.486178495
IRES/non IRES
non-IRES
riboCIRC information
riboCIRC ID
NA
NA
Evidence
Peptide sequence:
NA
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