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mmu_circDst_5082
Basic information of circular RNA
PanCircBase ID:
mmu_circDst_5082
mm39_Chr. Position ID:
chr1|34236281|34268327|+
Gene name:
Dst
Transcript:
ENSMUST00000183034.5
CircRNA type:
Exonic circular (circ)RNA
Exon/Intron count:
17
Exon/intron indexes:
44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60
Exon/intron offsets:
0,1317,2091,3669,5244,11353,13953,15021,15701,17333,18285,20609,21134,22195,26603,28308,30574
Genomic length:
32046
Exon/intron sizes in nt:
15,32,34,26,75,46,17,70,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,000
Flanking exon/introns:
chr1:34235142-34236281|chr1:34268327-34281699
Splice length:
5082
Other database IDs:
circAtlas: mmu-Dst_0122
circAtlas: hsa-SCAF8_0001, CIRCpedia: HSA_CIRCpedia_55317
Human Ortholog IDs:
Mature spliced Sequence:
GTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGGCTGTGTGATCTCCTCACCCAGACTGAAAACCGCCTAATTAGTAACCAGGAAGCCTTTGTGATTGGAGACGGCACGGTGGAGTTACAGAAGTACCAGTCCAAGCAAGAGGAATTACAGAGAGATATGCAAGGAAGTACACAGGCAATGGAAGAAATAGTGCGAAACACAGAACTCTTTTTAAAAGAGAGCGGTGACGAGTTGTCCCAAGCGGATAGAGCTTTGATTGAGCAGAAACTGAACGAGGTGAAGATGAAGTGTGCGCAGCTGAACTTAAAGGCTGAGCAGTCGAGAAAGGAGTTGGATAAGGCAGTGACTACGGCCCTCAAGGAGGAGACTGAAAAGGTTGCAGCTGTGAGGCAGCTGGAAGAGAGCAAAACCAAGATAGAAAATCTTTTGAACTGGCTGTCAAATGTTGAGGAAGACTCCGAAGGGGTGTGGACGAAGCACACACAACCCATGGAGCAGAACGGAACCTATTTGCATGAAGGTGATAGCAAGTTAGGAGCTGGCGAAGAGGATGAAGTCAATGGTAACCTGCTGGAGACAGATGCTGAAGGGCACAGTGAGGCCACGAAGGGGAATCTGAACCAGCAGTATGAGAAAGTCAAGGCCCAGCACGGAAAGATCATGGCTCAGCACCAGGCGGTCCTCCTAGCCACGCAGTCGGCCCAGGTGCTGCTTGAGAAACAGGGCCACTATCTGTCCCCCGAGGAGAAGGAGAAGCTGCAGAAGAACACGCAGGAGCTGAAGGTGCATTACGAGAAGGTGCTGGCCGAGTGCGAGAAGAAGGTGAAGCTGACGCACTCCCTGCAGGAGGAGCTGGAGAAGTTTGACACCGACTACAGCGAGTTTGAGCACTGGCTACAGCAGTCCGAGCAAGAACTGGCGAACCTGGAGGCAGGTGCGGACGACCTCAGCGGGCTCATGGACAAGCTGACGAGGCAGAAGAGCTTCTCAGAGGACGTCATTTCTCACAAAGGCGACTTGAGGTACATCACCATTTCCGGAAACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAGAGACAGTGACAGGATCGGCAAGGACAGCGTCGAGACTTCCGCAACCCACAGAGAAGTTCAGACCAAACTGGACCAGGTTACAGACCGCTTCAGGTCTCTCTACTCTAAGTGCAGTGTTCTTGGAAATAACCTCAAAGACCTGGTGGATCAATACCAGCAGTATGAAGATGCTTCCTGCGGCCTTCTCTCCGGGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCCCATTGCTTTGGACCCCAAAAATCTGCAAAGGCAGCTGGAAGAGACCAAGGCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGAGAAGCTGAAGAAAACCGCAGAGGTACTCTTGGATGCCAAGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGAAGACGCTTGATGACATTGTCGGGAGATACGATGATCTGTCCAAGTGTGTGAACGAACGGAATGAAAAGCTCCAGATCACTCTGACCCGCTCCCTGAGTGTGCAGGACGCTTTGGATGAGATGCTGGACTGGATGGGAAGTGTGGAAAGCTCCCTGGTCAAGCCAGGTCAAGTGCCACTAAACTCCACAGCGCTCCAGGATCTCATCAGTAAAGACACCATGCTGGAGCAGGATATTACGGGTCGTCAAAGCAGCATAAATGCCATGAACGAAAAGGTGAAGACATTTATAGAGACGACAGACCCGTCCACAGCCTCCTCCCTGCAAGCGAAAATGAAGGATCTGTCTGCTCGCTTTTCCGAAGCAAGTCAGAAACACAAGGAAAAGCTAGCCAAGATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTCAGACAAGCTCCAGACGTTTCTAGAGACACAGAGCCAGGCGCTCACCGAGGTGGCCATGCCAGGAAAGGATGTTCCGGAGCTGTCTCAGCATATGCAGGAATCAACTGCTAAATTCTTAGAACACAGGAAAGATCTCGAAGCTTTGCACAGCCTCCTGAAAGAGATATCCAGCCATGGCTTACCAGGGGACAAAGCTCTGGTGTTTGAGAAAACTAATAACTTGTCAAGGAAATTCAAAGAAATGGAGGATACTATCCAAGAAAAGAAAGACGCTCTAAGTTCTTGTCAGGAGCAGCTGAGTGCTTTTCAAACCCTCGCTCAGTCACTGAAAACATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTGTGAAGCCTTCTCTTGGCACAGAGGACTTGAGAAAATCTCTGGAAGAAACCAAGAAATTACAAGAAAAGTGGAATCTGAAAGCACCAGAAATTCACAAAGCAAACAACAGTGGTGTCTCACTATGTAACCTGCTGAGTGCATTGATCAGCCCTGCAAAGGCCATAGCCGCAGCCAAATCAGGTGGAGTAATACTAAATGGTGAAGGAACAGACACAAATACTCAGGATTTCTTGGCAAATAAAGGTTTAACATCTATTAAGAAGGACATGACTGACATAAGCCACAGTTACGAAGACCTGGGCCTCTTACTCAAGGATAAAATAGTTGAACTGAACACTAAGCTCTCCAAATTGCAAAAGGCTCAGGAAGAGTCCAGTGCAATGATGCAGTGGTTAGAGAAGATGAACAAGACGGCCAGCAGGTGGCGCCAGACACCTACACCTGCAGACACTGAGTCTGTGAAGTTGCAGGTGGAGCAGAACAAGTCATTTGAGGCAGAACTGAAGCAAAATGTAAACAAAGTGCAAGAATTAAAAGACAAACTATCAGAGCTTCTGGAAGAGAACCCAGAGGCTCCCGAGGCCCAGTCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAGTCCTCCAATAATCTAACCCAGTTCCAGACCACAGAGGCCCAGTTAAAACAGTGGCTCATGGAGAAGGAGCTGATGGTCAGCGTGCTCGGCCCCTTGTCCATTGACCCAAACATGTTGAACACACAGAAGCAGCAGGTCCAGATTCTGCTGCAAGAGTTCGACACCCGGAAACCTCAGTATGAACAGCTCACAGCGGCTGGCCAGGGCATTCTGAGCAGGCCTGGGGAAGACCCTTCTTTACATGGGATTGTGAACGAGCAACTGGAAGCTGTGACCCAGAAGTGGGACAACCTAACAGGACAACTGAGGGACAGATGCGACTGGATTGACCAGGCTATCGTCAAAAGCACACAGTACCAGAGCCTGCTGAGAAGTCTCTCGGGTACCCTGACTGAGCTGGATGACAAGCTCAGCAGCGGCCTCACCTCAGGCGCACTGCCAGATGCCGTGAACCAACAACTGGAGGCAGCCCAGAGGCTGAAGCAGGAAATCGAGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGGTCTGTGAGGACCTGTCGGCACTGGTCAAAGAGGAGTACTTGAAAGCAGAACTGAGCAGACAACTAGAAGGCATCTTAAAGTCGTTTAAGGATATTGAGCAAAAGACAGAGAATCATGTTCAGCACCTCCAGTCAGCCTGTGCGAGCTCACACCAGTTTCAGCAAATGTCTAAGGATTTCCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGAGGGACTCTCCCCCGATTTCCGCAAAGCTGGATGTCTTGGAGTCGTTACTTAACTCGCAGAAAGACTTTGGCAAAACTTTCACTGAGCAGTCTAACATTTACGAGAAAACCATTTCAGAAGGCGAAAACCTGTTATTGAAGACACAGGGGGCAGAGAAGGCAGCTCTACAGTTGCAGCTGAACACCATGAAAACAGACTGGGACCGATTTAGAAAACAGGTGAAAGAAAGGGAAGAGAAATTGAAAGACTCGTTGGAAAAAGCCCTCAAGTACAGAGAGCAAGTGGAGACTCTGCGGCCGTGGATAGACAGATGTCAGCACAGCCTGGACGGCGTGACGTTCTCCCTGGATCCCACTGAATCAGAGAGTTCCATCGCCGAGTTAAAGTCCCTGCAGAAGGAAATGGACCACCACTTTGGTATGCTGGAACTACTGAACAACACAGCCAATAGCCTGCTCAGCGTCTGCGAGGTAGATAAAGAAGCGGTCACGGAGGAGAATCAGTCATTGATGGAAAAGGTAAACAGGGTCACTGAGCAGCTCCAAAGTAAGACAGTCTCCCTGGAGAACATGGCCCAGAAGTTTAAAGAATTTCAGGAAGTCTCCAGAGACACCCAAAGGCAGCTTCAGGATACAAAAGAACAGCTAGAGGTCCATCACTCCCTAGGACCCCAGGCGTACAGTAACAAGCACCTGTCCGTGCTGCAGGCTCAACAGAAGTCACTGCAGACCCTGAAACAGCAGGTAGACGAGGCAAAAAGGCTTGCTCAGGACCTCGTGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGATGTGTTGTTGCAAGCGGAGACGTTAGCTGAAGAGCACAGCGAACTGAGCCAACAGGTGGACGAGAAGTGTTCTTTCTTAGAAACCAAGCTCCAGGGTCTCGGCCACTTCCAGAATACCATCCGAGAGATGTTCTCTCAGTTTACAGAGTGTGATGATGAGCTGGACGGCATGGCCCCGGTGGGGAGAGATGCAGAAACCCTGAGAAAGCAAAAGGCGTGCATGCAGACCTTTTTGAAGAAACTGGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAGAACCTGCAAGATGATGCTGGCCACCGAGGAGACCTCTCCTGACCTCATCGGAGTCAAGAGGGACTTAGAAGCCTTGAGCAAGCAGTGCAACAAGCTGCTGGACCGGGCGAAAACCAGGGAGGAGCAGGTGGATGGAGCCACCGAGAAGCTGGAAGAGTTCCACCGTAAGCTGGAGGAGTTCTCCACTCTGCTCCAGAAGGCTGAAGAACACGAAGAGTCCCAGGGCCCCGTAGGTACAGAAACCGAGACAATCAACCAGCAGCTTGATGTGTTTAAG
Divergent primers for circular RNA PCR
Primer Set-1
Forward primer
Tm
Reverse primer
Tm
Product size
GAACACGAAGAGTCCCAGGG
60.04
TAGGCGGTTTTCAGTCTGGG
59.68
153
Primer Set-2
Forward primer
Tm
Reverse primer
Tm
Product size
GAACACGAAGAGTCCCAGGG
60.04
GCGGTTTTCAGTCTGGGTGA
60.53
150
PCR template sequence:
GTTCTCCACTCTGCTCCAGAAGGCTGAAGAACACGAAGAGTCCCAGGGCCCCGTAGGTACAGAAACCGAGACAATCAACCAGCAGCTTGATGTGTTTAAGGTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGGCTGTGTGATCTCCTCACCCAGACTGAAAACCGCCTAATTAGTAACCAGGAAGCCT
Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs
43
Interacting miRNAs (#binding sites)
mmu-miR-326-3p(3), mmu-miR-24-3p(2), mmu-miR-207(2), mmu-miR-673-5p(2), mmu-miR-1904(2), mmu-miR-338-3p(2), mmu-miR-141-3p(1), mmu-miR-199a-5p(1), mmu-miR-200b-3p(1), mmu-miR-34c-5p(1), mmu-miR-223-3p(1), mmu-miR-34a-5p(1), mmu-miR-200c-3p(1), mmu-miR-26a-5p(1), mmu-miR-92a-3p(1), mmu-miR-211-5p(1), mmu-miR-19a-3p(1), mmu-miR-217-5p(1), mmu-miR-25-3p(1), mmu-miR-138-5p(1), mmu-miR-185-5p(1), mmu-miR-10a-5p(1), mmu-miR-214-3p(1), mmu-miR-149-5p(1), mmu-miR-136-5p(1), mmu-miR-351-5p(1), mmu-miR-363-3p(1), mmu-miR-22-3p(1), mmu-miR-199b-3p(1), mmu-miR-218-5p(1), mmu-miR-199a-3p(1), mmu-miR-370-3p(1), mmu-miR-362-5p(1), mmu-miR-34b-5p(1), mmu-miR-1198-5p(1), mmu-miR-5101(1), mmu-miR-539-5p(1), mmu-miR-335-3p(1), mmu-miR-3470b(1), mmu-miR-540-3p(1), mmu-miR-697(1), mmu-miR-99a-5p(1), mmu-miR-339-3p(1)
siRNAs for circular RNA silencing
Junction sequence
TGATGTGTTTAAGGTTGTGGCAGAGC
siRNA sets
TCTGCCACAACCTTAAACA, CTGCCACAACCTTAAACAC
Protein-coding potential of circular RNAs
CPAT analysis
CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length
CIRCDST_5082_ORF_1
1.2202
0.379079065
1
9996
ORF sequence:
ATGCAAGGAAGTACACAGGCAATGGAAGAAATAGTGCGAAACACAGAACTCTTTTTAAAAGAGAGCGGTGACGAGTTGTCCCAAGCGGATAGAGCTTTGATTGAGCAGAAACTGAACGAGGTGAAGATGAAGTGTGCGCAGCTGAACTTAAAGGCTGAGCAGTCGAGAAAGGAGTTGGATAAGGCAGTGACTACGGCCCTCAAGGAGGAGACTGAAAAGGTTGCAGCTGTGAGGCAGCTGGAAGAGAGCAAAACCAAGATAGAAAATCTTTTGAACTGGCTGTCAAATGTTGAGGAAGACTCCGAAGGGGTGTGGACGAAGCACACACAACCCATGGAGCAGAACGGAACCTATTTGCATGAAGGTGATAGCAAGTTAGGAGCTGGCGAAGAGGATGAAGTCAATGGTAACCTGCTGGAGACAGATGCTGAAGGGCACAGTGAGGCCACGAAGGGGAATCTGAACCAGCAGTATGAGAAAGTCAAGGCCCAGCACGGAAAGATCATGGCTCAGCACCAGGCGGTCCTCCTAGCCACGCAGTCGGCCCAGGTGCTGCTTGAGAAACAGGGCCACTATCTGTCCCCCGAGGAGAAGGAGAAGCTGCAGAAGAACACGCAGGAGCTGAAGGTGCATTACGAGAAGGTGCTGGCCGAGTGCGAGAAGAAGGTGAAGCTGACGCACTCCCTGCAGGAGGAGCTGGAGAAGTTTGACACCGACTACAGCGAGTTTGAGCACTGGCTACAGCAGTCCGAGCAAGAACTGGCGAACCTGGAGGCAGGTGCGGACGACCTCAGCGGGCTCATGGACAAGCTGACGAGGCAGAAGAGCTTCTCAGAGGACGTCATTTCTCACAAAGGCGACTTGAGGTACATCACCATTTCCGGAAACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAGAGACAGTGACAGGATCGGCAAGGACAGCGTCGAGACTTCCGCAACCCACAGAGAAGTTCAGACCAAACTGGACCAGGTTACAGACCGCTTCAGGTCTCTCTACTCTAAGTGCAGTGTTCTTGGAAATAACCTCAAAGACCTGGTGGATCAATACCAGCAGTATGAAGATGCTTCCTGCGGCCTTCTCTCCGGGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCCCATTGCTTTGGACCCCAAAAATCTGCAAAGGCAGCTGGAAGAGACCAAGGCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGAGAAGCTGAAGAAAACCGCAGAGGTACTCTTGGATGCCAAGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGAAGACGCTTGATGACATTGTCGGGAGATACGATGATCTGTCCAAGTGTGTGAACGAACGGAATGAAAAGCTCCAGATCACTCTGACCCGCTCCCTGAGTGTGCAGGACGCTTTGGATGAGATGCTGGACTGGATGGGAAGTGTGGAAAGCTCCCTGGTCAAGCCAGGTCAAGTGCCACTAAACTCCACAGCGCTCCAGGATCTCATCAGTAAAGACACCATGCTGGAGCAGGATATTACGGGTCGTCAAAGCAGCATAAATGCCATGAACGAAAAGGTGAAGACATTTATAGAGACGACAGACCCGTCCACAGCCTCCTCCCTGCAAGCGAAAATGAAGGATCTGTCTGCTCGCTTTTCCGAAGCAAGTCAGAAACACAAGGAAAAGCTAGCCAAGATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTCAGACAAGCTCCAGACGTTTCTAGAGACACAGAGCCAGGCGCTCACCGAGGTGGCCATGCCAGGAAAGGATGTTCCGGAGCTGTCTCAGCATATGCAGGAATCAACTGCTAAATTCTTAGAACACAGGAAAGATCTCGAAGCTTTGCACAGCCTCCTGAAAGAGATATCCAGCCATGGCTTACCAGGGGACAAAGCTCTGGTGTTTGAGAAAACTAATAACTTGTCAAGGAAATTCAAAGAAATGGAGGATACTATCCAAGAAAAGAAAGACGCTCTAAGTTCTTGTCAGGAGCAGCTGAGTGCTTTTCAAACCCTCGCTCAGTCACTGAAAACATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTGTGAAGCCTTCTCTTGGCACAGAGGACTTGAGAAAATCTCTGGAAGAAACCAAGAAATTACAAGAAAAGTGGAATCTGAAAGCACCAGAAATTCACAAAGCAAACAACAGTGGTGTCTCACTATGTAACCTGCTGAGTGCATTGATCAGCCCTGCAAAGGCCATAGCCGCAGCCAAATCAGGTGGAGTAATACTAAATGGTGAAGGAACAGACACAAATACTCAGGATTTCTTGGCAAATAAAGGTTTAACATCTATTAAGAAGGACATGACTGACATAAGCCACAGTTACGAAGACCTGGGCCTCTTACTCAAGGATAAAATAGTTGAACTGAACACTAAGCTCTCCAAATTGCAAAAGGCTCAGGAAGAGTCCAGTGCAATGATGCAGTGGTTAGAGAAGATGAACAAGACGGCCAGCAGGTGGCGCCAGACACCTACACCTGCAGACACTGAGTCTGTGAAGTTGCAGGTGGAGCAGAACAAGTCATTTGAGGCAGAACTGAAGCAAAATGTAAACAAAGTGCAAGAATTAAAAGACAAACTATCAGAGCTTCTGGAAGAGAACCCAGAGGCTCCCGAGGCCCAGTCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAGTCCTCCAATAATCTAACCCAGTTCCAGACCACAGAGGCCCAGTTAAAACAGTGGCTCATGGAGAAGGAGCTGATGGTCAGCGTGCTCGGCCCCTTGTCCATTGACCCAAACATGTTGAACACACAGAAGCAGCAGGTCCAGATTCTGCTGCAAGAGTTCGACACCCGGAAACCTCAGTATGAACAGCTCACAGCGGCTGGCCAGGGCATTCTGAGCAGGCCTGGGGAAGACCCTTCTTTACATGGGATTGTGAACGAGCAACTGGAAGCTGTGACCCAGAAGTGGGACAACCTAACAGGACAACTGAGGGACAGATGCGACTGGATTGACCAGGCTATCGTCAAAAGCACACAGTACCAGAGCCTGCTGAGAAGTCTCTCGGGTACCCTGACTGAGCTGGATGACAAGCTCAGCAGCGGCCTCACCTCAGGCGCACTGCCAGATGCCGTGAACCAACAACTGGAGGCAGCCCAGAGGCTGAAGCAGGAAATCGAGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGGTCTGTGAGGACCTGTCGGCACTGGTCAAAGAGGAGTACTTGAAAGCAGAACTGAGCAGACAACTAGAAGGCATCTTAAAGTCGTTTAAGGATATTGAGCAAAAGACAGAGAATCATGTTCAGCACCTCCAGTCAGCCTGTGCGAGCTCACACCAGTTTCAGCAAATGTCTAAGGATTTCCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGAGGGACTCTCCCCCGATTTCCGCAAAGCTGGATGTCTTGGAGTCGTTACTTAACTCGCAGAAAGACTTTGGCAAAACTTTCACTGAGCAGTCTAACATTTACGAGAAAACCATTTCAGAAGGCGAAAACCTGTTATTGAAGACACAGGGGGCAGAGAAGGCAGCTCTACAGTTGCAGCTGAACACCATGAAAACAGACTGGGACCGATTTAGAAAACAGGTGAAAGAAAGGGAAGAGAAATTGAAAGACTCGTTGGAAAAAGCCCTCAAGTACAGAGAGCAAGTGGAGACTCTGCGGCCGTGGATAGACAGATGTCAGCACAGCCTGGACGGCGTGACGTTCTCCCTGGATCCCACTGAATCAGAGAGTTCCATCGCCGAGTTAAAGTCCCTGCAGAAGGAAATGGACCACCACTTTGGTATGCTGGAACTACTGAACAACACAGCCAATAGCCTGCTCAGCGTCTGCGAGGTAGATAAAGAAGCGGTCACGGAGGAGAATCAGTCATTGATGGAAAAGGTAAACAGGGTCACTGAGCAGCTCCAAAGTAAGACAGTCTCCCTGGAGAACATGGCCCAGAAGTTTAAAGAATTTCAGGAAGTCTCCAGAGACACCCAAAGGCAGCTTCAGGATACAAAAGAACAGCTAGAGGTCCATCACTCCCTAGGACCCCAGGCGTACAGTAACAAGCACCTGTCCGTGCTGCAGGCTCAACAGAAGTCACTGCAGACCCTGAAACAGCAGGTAGACGAGGCAAAAAGGCTTGCTCAGGACCTCGTGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGATGTGTTGTTGCAAGCGGAGACGTTAGCTGAAGAGCACAGCGAACTGAGCCAACAGGTGGACGAGAAGTGTTCTTTCTTAGAAACCAAGCTCCAGGGTCTCGGCCACTTCCAGAATACCATCCGAGAGATGTTCTCTCAGTTTACAGAGTGTGATGATGAGCTGGACGGCATGGCCCCGGTGGGGAGAGATGCAGAAACCCTGAGAAAGCAAAAGGCGTGCATGCAGACCTTTTTGAAGAAACTGGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAGAACCTGCAAGATGATGCTGGCCACCGAGGAGACCTCTCCTGACCTCATCGGAGTCAAGAGGGACTTAGAAGCCTTGAGCAAGCAGTGCAACAAGCTGCTGGACCGGGCGAAAACCAGGGAGGAGCAGGTGGATGGAGCCACCGAGAAGCTGGAAGAGTTCCACCGTAAGCTGGAGGAGTTCTCCACTCTGCTCCAGAAGGCTGAAGAACACGAAGAGTCCCAGGGCCCCGTAGGTACAGAAACCGAGACAATCAACCAGCAGCTTGATGTGTTTAAGGTTGTGGCAGAGCGTCAGCAAGAGTACAGAGAGAAACTCCAAGGGCTGTGTGATCTCCTCACCCAGACTGAAAACCGCCTAATTAGTAACCAGGAAGCCTTTGTGATTGGAGACGGCACGGTGGAGTTACAGAAGTACCAGTCCAAGCAAGAGGAATTACAGAGAGATATGCAAGGAAGTACACAGGCAATGGAAGAAATAGTGCGAAACACAGAACTCTTTTTAAAAGAGAGCGGTGACGAGTTGTCCCAAGCGGATAGAGCTTTGATTGAGCAGAAACTGAACGAGGTGAAGATGAAGTGTGCGCAGCTGAACTTAAAGGCTGAGCAGTCGAGAAAGGAGTTGGATAAGGCAGTGACTACGGCCCTCAAGGAGGAGACTGAAAAGGTTGCAGCTGTGAGGCAGCTGGAAGAGAGCAAAACCAAGATAGAAAATCTTTTGAACTGGCTGTCAAATGTTGAGGAAGACTCCGAAGGGGTGTGGACGAAGCACACACAACCCATGGAGCAGAACGGAACCTATTTGCATGAAGGTGATAGCAAGTTAGGAGCTGGCGAAGAGGATGAAGTCAATGGTAACCTGCTGGAGACAGATGCTGAAGGGCACAGTGAGGCCACGAAGGGGAATCTGAACCAGCAGTATGAGAAAGTCAAGGCCCAGCACGGAAAGATCATGGCTCAGCACCAGGCGGTCCTCCTAGCCACGCAGTCGGCCCAGGTGCTGCTTGAGAAACAGGGCCACTATCTGTCCCCCGAGGAGAAGGAGAAGCTGCAGAAGAACACGCAGGAGCTGAAGGTGCATTACGAGAAGGTGCTGGCCGAGTGCGAGAAGAAGGTGAAGCTGACGCACTCCCTGCAGGAGGAGCTGGAGAAGTTTGACACCGACTACAGCGAGTTTGAGCACTGGCTACAGCAGTCCGAGCAAGAACTGGCGAACCTGGAGGCAGGTGCGGACGACCTCAGCGGGCTCATGGACAAGCTGACGAGGCAGAAGAGCTTCTCAGAGGACGTCATTTCTCACAAAGGCGACTTGAGGTACATCACCATTTCCGGAAACAGGGTGATAGACGCTGCCAAGTCTTGCAGCAAGAGAGACAGTGACAGGATCGGCAAGGACAGCGTCGAGACTTCCGCAACCCACAGAGAAGTTCAGACCAAACTGGACCAGGTTACAGACCGCTTCAGGTCTCTCTACTCTAAGTGCAGTGTTCTTGGAAATAACCTCAAAGACCTGGTGGATCAATACCAGCAGTATGAAGATGCTTCCTGCGGCCTTCTCTCCGGGCTCCAGGCCTGCGAGGCCAAAGCCAGCAAACATTTACGGGAGCCCATTGCTTTGGACCCCAAAAATCTGCAAAGGCAGCTGGAAGAGACCAAGGCTTTGCAAGGACAGATATCAAGTCAGCAGGTTGCTGTAGAGAAGCTGAAGAAAACCGCAGAGGTACTCTTGGATGCCAAGGGCTCGCTGCTTCCTGCCAAGAATGACATCCAGAAGACGCTTGATGACATTGTCGGGAGATACGATGATCTGTCCAAGTGTGTGAACGAACGGAATGAAAAGCTCCAGATCACTCTGACCCGCTCCCTGAGTGTGCAGGACGCTTTGGATGAGATGCTGGACTGGATGGGAAGTGTGGAAAGCTCCCTGGTCAAGCCAGGTCAAGTGCCACTAAACTCCACAGCGCTCCAGGATCTCATCAGTAAAGACACCATGCTGGAGCAGGATATTACGGGTCGTCAAAGCAGCATAAATGCCATGAACGAAAAGGTGAAGACATTTATAGAGACGACAGACCCGTCCACAGCCTCCTCCCTGCAAGCGAAAATGAAGGATCTGTCTGCTCGCTTTTCCGAAGCAAGTCAGAAACACAAGGAAAAGCTAGCCAAGATGGTGGAGCTAAAGGCCAAAGTAGAGCAGTTTGAGAAGCTCTCAGACAAGCTCCAGACGTTTCTAGAGACACAGAGCCAGGCGCTCACCGAGGTGGCCATGCCAGGAAAGGATGTTCCGGAGCTGTCTCAGCATATGCAGGAATCAACTGCTAAATTCTTAGAACACAGGAAAGATCTCGAAGCTTTGCACAGCCTCCTGAAAGAGATATCCAGCCATGGCTTACCAGGGGACAAAGCTCTGGTGTTTGAGAAAACTAATAACTTGTCAAGGAAATTCAAAGAAATGGAGGATACTATCCAAGAAAAGAAAGACGCTCTAAGTTCTTGTCAGGAGCAGCTGAGTGCTTTTCAAACCCTCGCTCAGTCACTGAAAACATGGATAAAAGAGACAACCAAGCAGGTTCCCGTTGTGAAGCCTTCTCTTGGCACAGAGGACTTGAGAAAATCTCTGGAAGAAACCAAGAAATTACAAGAAAAGTGGAATCTGAAAGCACCAGAAATTCACAAAGCAAACAACAGTGGTGTCTCACTATGTAACCTGCTGAGTGCATTGATCAGCCCTGCAAAGGCCATAGCCGCAGCCAAATCAGGTGGAGTAATACTAAATGGTGAAGGAACAGACACAAATACTCAGGATTTCTTGGCAAATAAAGGTTTAACATCTATTAAGAAGGACATGACTGACATAAGCCACAGTTACGAAGACCTGGGCCTCTTACTCAAGGATAAAATAGTTGAACTGAACACTAAGCTCTCCAAATTGCAAAAGGCTCAGGAAGAGTCCAGTGCAATGATGCAGTGGTTAGAGAAGATGAACAAGACGGCCAGCAGGTGGCGCCAGACACCTACACCTGCAGACACTGAGTCTGTGAAGTTGCAGGTGGAGCAGAACAAGTCATTTGAGGCAGAACTGAAGCAAAATGTAAACAAAGTGCAAGAATTAAAAGACAAACTATCAGAGCTTCTGGAAGAGAACCCAGAGGCTCCCGAGGCCCAGTCCTGGAAGCAGGCACTGGCAGAGATGGACACTAAGTGGCAAGAGCTCAACCAGTTGACCATGGACAGGCAACAAAAGCTGGAAGAGTCCTCCAATAATCTAACCCAGTTCCAGACCACAGAGGCCCAGTTAAAACAGTGGCTCATGGAGAAGGAGCTGATGGTCAGCGTGCTCGGCCCCTTGTCCATTGACCCAAACATGTTGAACACACAGAAGCAGCAGGTCCAGATTCTGCTGCAAGAGTTCGACACCCGGAAACCTCAGTATGAACAGCTCACAGCGGCTGGCCAGGGCATTCTGAGCAGGCCTGGGGAAGACCCTTCTTTACATGGGATTGTGAACGAGCAACTGGAAGCTGTGACCCAGAAGTGGGACAACCTAACAGGACAACTGAGGGACAGATGCGACTGGATTGACCAGGCTATCGTCAAAAGCACACAGTACCAGAGCCTGCTGAGAAGTCTCTCGGGTACCCTGACTGAGCTGGATGACAAGCTCAGCAGCGGCCTCACCTCAGGCGCACTGCCAGATGCCGTGAACCAACAACTGGAGGCAGCCCAGAGGCTGAAGCAGGAAATCGAGCAGCAGGCACCGAAGATCAAGGAGGCCCAGGAGGTCTGTGAGGACCTGTCGGCACTGGTCAAAGAGGAGTACTTGAAAGCAGAACTGAGCAGACAACTAGAAGGCATCTTAAAGTCGTTTAAGGATATTGAGCAAAAGACAGAGAATCATGTTCAGCACCTCCAGTCAGCCTGTGCGAGCTCACACCAGTTTCAGCAAATGTCTAAGGATTTCCAAGCATGGCTTGACGCCAAGAAAGAAGAGCAGAGGGACTCTCCCCCGATTTCCGCAAAGCTGGATGTCTTGGAGTCGTTACTTAACTCGCAGAAAGACTTTGGCAAAACTTTCACTGAGCAGTCTAACATTTACGAGAAAACCATTTCAGAAGGCGAAAACCTGTTATTGAAGACACAGGGGGCAGAGAAGGCAGCTCTACAGTTGCAGCTGAACACCATGAAAACAGACTGGGACCGATTTAGAAAACAGGTGAAAGAAAGGGAAGAGAAATTGAAAGACTCGTTGGAAAAAGCCCTCAAGTACAGAGAGCAAGTGGAGACTCTGCGGCCGTGGATAGACAGATGTCAGCACAGCCTGGACGGCGTGACGTTCTCCCTGGATCCCACTGAATCAGAGAGTTCCATCGCCGAGTTAAAGTCCCTGCAGAAGGAAATGGACCACCACTTTGGTATGCTGGAACTACTGAACAACACAGCCAATAGCCTGCTCAGCGTCTGCGAGGTAGATAAAGAAGCGGTCACGGAGGAGAATCAGTCATTGATGGAAAAGGTAAACAGGGTCACTGAGCAGCTCCAAAGTAAGACAGTCTCCCTGGAGAACATGGCCCAGAAGTTTAAAGAATTTCAGGAAGTCTCCAGAGACACCCAAAGGCAGCTTCAGGATACAAAAGAACAGCTAGAGGTCCATCACTCCCTAGGACCCCAGGCGTACAGTAACAAGCACCTGTCCGTGCTGCAGGCTCAACAGAAGTCACTGCAGACCCTGAAACAGCAGGTAGACGAGGCAAAAAGGCTTGCTCAGGACCTCGTGGTAGAAGCCGCAGACTCAAAGGGAACCTCTGATGTGTTGTTGCAAGCGGAGACGTTAGCTGAAGAGCACAGCGAACTGAGCCAACAGGTGGACGAGAAGTGTTCTTTCTTAGAAACCAAGCTCCAGGGTCTCGGCCACTTCCAGAATACCATCCGAGAGATGTTCTCTCAGTTTACAGAGTGTGATGATGAGCTGGACGGCATGGCCCCGGTGGGGAGAGATGCAGAAACCCTGAGAAAGCAAAAGGCGTGCATGCAGACCTTTTTGAAGAAACTGGAAGCCCTCATGGCGAGCAACGACAGCGCCAACAGAACCTGCAAGATGATGCTGGCCACCGAGGAGACCTCTCCTGACCTCATCGGAGTCAAGAGGGACTTAGAAGCCTTGAGCAAGCAGTGCAACAAGCTGCTGGACCGGGCGAAAACCAGGGAGGAGCAGGTGGATGGAGCCACCGAGAAGCTGGAAGAGTTCCACCGTAAGCTGGAGGAGTTCTCCACTCTGCTCCAGAAGGCTGAAGAACACGAAGAGTCCCAGGGCCCCGTAGGTACAGAAACCGAGACAATCAACCAGCAGCTTGATGTGTTTAAG
Peptide sequence:
MQGSTQAMEEIVRNTELFLKESGDELSQADRALIEQKLNEVKMKCAQLNLKAEQSRKELDKAVTTALKEETEKVAAVRQLEESKTKIENLLNWLSNVEEDSEGVWTKHTQPMEQNGTYLHEGDSKLGAGEEDEVNGNLLETDAEGHSEATKGNLNQQYEKVKAQHGKIMAQHQAVLLATQSAQVLLEKQGHYLSPEEKEKLQKNTQELKVHYEKVLAECEKKVKLTHSLQEELEKFDTDYSEFEHWLQQSEQELANLEAGADDLSGLMDKLTRQKSFSEDVISHKGDLRYITISGNRVIDAAKSCSKRDSDRIGKDSVETSATHREVQTKLDQVTDRFRSLYSKCSVLGNNLKDLVDQYQQYEDASCGLLSGLQACEAKASKHLREPIALDPKNLQRQLEETKALQGQISSQQVAVEKLKKTAEVLLDAKGSLLPAKNDIQKTLDDIVGRYDDLSKCVNERNEKLQITLTRSLSVQDALDEMLDWMGSVESSLVKPGQVPLNSTALQDLISKDTMLEQDITGRQSSINAMNEKVKTFIETTDPSTASSLQAKMKDLSARFSEASQKHKEKLAKMVELKAKVEQFEKLSDKLQTFLETQSQALTEVAMPGKDVPELSQHMQESTAKFLEHRKDLEALHSLLKEISSHGLPGDKALVFEKTNNLSRKFKEMEDTIQEKKDALSSCQEQLSAFQTLAQSLKTWIKETTKQVPVVKPSLGTEDLRKSLEETKKLQEKWNLKAPEIHKANNSGVSLCNLLSALISPAKAIAAAKSGGVILNGEGTDTNTQDFLANKGLTSIKKDMTDISHSYEDLGLLLKDKIVELNTKLSKLQKAQEESSAMMQWLEKMNKTASRWRQTPTPADTESVKLQVEQNKSFEAELKQNVNKVQELKDKLSELLEENPEAPEAQSWKQALAEMDTKWQELNQLTMDRQQKLEESSNNLTQFQTTEAQLKQWLMEKELMVSVLGPLSIDPNMLNTQKQQVQILLQEFDTRKPQYEQLTAAGQGILSRPGEDPSLHGIVNEQLEAVTQKWDNLTGQLRDRCDWIDQAIVKSTQYQSLLRSLSGTLTELDDKLSSGLTSGALPDAVNQQLEAAQRLKQEIEQQAPKIKEAQEVCEDLSALVKEEYLKAELSRQLEGILKSFKDIEQKTENHVQHLQSACASSHQFQQMSKDFQAWLDAKKEEQRDSPPISAKLDVLESLLNSQKDFGKTFTEQSNIYEKTISEGENLLLKTQGAEKAALQLQLNTMKTDWDRFRKQVKEREEKLKDSLEKALKYREQVETLRPWIDRCQHSLDGVTFSLDPTESESSIAELKSLQKEMDHHFGMLELLNNTANSLLSVCEVDKEAVTEENQSLMEKVNRVTEQLQSKTVSLENMAQKFKEFQEVSRDTQRQLQDTKEQLEVHHSLGPQAYSNKHLSVLQAQQKSLQTLKQQVDEAKRLAQDLVVEAADSKGTSDVLLQAETLAEEHSELSQQVDEKCSFLETKLQGLGHFQNTIREMFSQFTECDDELDGMAPVGRDAETLRKQKACMQTFLKKLEALMASNDSANRTCKMMLATEETSPDLIGVKRDLEALSKQCNKLLDRAKTREEQVDGATEKLEEFHRKLEEFSTLLQKAEEHEESQGPVGTETETINQQLDVFKVVAERQQEYREKLQGLCDLLTQTENRLISNQEAFVIGDGTVELQKYQSKQEELQRDMQGSTQAMEEIVRNTELFLKESGDELSQADRALIEQKLNEVKMKCAQLNLKAEQSRKELDKAVTTALKEETEKVAAVRQLEESKTKIENLLNWLSNVEEDSEGVWTKHTQPMEQNGTYLHEGDSKLGAGEEDEVNGNLLETDAEGHSEATKGNLNQQYEKVKAQHGKIMAQHQAVLLATQSAQVLLEKQGHYLSPEEKEKLQKNTQELKVHYEKVLAECEKKVKLTHSLQEELEKFDTDYSEFEHWLQQSEQELANLEAGADDLSGLMDKLTRQKSFSEDVISHKGDLRYITISGNRVIDAAKSCSKRDSDRIGKDSVETSATHREVQTKLDQVTDRFRSLYSKCSVLGNNLKDLVDQYQQYEDASCGLLSGLQACEAKASKHLREPIALDPKNLQRQLEETKALQGQISSQQVAVEKLKKTAEVLLDAKGSLLPAKNDIQKTLDDIVGRYDDLSKCVNERNEKLQITLTRSLSVQDALDEMLDWMGSVESSLVKPGQVPLNSTALQDLISKDTMLEQDITGRQSSINAMNEKVKTFIETTDPSTASSLQAKMKDLSARFSEASQKHKEKLAKMVELKAKVEQFEKLSDKLQTFLETQSQALTEVAMPGKDVPELSQHMQESTAKFLEHRKDLEALHSLLKEISSHGLPGDKALVFEKTNNLSRKFKEMEDTIQEKKDALSSCQEQLSAFQTLAQSLKTWIKETTKQVPVVKPSLGTEDLRKSLEETKKLQEKWNLKAPEIHKANNSGVSLCNLLSALISPAKAIAAAKSGGVILNGEGTDTNTQDFLANKGLTSIKKDMTDISHSYEDLGLLLKDKIVELNTKLSKLQKAQEESSAMMQWLEKMNKTASRWRQTPTPADTESVKLQVEQNKSFEAELKQNVNKVQELKDKLSELLEENPEAPEAQSWKQALAEMDTKWQELNQLTMDRQQKLEESSNNLTQFQTTEAQLKQWLMEKELMVSVLGPLSIDPNMLNTQKQQVQILLQEFDTRKPQYEQLTAAGQGILSRPGEDPSLHGIVNEQLEAVTQKWDNLTGQLRDRCDWIDQAIVKSTQYQSLLRSLSGTLTELDDKLSSGLTSGALPDAVNQQLEAAQRLKQEIEQQAPKIKEAQEVCEDLSALVKEEYLKAELSRQLEGILKSFKDIEQKTENHVQHLQSACASSHQFQQMSKDFQAWLDAKKEEQRDSPPISAKLDVLESLLNSQKDFGKTFTEQSNIYEKTISEGENLLLKTQGAEKAALQLQLNTMKTDWDRFRKQVKEREEKLKDSLEKALKYREQVETLRPWIDRCQHSLDGVTFSLDPTESESSIAELKSLQKEMDHHFGMLELLNNTANSLLSVCEVDKEAVTEENQSLMEKVNRVTEQLQSKTVSLENMAQKFKEFQEVSRDTQRQLQDTKEQLEVHHSLGPQAYSNKHLSVLQAQQKSLQTLKQQVDEAKRLAQDLVVEAADSKGTSDVLLQAETLAEEHSELSQQVDEKCSFLETKLQGLGHFQNTIREMFSQFTECDDELDGMAPVGRDAETLRKQKACMQTFLKKLEALMASNDSANRTCKMMLATEETSPDLIGVKRDLEALSKQCNKLLDRAKTREEQVDGATEKLEEFHRKLEEFSTLLQKAEEHEESQGPVGTETETINQQLDVFK
IRESfinder result
IRESfinder score
0.372151783
IRES/non IRES
non-IRES
riboCIRC information
riboCIRC ID
NA
NA
Evidence
Peptide sequence:
NA
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