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mmu_circAsh1l_5177

Basic information of circular RNA
PanCircBase ID:

mmu_circAsh1l_5177

mm39_Chr. Position ID:

chr3|88873118|88909181|+

Gene name:

Ash1l

Transcript:

ENSMUST00000186583.7

CircRNA type:

Exonic circular (circ)RNA

Exon/Intron count:

3

Exon/intron indexes:

2,3,4

Exon/intron offsets:

0,15421,35961

Genomic length:

36063

Exon/intron sizes in nt:

5,17,45,58,102

Flanking exon/introns:

chr3:88858302-88873118|chr3:88909181-88914448

Splice length:

5177

Other database IDs:

CIRCpedia: MMU_CIRCpedia_33252, circAtlas: mmu-Ash1l_0014

circBase: hsa_circ_0014589, circAtlas: hsa-ASH1L_0009, CIRCpedia: HSA_CIRCpedia_179937

Human Ortholog IDs:
Mature spliced Sequence:

GGAAAGAGATGCTGGTTGCAAGTTTTGGAAAACCCTATTTTTTTATGGAACAGTGTTCTGTAAAAGTTTTGTAAGATCCCTTGGCAATAACACACTTGTGATGGACCCTAGGAATACTGCTATGTTAGGATTGGGTTCTGATTCCGAAGGATTTTCAAGAAAGAGTCCTTCTACCATCAATCCTGGCACTCTGGCCAGCAAAAGAGAAGCAGAGATAGAGGGTGCCACAGAAGAAGAGGATCCTCGCAAGCGGAATCGAGAAAGGGGCACAGAAGCAGGAAAGGAGGATGGCTCGACGGATGCACAGCAACAGTTTTCAGTGAAAGAAACAAACTTTTCAGAGGGAAACTTAAAATTGAAAATTGGCCTTCAGGCAAAGAGAACTAAAAAGCCTCCAAAGAACTTGGAGAACTATGTGTGTCGACCTGCCATAAAGACAACCATCAAGCACTCAAGGAAAGCACTTAAAAGTGGGAAGATGACAGATGAGAAGAATGAGCACTGCCCTTCAAAATGGGACTCTTCAAAATTGTTCAAGAAAGCAGGTGACGCTACAGCCATCGACTGCCAAGCCGAAGAAAGCATCCATCTTCATTCACAGGGGGAAAGTAATCCTTTGTCTAAGAAGCTTTCTCCAGTACATTCACAAATGGCAGATTACATTAGTGCAGCACCATCTCTTGTTGGCAGTCGAGATCCTGATATAAAGGACAGAGCATTACTTAATGGAGGAACTAGTGTAACAGAAAAGTTGGCACAGCTCATTGCTACCTGTCCTCCTTCCAAGTCTTCCAAGGCAAAACCGAAGAAGTTAGGAACTGGCACTACAGTTGGATTGGTTAGCAAGGACTTGATCAGGAAACCAGGTGTTGGCTCTATAGCTGGAATAATTCATAAAGACTTAATTAAAAAGCCAGCTCTTAGCACAGCAGTTGGGTTGGTAACTAAAGATCCAGGGAAAAAGCCTATGTTCAATGCAGCAGTAGGCCTGATCAATAAGGACTCTGTGAAAAAATTGGGAACTGGCACTACAGCCGTATTCATTAATAAAGACTTAGGCAAAAAGCCAGGGGCTATCACTACAGTTGGACTGCTGAGCAAAGAATCAGGAAAGAAGCTAGGCATTGGTATTGTTCCAGGGCTAGTGAATAAAGAGTCTGGCAAGAAATTAGGACTTGGCACCGTAGTTGGACTGGTTAATAAAGAGTTGGGAAAGAAACTGAGTTCTACAGTTGGCCTAGTGGCCAAGGATGTTACGAAGAAGATTGTAGCAAGCTCAGCAATGGGATTGGTTAATAAGGACATTGGAAAGAAATTATTAAATTGTCCTATGGCAGGACAACTGGGCAGTAAAGATGCCTTAAACCTTAAATCTGAAGCACTGCTCCCCACTCAGGAACAACTTAAGGCTTCCTGTAGTGCAAACATAAGTAATCATGACAGTCAAGAACTTCCTGAGTCTCTGAAAGACAGTGCTACCGGCAAAGCTTTTGAGAAGAGTGTTATGCGGCATAGTAAAGAAAGCATGTTGGAAAAATTTTCAGTCCGAAAAGAAATTACTAATTTGGAGAAAGAAATGTTTAATGAAGGAACATGCATTCAGCAAGACAATTTCTCATCTAGTGAAAGGGGAGCCTTTGAAACCTCAAAACATGAAAAGCAGCCTCCTGTGTATTGCACTTCTCCTGACTTTCAAATAGGAGGTGCCTCTGATGCCTCTACAGCTAAATCTCCCTTCAGTGCAGTAGGCGAAAGCAACCTTCCTTCCTCGTCACCTACTGTATCTGTTAATCCTGTAACCAGGAGTCCCCCTGAAGCTTCTTCACAGTTGGTTCCAAACCCATTACTTTTAAATTCTACAGCAGAACAAATGGAAGAAATCTCTGAATCTATTGGAAAGAGCCAGTTTACTGCTGAAAGTACCCACTTGAATGTTGGTCACAGATCATTAGGTCATAGCTTAAGTATTGAGTGTAAAGGAATTGATAAAGAACTAAATGAATCAAAAAATACACATCTAGATATTCCTAGAATAAGTTCTTCCTTGGGAAAAAAGCCAAGTTTGACTTCTGACTCTGGTATTCATGCAATTACTCCTTCCGTTGTTAATTTTACTAGTTTGTTTAGTAACAAACCTTTTTTAAAGCTTGGTGCAGTCACTGCACCAGACAAACACTGCCAGGTTGCTGAAAGCCTAAGCTCGAGTTTCCAGTCCAAACCATTGAAAAAAAGAAAAGGAAGAAAACCTCGGTGGACTAAAGTGGTGGCAAGAAGCACATGCCGGTCTCCAAAAGGACTAGACTTAGAAAGATCAGAGCTTTTTAAGAATGTTTCTTGTAGCTCACTATCAAATAGTTCTGAGCCAGCGAAGTTTATGAAAACTATCGGAGCATCATCATTCGTCGATCATGACTTCCTTAAACGCCGATTGCCAAAGTTGAGTAAGTCTTCAGCTCCATCTCTTGCTCTTTTAACCGACAGCGAGAAACCATCTCATAAGTCTTTTATTACTCACAAACTGTCCTCCAGTATGTGTGTCACTAGCGATCTTTTGTCGGATATTTATAAGCCCAAGAGAGGAAGACCTAAATCCAAGGAAATGCCTCAGCTAGAAGGTCCACCTAAAAGGACTTTAAAAATACCTGCCTCTAAAGTTTTTTCTTTACAGTCTAAAGAAGAGCAAGAACCCCCAATTTTACAACCAGAAATTGAAATTCCTTCCTTCAAGCAAAGTTTGTCTGTATCTCCTTTTCCAAAAAAAAGAGGCAGGCCTAAGAGGCAGATGAGGTCTCCAGTGAAGATGAAACCCCCTGTCCTGTCAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCTGAAAGTGAGAACCATAGAAGTAGCAGTGACTTTTTTGAGAGTGAGGACCAGCTTCAGGACACAGACGACTTAGATGACAGTCACAGGCAAAGTGTCTGTAGTATGAGTGACCTTGAGATGGAACCAGATAAAAAAATTAGCAAGCGAAACAATGGACAATTAATGAAAACAATTATCCGAAAAATAAATAAAATGAAGACTTTAAAGAGAAAAAAACTGTTGAATCAGATTCTTTCGAGTTCTGTAGAATCAAGTAATAAAGGAAAAGTGCAGTCCAAGCTTCACAATACAGTCTCAAGTCTTGCTGCCACATTTGGCTCTAAATTGGGGCAACAAATCAATGTCAGCAAGAAAGGAACCATTTACATAGGGAAGAGAAGGGGGCGGAAACCAAAAACCGTCTTAAATGGCCTGCTTTCTGGTAGCCCTGCCAGCCTTGCTGTGCTTGAACAAACAGCTCAGCAGGCAGCTGGGTCAGCATTAGGACAGATCCTCCCCCCTTTACTGCCATCACCTGCTAGTAGCTCTGAGATCCTTCCATCACCTATTTGCTCTCAGTCTTCTGGGACTAGTGGAGGTCAGAGCCCTGTTAGTAGTGACGCAGGCTTTGTTGAACCTAGCTCAGTGCCATATTTGCATGTGCACTCCAGACAGGGCAGTATGATTCAGACTCTTGCAATGAAGAAGGCTTCCAAGGGCAGAAGGCGGCTCTCTCCTCCTACTTTGTTGCCAAATTCTCCTTCTCATTTGAGTGAACTCACATCCCTGAAAGAAGCCACTCCTTCCCCAGTTAGTGAGTCTCATAGTGACGAGACCATTCCCAGTGACAGTGGCATTGGGACAGATAATAATAGCACATCAGACAGGGCAGAGAAGTTTTGTGGACAGAAAAAGAGGAGACATTCTTTTGAGCACATTTCTCTGATTCCCCCTGAAACTTCTACCGTCCTAAACAGTCTCAAAGAAAAACACAAACACAAATGTAAGCGCAGGAGTCACGATTACCTCAGCTATGACAAGATGAAAAGACAGAAGCGAAAACGGAAAAAGAAATATCCCCAGCTTCGAAATAGGCAGGATCCAGACTTCATCGCAGAACTAGAGGAGCTGATAAGTCGTCTAAGTGAGATTCGGATCACCCATCGAAGCCATCATTTTATTCCCCGAGACCTCCTGCCAACTATTTTTCGAATCAACTTTAATAGTTTCTATACACATCCTTCTTTTCCCTTAGACCCATTGCACTACATTCGGAAACCTGACTTAAAAAAGAAACGAGGGAGGCCCCCTAAGATGAGGGAGGCAATGGCAGAAATGCCTTTTATGCACAGCCTTAGTTTTCCTTTATCTAGTACTGGATTTTATCCTTCTTATGGCATGCCTTACTCTCCCTCACCCCTTACAGCTGCTCCAATAGGATTAGGGTATTATGGAAGGTATCCCCCCACTCTTTATCCACCGCCACCATCTCCTTCATTCACCACTCCACTGCCACCTCCCTCCTATATGCATGCTGGTCATTTATTGCTCAATCCTACCAAATATCATAAGAAAAAGCATAAGCTGCTTAGACAGGAGGCTTTTCTTACAACCAGCAGGACCCCTCTCCTTTCCATGAGCACCTACCCCAGCGTACCTCCAGAGATGGCTTATGGTTGGATGGTGGAGCACAAACACAGACACCGTCACAAACACAGAGAGCACCGTTCTGAACAGCCCCAGGTTTCCATGGATAGTGGCTCTTCCAGATCCGTCTTGGAGTCTTTGAAACGTTACCGATTTGGTAAGGATACTGTTGGAGATCGATATAAGCATAAGGAAAAGCACAGGTGTCACATGTCCTGCCCTCATCTCTCTCCTTCAAAGAACTTAATAAACAGAGAAGAACAGTGGGTTTCTCGAGAGCCTTCAGAATCAAGTTCTTTAGCCTTGGGATTGCAAACACCTTTACAAATTGACTGCTCAGAAAGTTCTCCCAGTTTGTCCCTTGGAGGATTTACTCCCAATTCTGAGCCAGCCAGCAGTGATGAACATATGAACCTTTTTACAAGTGCAATAGGCAGCTGCAGAGTTTCAAACCCTAACTCCAGTTGCCGGAAGAAATTAACTGACAGCCCTGGGCTCTTTCCTGTACAAGATACTGCACTAAATCGGCCTCACAGAAAGGAACCATTACCTTCCAGTGAAAGGGCAATACAGTCGTTGGCAGGTTCCCAGTCAGCTTCCGATAAACCTTCCCAGCGATCATCAGAAAGCACAAATTGTAGCCCTACTCGTAAAAGGTCTTCATCTGAGAGTACTTCTTCAACAG

Divergent primers for circular RNA PCR

Primer Set-1

Forward primer
Tm
Reverse primer
Tm
Product size

ACCTTCCCAGCGATCATCAG

59.53

ACAAGTGTGTTATTGCCAAGGG

59.37

179

Primer Set-2

Forward primer
Tm
Reverse primer
Tm
Product size

ACCTTCCCAGCGATCATCAG

59.53

CAAGTGTGTTATTGCCAAGGGA

59.11

178

PCR template sequence:

TCCCAGTCAGCTTCCGATAAACCTTCCCAGCGATCATCAGAAAGCACAAATTGTAGCCCTACTCGTAAAAGGTCTTCATCTGAGAGTACTTCTTCAACAGGGAAAGAGATGCTGGTTGCAAGTTTTGGAAAACCCTATTTTTTTATGGAACAGTGTTCTGTAAAAGTTTTGTAAGATCCCTTGGCAATAACACACTTGTG

Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs

44

Interacting miRNAs (#binding sites)

mmu-miR-200a-3p(1), mmu-miR-141-3p(1), mmu-miR-32-5p(1), mmu-miR-7b-5p(1), mmu-miR-206-3p(1), mmu-miR-34c-5p(1), mmu-miR-34a-5p(1), mmu-miR-92a-3p(1), mmu-miR-130a-3p(1), mmu-miR-216a-5p(1), mmu-miR-101b-3p(1), mmu-miR-7a-5p(1), mmu-miR-25-3p(1), mmu-miR-181b-5p(1), mmu-miR-495-3p(1), mmu-miR-136-5p(1), mmu-miR-431-5p(1), mmu-miR-494-3p(1), mmu-miR-29b-1-5p(1), mmu-miR-22-3p(1), mmu-miR-127-5p(1), mmu-miR-182-5p(1), mmu-miR-130b-3p(1), mmu-miR-301b-3p(1), mmu-miR-721(1), mmu-miR-218-5p(1), mmu-miR-192-5p(1), mmu-miR-382-5p(1), mmu-miR-370-3p(1), mmu-miR-183-5p(1), mmu-miR-215-5p(1), mmu-miR-362-5p(1), mmu-miR-34b-5p(1), mmu-miR-301a-3p(1), mmu-miR-224-5p(1), mmu-miR-325-3p(1), mmu-miR-384-3p(1), mmu-miR-29b-2-5p(1), mmu-miR-539-5p(1), mmu-miR-335-3p(1), mmu-miR-3065-5p(1), mmu-miR-540-3p(1), mmu-miR-697(1), mmu-miR-296-3p(1)

siRNAs for circular RNA silencing
Junction sequence

ACTTCTTCAACAGGGAAAGAGATGCT

siRNA sets

CTTTCCCTGTTGAAGAAGT

Protein-coding potential of circular RNAs

CPAT analysis

CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length

CIRCASH1L_5177_ORF_1

0.7988

0.012758295

1

5151

ORF sequence:

ATGGACCCTAGGAATACTGCTATGTTAGGATTGGGTTCTGATTCCGAAGGATTTTCAAGAAAGAGTCCTTCTACCATCAATCCTGGCACTCTGGCCAGCAAAAGAGAAGCAGAGATAGAGGGTGCCACAGAAGAAGAGGATCCTCGCAAGCGGAATCGAGAAAGGGGCACAGAAGCAGGAAAGGAGGATGGCTCGACGGATGCACAGCAACAGTTTTCAGTGAAAGAAACAAACTTTTCAGAGGGAAACTTAAAATTGAAAATTGGCCTTCAGGCAAAGAGAACTAAAAAGCCTCCAAAGAACTTGGAGAACTATGTGTGTCGACCTGCCATAAAGACAACCATCAAGCACTCAAGGAAAGCACTTAAAAGTGGGAAGATGACAGATGAGAAGAATGAGCACTGCCCTTCAAAATGGGACTCTTCAAAATTGTTCAAGAAAGCAGGTGACGCTACAGCCATCGACTGCCAAGCCGAAGAAAGCATCCATCTTCATTCACAGGGGGAAAGTAATCCTTTGTCTAAGAAGCTTTCTCCAGTACATTCACAAATGGCAGATTACATTAGTGCAGCACCATCTCTTGTTGGCAGTCGAGATCCTGATATAAAGGACAGAGCATTACTTAATGGAGGAACTAGTGTAACAGAAAAGTTGGCACAGCTCATTGCTACCTGTCCTCCTTCCAAGTCTTCCAAGGCAAAACCGAAGAAGTTAGGAACTGGCACTACAGTTGGATTGGTTAGCAAGGACTTGATCAGGAAACCAGGTGTTGGCTCTATAGCTGGAATAATTCATAAAGACTTAATTAAAAAGCCAGCTCTTAGCACAGCAGTTGGGTTGGTAACTAAAGATCCAGGGAAAAAGCCTATGTTCAATGCAGCAGTAGGCCTGATCAATAAGGACTCTGTGAAAAAATTGGGAACTGGCACTACAGCCGTATTCATTAATAAAGACTTAGGCAAAAAGCCAGGGGCTATCACTACAGTTGGACTGCTGAGCAAAGAATCAGGAAAGAAGCTAGGCATTGGTATTGTTCCAGGGCTAGTGAATAAAGAGTCTGGCAAGAAATTAGGACTTGGCACCGTAGTTGGACTGGTTAATAAAGAGTTGGGAAAGAAACTGAGTTCTACAGTTGGCCTAGTGGCCAAGGATGTTACGAAGAAGATTGTAGCAAGCTCAGCAATGGGATTGGTTAATAAGGACATTGGAAAGAAATTATTAAATTGTCCTATGGCAGGACAACTGGGCAGTAAAGATGCCTTAAACCTTAAATCTGAAGCACTGCTCCCCACTCAGGAACAACTTAAGGCTTCCTGTAGTGCAAACATAAGTAATCATGACAGTCAAGAACTTCCTGAGTCTCTGAAAGACAGTGCTACCGGCAAAGCTTTTGAGAAGAGTGTTATGCGGCATAGTAAAGAAAGCATGTTGGAAAAATTTTCAGTCCGAAAAGAAATTACTAATTTGGAGAAAGAAATGTTTAATGAAGGAACATGCATTCAGCAAGACAATTTCTCATCTAGTGAAAGGGGAGCCTTTGAAACCTCAAAACATGAAAAGCAGCCTCCTGTGTATTGCACTTCTCCTGACTTTCAAATAGGAGGTGCCTCTGATGCCTCTACAGCTAAATCTCCCTTCAGTGCAGTAGGCGAAAGCAACCTTCCTTCCTCGTCACCTACTGTATCTGTTAATCCTGTAACCAGGAGTCCCCCTGAAGCTTCTTCACAGTTGGTTCCAAACCCATTACTTTTAAATTCTACAGCAGAACAAATGGAAGAAATCTCTGAATCTATTGGAAAGAGCCAGTTTACTGCTGAAAGTACCCACTTGAATGTTGGTCACAGATCATTAGGTCATAGCTTAAGTATTGAGTGTAAAGGAATTGATAAAGAACTAAATGAATCAAAAAATACACATCTAGATATTCCTAGAATAAGTTCTTCCTTGGGAAAAAAGCCAAGTTTGACTTCTGACTCTGGTATTCATGCAATTACTCCTTCCGTTGTTAATTTTACTAGTTTGTTTAGTAACAAACCTTTTTTAAAGCTTGGTGCAGTCACTGCACCAGACAAACACTGCCAGGTTGCTGAAAGCCTAAGCTCGAGTTTCCAGTCCAAACCATTGAAAAAAAGAAAAGGAAGAAAACCTCGGTGGACTAAAGTGGTGGCAAGAAGCACATGCCGGTCTCCAAAAGGACTAGACTTAGAAAGATCAGAGCTTTTTAAGAATGTTTCTTGTAGCTCACTATCAAATAGTTCTGAGCCAGCGAAGTTTATGAAAACTATCGGAGCATCATCATTCGTCGATCATGACTTCCTTAAACGCCGATTGCCAAAGTTGAGTAAGTCTTCAGCTCCATCTCTTGCTCTTTTAACCGACAGCGAGAAACCATCTCATAAGTCTTTTATTACTCACAAACTGTCCTCCAGTATGTGTGTCACTAGCGATCTTTTGTCGGATATTTATAAGCCCAAGAGAGGAAGACCTAAATCCAAGGAAATGCCTCAGCTAGAAGGTCCACCTAAAAGGACTTTAAAAATACCTGCCTCTAAAGTTTTTTCTTTACAGTCTAAAGAAGAGCAAGAACCCCCAATTTTACAACCAGAAATTGAAATTCCTTCCTTCAAGCAAAGTTTGTCTGTATCTCCTTTTCCAAAAAAAAGAGGCAGGCCTAAGAGGCAGATGAGGTCTCCAGTGAAGATGAAACCCCCTGTCCTGTCAGTGGCTCCATTTGTTGCCACTGAAAGTCCAAGTAAGCTCGAGTCTGAAAGTGAGAACCATAGAAGTAGCAGTGACTTTTTTGAGAGTGAGGACCAGCTTCAGGACACAGACGACTTAGATGACAGTCACAGGCAAAGTGTCTGTAGTATGAGTGACCTTGAGATGGAACCAGATAAAAAAATTAGCAAGCGAAACAATGGACAATTAATGAAAACAATTATCCGAAAAATAAATAAAATGAAGACTTTAAAGAGAAAAAAACTGTTGAATCAGATTCTTTCGAGTTCTGTAGAATCAAGTAATAAAGGAAAAGTGCAGTCCAAGCTTCACAATACAGTCTCAAGTCTTGCTGCCACATTTGGCTCTAAATTGGGGCAACAAATCAATGTCAGCAAGAAAGGAACCATTTACATAGGGAAGAGAAGGGGGCGGAAACCAAAAACCGTCTTAAATGGCCTGCTTTCTGGTAGCCCTGCCAGCCTTGCTGTGCTTGAACAAACAGCTCAGCAGGCAGCTGGGTCAGCATTAGGACAGATCCTCCCCCCTTTACTGCCATCACCTGCTAGTAGCTCTGAGATCCTTCCATCACCTATTTGCTCTCAGTCTTCTGGGACTAGTGGAGGTCAGAGCCCTGTTAGTAGTGACGCAGGCTTTGTTGAACCTAGCTCAGTGCCATATTTGCATGTGCACTCCAGACAGGGCAGTATGATTCAGACTCTTGCAATGAAGAAGGCTTCCAAGGGCAGAAGGCGGCTCTCTCCTCCTACTTTGTTGCCAAATTCTCCTTCTCATTTGAGTGAACTCACATCCCTGAAAGAAGCCACTCCTTCCCCAGTTAGTGAGTCTCATAGTGACGAGACCATTCCCAGTGACAGTGGCATTGGGACAGATAATAATAGCACATCAGACAGGGCAGAGAAGTTTTGTGGACAGAAAAAGAGGAGACATTCTTTTGAGCACATTTCTCTGATTCCCCCTGAAACTTCTACCGTCCTAAACAGTCTCAAAGAAAAACACAAACACAAATGTAAGCGCAGGAGTCACGATTACCTCAGCTATGACAAGATGAAAAGACAGAAGCGAAAACGGAAAAAGAAATATCCCCAGCTTCGAAATAGGCAGGATCCAGACTTCATCGCAGAACTAGAGGAGCTGATAAGTCGTCTAAGTGAGATTCGGATCACCCATCGAAGCCATCATTTTATTCCCCGAGACCTCCTGCCAACTATTTTTCGAATCAACTTTAATAGTTTCTATACACATCCTTCTTTTCCCTTAGACCCATTGCACTACATTCGGAAACCTGACTTAAAAAAGAAACGAGGGAGGCCCCCTAAGATGAGGGAGGCAATGGCAGAAATGCCTTTTATGCACAGCCTTAGTTTTCCTTTATCTAGTACTGGATTTTATCCTTCTTATGGCATGCCTTACTCTCCCTCACCCCTTACAGCTGCTCCAATAGGATTAGGGTATTATGGAAGGTATCCCCCCACTCTTTATCCACCGCCACCATCTCCTTCATTCACCACTCCACTGCCACCTCCCTCCTATATGCATGCTGGTCATTTATTGCTCAATCCTACCAAATATCATAAGAAAAAGCATAAGCTGCTTAGACAGGAGGCTTTTCTTACAACCAGCAGGACCCCTCTCCTTTCCATGAGCACCTACCCCAGCGTACCTCCAGAGATGGCTTATGGTTGGATGGTGGAGCACAAACACAGACACCGTCACAAACACAGAGAGCACCGTTCTGAACAGCCCCAGGTTTCCATGGATAGTGGCTCTTCCAGATCCGTCTTGGAGTCTTTGAAACGTTACCGATTTGGTAAGGATACTGTTGGAGATCGATATAAGCATAAGGAAAAGCACAGGTGTCACATGTCCTGCCCTCATCTCTCTCCTTCAAAGAACTTAATAAACAGAGAAGAACAGTGGGTTTCTCGAGAGCCTTCAGAATCAAGTTCTTTAGCCTTGGGATTGCAAACACCTTTACAAATTGACTGCTCAGAAAGTTCTCCCAGTTTGTCCCTTGGAGGATTTACTCCCAATTCTGAGCCAGCCAGCAGTGATGAACATATGAACCTTTTTACAAGTGCAATAGGCAGCTGCAGAGTTTCAAACCCTAACTCCAGTTGCCGGAAGAAATTAACTGACAGCCCTGGGCTCTTTCCTGTACAAGATACTGCACTAAATCGGCCTCACAGAAAGGAACCATTACCTTCCAGTGAAAGGGCAATACAGTCGTTGGCAGGTTCCCAGTCAGCTTCCGATAAACCTTCCCAGCGATCATCAGAAAGCACAAATTGTAGCCCTACTCGTAAAAGGTCTTCATCTGAGAGTACTTCTTCAACAGGGAAAGAGATGCTGGTTGCAAGTTTTGGAAAACCCTATTTTTTTATGGAACAGTGTTCTGTAAAAGTTTTGTAA

Peptide sequence:

MDPRNTAMLGLGSDSEGFSRKSPSTINPGTLASKREAEIEGATEEEDPRKRNRERGTEAGKEDGSTDAQQQFSVKETNFSEGNLKLKIGLQAKRTKKPPKNLENYVCRPAIKTTIKHSRKALKSGKMTDEKNEHCPSKWDSSKLFKKAGDATAIDCQAEESIHLHSQGESNPLSKKLSPVHSQMADYISAAPSLVGSRDPDIKDRALLNGGTSVTEKLAQLIATCPPSKSSKAKPKKLGTGTTVGLVSKDLIRKPGVGSIAGIIHKDLIKKPALSTAVGLVTKDPGKKPMFNAAVGLINKDSVKKLGTGTTAVFINKDLGKKPGAITTVGLLSKESGKKLGIGIVPGLVNKESGKKLGLGTVVGLVNKELGKKLSSTVGLVAKDVTKKIVASSAMGLVNKDIGKKLLNCPMAGQLGSKDALNLKSEALLPTQEQLKASCSANISNHDSQELPESLKDSATGKAFEKSVMRHSKESMLEKFSVRKEITNLEKEMFNEGTCIQQDNFSSSERGAFETSKHEKQPPVYCTSPDFQIGGASDASTAKSPFSAVGESNLPSSSPTVSVNPVTRSPPEASSQLVPNPLLLNSTAEQMEEISESIGKSQFTAESTHLNVGHRSLGHSLSIECKGIDKELNESKNTHLDIPRISSSLGKKPSLTSDSGIHAITPSVVNFTSLFSNKPFLKLGAVTAPDKHCQVAESLSSSFQSKPLKKRKGRKPRWTKVVARSTCRSPKGLDLERSELFKNVSCSSLSNSSEPAKFMKTIGASSFVDHDFLKRRLPKLSKSSAPSLALLTDSEKPSHKSFITHKLSSSMCVTSDLLSDIYKPKRGRPKSKEMPQLEGPPKRTLKIPASKVFSLQSKEEQEPPILQPEIEIPSFKQSLSVSPFPKKRGRPKRQMRSPVKMKPPVLSVAPFVATESPSKLESESENHRSSSDFFESEDQLQDTDDLDDSHRQSVCSMSDLEMEPDKKISKRNNGQLMKTIIRKINKMKTLKRKKLLNQILSSSVESSNKGKVQSKLHNTVSSLAATFGSKLGQQINVSKKGTIYIGKRRGRKPKTVLNGLLSGSPASLAVLEQTAQQAAGSALGQILPPLLPSPASSSEILPSPICSQSSGTSGGQSPVSSDAGFVEPSSVPYLHVHSRQGSMIQTLAMKKASKGRRRLSPPTLLPNSPSHLSELTSLKEATPSPVSESHSDETIPSDSGIGTDNNSTSDRAEKFCGQKKRRHSFEHISLIPPETSTVLNSLKEKHKHKCKRRSHDYLSYDKMKRQKRKRKKKYPQLRNRQDPDFIAELEELISRLSEIRITHRSHHFIPRDLLPTIFRINFNSFYTHPSFPLDPLHYIRKPDLKKKRGRPPKMREAMAEMPFMHSLSFPLSSTGFYPSYGMPYSPSPLTAAPIGLGYYGRYPPTLYPPPPSPSFTTPLPPPSYMHAGHLLLNPTKYHKKKHKLLRQEAFLTTSRTPLLSMSTYPSVPPEMAYGWMVEHKHRHRHKHREHRSEQPQVSMDSGSSRSVLESLKRYRFGKDTVGDRYKHKEKHRCHMSCPHLSPSKNLINREEQWVSREPSESSSLALGLQTPLQIDCSESSPSLSLGGFTPNSEPASSDEHMNLFTSAIGSCRVSNPNSSCRKKLTDSPGLFPVQDTALNRPHRKEPLPSSERAIQSLAGSQSASDKPSQRSSESTNCSPTRKRSSSESTSSTGKEMLVASFGKPYFFMEQCSVKVL

IRESfinder result

IRESfinder score

0.693716136

IRES/non IRES

IRES

riboCIRC information

riboCIRC ID

NA

NA

Evidence
Peptide sequence:

NA

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