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mmu_circBrpf3_3012
Basic information of circular RNA
PanCircBase ID:
mmu_circBrpf3_3012
mm39_Chr. Position ID:
chr17|29024902|29040566|+
Gene name:
Brpf3
Transcript:
ENSMUST00000004985.11
CircRNA type:
Exonic circular (circ)RNA
Exon/Intron count:
7
Exon/intron indexes:
2,3,4,5,6,7,8
Exon/intron offsets:
0,4584,8657,11136,11557,12407,15157
Genomic length:
15664
Exon/intron sizes in nt:
1,47,11,57,13,21,29,31,00,00,000
Flanking exon/introns:
chr17:29020335-29024902|chr17:29040566-29042946
Splice length:
3012
Other database IDs:
circBase: mmu_circ_0006664, CIRCpedia: MMU_CIRCpedia_15298, circAtlas: mmu-Brpf3_0010
Human Ortholog IDs:
Mature spliced Sequence:
GTTTGCCTTCGTGGTTTCCAGTTGCCATGAGGAAGCCTCGCCGAAAGTCACGGCAGAATGCCGAGGGCCGGAGATCCCCATCCCCATACAGTCTTAAGTGCTCACCCACACGGGAGACCCTGACTTACGCCCAAGCCCAGAGGATTGTTGAGGTCGACATCGATGGCCGCCTACATCGGATCAGCATTTATGACCCACTTAAGATCATCACTGAAGATGAGCTGACTGCTCAGGATATTACCGAATGCAATAGCAACAAGGAAAACAGTGAGCAGCCCCAATTCCCTGCCAAGTCCAAGAAACCCTCATCAAAGGGCAAGAGGAAGGAGTCCTGTTCCAAGCATGCGTCCGGTACCTCCTTCCACCTCCCCCAGCCCAGCTTTCGTGTGGTGGATACGGGGAGCCAGCCAGAAGCGCCCCCATTGCCTGCTGCTTACTACCGATACATTGAGAAGCCTCCGGAAGACCTGGATGCGGAGGTAGAGTACGACATGGACGAGGAGGACATTGCCTGGCTAGACATGGTCAACGAGAAGCGCCGAGCAGACGGCCACAGCTCGGTGTCGGCAGACACCTTCGAGCTGCTGGTGGACCGGCTTGAGAAGGAATCCTACCTGGAGAGCCGCAGCAGTGGGGCCCAGCAGTCCCTAATCGACGAAGACGCCTTCTGTTGCGTGTGCCTGGACGATGAGTGCCACAATAGCAATGTCATCCTGTTCTGCGACATCTGCAACTTAGCTGTGCACCAGGAGTGCTACGGCGTTCCCTATATCCCAGAGGGCCAGTGGCTATGTCGCTGCTGCCTGCAGTCTCCCTCTCGTCCCGTGGATTGCGTCCTGTGCCCCAATAAAGGTGGGGCCTTCAAACAGACCAGTGATGGCCACTGGGCCCACGTAGTCTGCGCCATCTGGATCCCTGAGGTCTGCTTCGCTAATACCGTGTTCCTGGAGCCTATTGAGGGCATCGACAACATTCCACCCGCCCGCTGGAAGCTAACCTGCTATATCTGCAAGCAGAAAGGGCTGGGCGCGGCCATTCAGTGCCATAAAGTGAACTGCTACACCGCTTTCCACGTGACATGCGCGCAGCGGGCTGGGCTCTTCATGAAGATTGAACCCATGAGAGAAACCAGCCTCAACGGCACCACCTTTACTGTTCGCAAGACTGCGTATTGTGAGGCCCACTCTCCAAGTGTGGCCGTTGCCAGGAGAAAGGGCGACTCCCCAAGGAGCCTCAGTGAAGTCGGGGATGAGGATGGGCCGAAAGAGGGTGGAGGGGAGGAGGAGCAGGAAGAAGCTGAGGAGGAGGGCCAGGAAGGCCAAGGTGGGGTGGGCAGCCCCCTCAAGGGCGTGTCCAAGAAGGGTAAGATGAGTTTGAAGCAGAAGATCAAGAAGGAGCCAGAGGAAGCTGGCCGAGAGGCACCCTCCATCACTCTCCCCATGGTCACTGTCCCACAGATACCCTCTTACAGGTTGAACAAGATCTGTAGTGGTCTCTCCTTTCAGAGGAAGACCCAGTTCATGCAGCGGCTTCACAACTACTGGCTGCTGAAGCGGCAGGCTCGGAACGGTGTCCCCCTCATCAGGCGCCTGCACTCCCACTTACAGTCCCAGAGAAATGCTGAGCAGCGGGAGCAGGACGAGAAGACTAGTGCAGTGAAGGAGGAGCTCAAATACTGGCAGAAACTTCGCCATGACCTGGAGCGAGCGCGGCTGCTGATCGAGCTCATCCGCAAAAGGGAGAAGCTCAAGCGGGAGCAGGTCAAAGTACAGCAGGCTGCCATGGAGCTGGAGCTGATGCCGTTTACGGTCCTGTTGAGGACGACTCTGGACCTGCTGCAGGAGAAAGACTCTGCACACATCTTTGCTGAACCTGTCAGCCTGAGTGAGGTTCCAGATTACCTGGAATTCATATCCAAGCCAATGGATTTTTCTACTATGAGGCGGAAGCTGGAATCTCACCTGTACCACACCTTGGAGGAGTTTGAGGAGGACTTTAACCTTATAGTTACCAACTGCATGAAGTATAATGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCGCCTCCGGGACCTGGGAGGGGCCATCCTGCGGCACGCCCGGCGGCAGGCAGAGAACATCGGCTATGATCCTGAGAGGGGCACCCACTTGCCCGAATCACCCAGATTGGAAGACTTTTACCGATTCTCCTGGGAGGATGTGGACAACATCCTTATCCCAGAGAACCGGGCCCATCTGTCCCCAGAGGCACAGCTGAAGGAACTGCTGGAGAAACTGGATCTGGTGAGCACCATGCGGTCCAGCGGGGCCCGCACCCGTCGTGTCCGCATGCTGCGCAGGGAGATCAATGCCCTTCGGCAAAAGCTAGCACAGCCACCGCCACCACAGCTCCTGTCACTGAACAAGACTGTGCCCAACGGGGAGCTGCCAGCAGGATCTCGGGGGGATACAGCTGTCCTGGAGCAGGCTCAGCAGGAGGAGCCAGAAGAGGAAGGGGACAGAGATGATTCAAAATTGCCTGCCCCACCAACCCTGGAGCCTACCGGGCCTGCGCCTTCCTTGTCAGAACAGGAATCCCCTCCAGATCCCCCAACCCTGAAACCCATCAGCGACAGCAAACCTTCAAGCCGGTTCCTAAAGTCCCGGAAGGTGGAAGATGAGGAGCTCTTAGAAAAATCAGCCCTGCAACTGGGGAGCGAGCCCTTGCAATGCTTGCTTAGTGACAATGGCATTGACAGACTGTCCCTCACAAACCCCGACAGCCATCCTGACACCCCTCTCGGCACCGTGGGCCGCCGAACCTCCGTCCTCTTCAAGAAGGCCAAGAATGGAGTTAAGCTACAGAGGGGTCCCGATGGGACCCTTGAGAATGGCGAGGACCATGGCCCAGAGGACGATCCTGCTTCTCCAGCCAGCACAGAGGATGAACACTATTCCCGGAAGCGGCCAAGGAGCCGGAGCTGTAGTGACAGTGAAGGGGAGAGGTCCCCTCAGCAGGAGGAAGAGACAG
Divergent primers for circular RNA PCR
Primer Set-1
Forward primer
Tm
Reverse primer
Tm
Product size
AACACTATTCCCGGAAGCGG
60.11
GCATTCTGCCGTGACTTTCG
60.18
145
Primer Set-2
Forward primer
Tm
Reverse primer
Tm
Product size
AACACTATTCCCGGAAGCGG
60.11
TATGGGGATGGGGATCTCCG
60.25
172
PCR template sequence:
GCCAGCACAGAGGATGAACACTATTCCCGGAAGCGGCCAAGGAGCCGGAGCTGTAGTGACAGTGAAGGGGAGAGGTCCCCTCAGCAGGAGGAAGAGACAGGTTTGCCTTCGTGGTTTCCAGTTGCCATGAGGAAGCCTCGCCGAAAGTCACGGCAGAATGCCGAGGGCCGGAGATCCCCATCCCCATACAGTCTTAAGTG
Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs
25
Interacting miRNAs (#binding sites)
mmu-miR-149-5p(3), mmu-miR-370-3p(3), mmu-miR-328-3p(2), mmu-miR-214-3p(2), mmu-miR-296-3p(2), mmu-miR-16-5p(1), mmu-miR-15a-5p(1), mmu-miR-103-3p(1), mmu-miR-15b-5p(1), mmu-miR-320-3p(1), mmu-miR-326-3p(1), mmu-miR-185-5p(1), mmu-miR-503-5p(1), mmu-miR-136-5p(1), mmu-miR-431-5p(1), mmu-miR-29b-1-5p(1), mmu-miR-183-5p(1), mmu-miR-541-5p(1), mmu-miR-107-3p(1), mmu-miR-499-5p(1), mmu-miR-29b-2-5p(1), mmu-miR-1187(1), mmu-miR-207(1), mmu-miR-300-3p(1), mmu-miR-3061-5p(1)
siRNAs for circular RNA silencing
Junction sequence
GAGGAAGAGACAGGTTTGCCTTCGTG
siRNA sets
NA
Protein-coding potential of circular RNAs
CPAT analysis
CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length
CIRCBRPF3_3012_ORF_1
1.0802
0.449640488
1
5997
ORF sequence:
ATGAGGAAGCCTCGCCGAAAGTCACGGCAGAATGCCGAGGGCCGGAGATCCCCATCCCCATACAGTCTTAAGTGCTCACCCACACGGGAGACCCTGACTTACGCCCAAGCCCAGAGGATTGTTGAGGTCGACATCGATGGCCGCCTACATCGGATCAGCATTTATGACCCACTTAAGATCATCACTGAAGATGAGCTGACTGCTCAGGATATTACCGAATGCAATAGCAACAAGGAAAACAGTGAGCAGCCCCAATTCCCTGCCAAGTCCAAGAAACCCTCATCAAAGGGCAAGAGGAAGGAGTCCTGTTCCAAGCATGCGTCCGGTACCTCCTTCCACCTCCCCCAGCCCAGCTTTCGTGTGGTGGATACGGGGAGCCAGCCAGAAGCGCCCCCATTGCCTGCTGCTTACTACCGATACATTGAGAAGCCTCCGGAAGACCTGGATGCGGAGGTAGAGTACGACATGGACGAGGAGGACATTGCCTGGCTAGACATGGTCAACGAGAAGCGCCGAGCAGACGGCCACAGCTCGGTGTCGGCAGACACCTTCGAGCTGCTGGTGGACCGGCTTGAGAAGGAATCCTACCTGGAGAGCCGCAGCAGTGGGGCCCAGCAGTCCCTAATCGACGAAGACGCCTTCTGTTGCGTGTGCCTGGACGATGAGTGCCACAATAGCAATGTCATCCTGTTCTGCGACATCTGCAACTTAGCTGTGCACCAGGAGTGCTACGGCGTTCCCTATATCCCAGAGGGCCAGTGGCTATGTCGCTGCTGCCTGCAGTCTCCCTCTCGTCCCGTGGATTGCGTCCTGTGCCCCAATAAAGGTGGGGCCTTCAAACAGACCAGTGATGGCCACTGGGCCCACGTAGTCTGCGCCATCTGGATCCCTGAGGTCTGCTTCGCTAATACCGTGTTCCTGGAGCCTATTGAGGGCATCGACAACATTCCACCCGCCCGCTGGAAGCTAACCTGCTATATCTGCAAGCAGAAAGGGCTGGGCGCGGCCATTCAGTGCCATAAAGTGAACTGCTACACCGCTTTCCACGTGACATGCGCGCAGCGGGCTGGGCTCTTCATGAAGATTGAACCCATGAGAGAAACCAGCCTCAACGGCACCACCTTTACTGTTCGCAAGACTGCGTATTGTGAGGCCCACTCTCCAAGTGTGGCCGTTGCCAGGAGAAAGGGCGACTCCCCAAGGAGCCTCAGTGAAGTCGGGGATGAGGATGGGCCGAAAGAGGGTGGAGGGGAGGAGGAGCAGGAAGAAGCTGAGGAGGAGGGCCAGGAAGGCCAAGGTGGGGTGGGCAGCCCCCTCAAGGGCGTGTCCAAGAAGGGTAAGATGAGTTTGAAGCAGAAGATCAAGAAGGAGCCAGAGGAAGCTGGCCGAGAGGCACCCTCCATCACTCTCCCCATGGTCACTGTCCCACAGATACCCTCTTACAGGTTGAACAAGATCTGTAGTGGTCTCTCCTTTCAGAGGAAGACCCAGTTCATGCAGCGGCTTCACAACTACTGGCTGCTGAAGCGGCAGGCTCGGAACGGTGTCCCCCTCATCAGGCGCCTGCACTCCCACTTACAGTCCCAGAGAAATGCTGAGCAGCGGGAGCAGGACGAGAAGACTAGTGCAGTGAAGGAGGAGCTCAAATACTGGCAGAAACTTCGCCATGACCTGGAGCGAGCGCGGCTGCTGATCGAGCTCATCCGCAAAAGGGAGAAGCTCAAGCGGGAGCAGGTCAAAGTACAGCAGGCTGCCATGGAGCTGGAGCTGATGCCGTTTACGGTCCTGTTGAGGACGACTCTGGACCTGCTGCAGGAGAAAGACTCTGCACACATCTTTGCTGAACCTGTCAGCCTGAGTGAGGTTCCAGATTACCTGGAATTCATATCCAAGCCAATGGATTTTTCTACTATGAGGCGGAAGCTGGAATCTCACCTGTACCACACCTTGGAGGAGTTTGAGGAGGACTTTAACCTTATAGTTACCAACTGCATGAAGTATAATGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCGCCTCCGGGACCTGGGAGGGGCCATCCTGCGGCACGCCCGGCGGCAGGCAGAGAACATCGGCTATGATCCTGAGAGGGGCACCCACTTGCCCGAATCACCCAGATTGGAAGACTTTTACCGATTCTCCTGGGAGGATGTGGACAACATCCTTATCCCAGAGAACCGGGCCCATCTGTCCCCAGAGGCACAGCTGAAGGAACTGCTGGAGAAACTGGATCTGGTGAGCACCATGCGGTCCAGCGGGGCCCGCACCCGTCGTGTCCGCATGCTGCGCAGGGAGATCAATGCCCTTCGGCAAAAGCTAGCACAGCCACCGCCACCACAGCTCCTGTCACTGAACAAGACTGTGCCCAACGGGGAGCTGCCAGCAGGATCTCGGGGGGATACAGCTGTCCTGGAGCAGGCTCAGCAGGAGGAGCCAGAAGAGGAAGGGGACAGAGATGATTCAAAATTGCCTGCCCCACCAACCCTGGAGCCTACCGGGCCTGCGCCTTCCTTGTCAGAACAGGAATCCCCTCCAGATCCCCCAACCCTGAAACCCATCAGCGACAGCAAACCTTCAAGCCGGTTCCTAAAGTCCCGGAAGGTGGAAGATGAGGAGCTCTTAGAAAAATCAGCCCTGCAACTGGGGAGCGAGCCCTTGCAATGCTTGCTTAGTGACAATGGCATTGACAGACTGTCCCTCACAAACCCCGACAGCCATCCTGACACCCCTCTCGGCACCGTGGGCCGCCGAACCTCCGTCCTCTTCAAGAAGGCCAAGAATGGAGTTAAGCTACAGAGGGGTCCCGATGGGACCCTTGAGAATGGCGAGGACCATGGCCCAGAGGACGATCCTGCTTCTCCAGCCAGCACAGAGGATGAACACTATTCCCGGAAGCGGCCAAGGAGCCGGAGCTGTAGTGACAGTGAAGGGGAGAGGTCCCCTCAGCAGGAGGAAGAGACAGGTTTGCCTTCGTGGTTTCCAGTTGCCATGAGGAAGCCTCGCCGAAAGTCACGGCAGAATGCCGAGGGCCGGAGATCCCCATCCCCATACAGTCTTAAGTGCTCACCCACACGGGAGACCCTGACTTACGCCCAAGCCCAGAGGATTGTTGAGGTCGACATCGATGGCCGCCTACATCGGATCAGCATTTATGACCCACTTAAGATCATCACTGAAGATGAGCTGACTGCTCAGGATATTACCGAATGCAATAGCAACAAGGAAAACAGTGAGCAGCCCCAATTCCCTGCCAAGTCCAAGAAACCCTCATCAAAGGGCAAGAGGAAGGAGTCCTGTTCCAAGCATGCGTCCGGTACCTCCTTCCACCTCCCCCAGCCCAGCTTTCGTGTGGTGGATACGGGGAGCCAGCCAGAAGCGCCCCCATTGCCTGCTGCTTACTACCGATACATTGAGAAGCCTCCGGAAGACCTGGATGCGGAGGTAGAGTACGACATGGACGAGGAGGACATTGCCTGGCTAGACATGGTCAACGAGAAGCGCCGAGCAGACGGCCACAGCTCGGTGTCGGCAGACACCTTCGAGCTGCTGGTGGACCGGCTTGAGAAGGAATCCTACCTGGAGAGCCGCAGCAGTGGGGCCCAGCAGTCCCTAATCGACGAAGACGCCTTCTGTTGCGTGTGCCTGGACGATGAGTGCCACAATAGCAATGTCATCCTGTTCTGCGACATCTGCAACTTAGCTGTGCACCAGGAGTGCTACGGCGTTCCCTATATCCCAGAGGGCCAGTGGCTATGTCGCTGCTGCCTGCAGTCTCCCTCTCGTCCCGTGGATTGCGTCCTGTGCCCCAATAAAGGTGGGGCCTTCAAACAGACCAGTGATGGCCACTGGGCCCACGTAGTCTGCGCCATCTGGATCCCTGAGGTCTGCTTCGCTAATACCGTGTTCCTGGAGCCTATTGAGGGCATCGACAACATTCCACCCGCCCGCTGGAAGCTAACCTGCTATATCTGCAAGCAGAAAGGGCTGGGCGCGGCCATTCAGTGCCATAAAGTGAACTGCTACACCGCTTTCCACGTGACATGCGCGCAGCGGGCTGGGCTCTTCATGAAGATTGAACCCATGAGAGAAACCAGCCTCAACGGCACCACCTTTACTGTTCGCAAGACTGCGTATTGTGAGGCCCACTCTCCAAGTGTGGCCGTTGCCAGGAGAAAGGGCGACTCCCCAAGGAGCCTCAGTGAAGTCGGGGATGAGGATGGGCCGAAAGAGGGTGGAGGGGAGGAGGAGCAGGAAGAAGCTGAGGAGGAGGGCCAGGAAGGCCAAGGTGGGGTGGGCAGCCCCCTCAAGGGCGTGTCCAAGAAGGGTAAGATGAGTTTGAAGCAGAAGATCAAGAAGGAGCCAGAGGAAGCTGGCCGAGAGGCACCCTCCATCACTCTCCCCATGGTCACTGTCCCACAGATACCCTCTTACAGGTTGAACAAGATCTGTAGTGGTCTCTCCTTTCAGAGGAAGACCCAGTTCATGCAGCGGCTTCACAACTACTGGCTGCTGAAGCGGCAGGCTCGGAACGGTGTCCCCCTCATCAGGCGCCTGCACTCCCACTTACAGTCCCAGAGAAATGCTGAGCAGCGGGAGCAGGACGAGAAGACTAGTGCAGTGAAGGAGGAGCTCAAATACTGGCAGAAACTTCGCCATGACCTGGAGCGAGCGCGGCTGCTGATCGAGCTCATCCGCAAAAGGGAGAAGCTCAAGCGGGAGCAGGTCAAAGTACAGCAGGCTGCCATGGAGCTGGAGCTGATGCCGTTTACGGTCCTGTTGAGGACGACTCTGGACCTGCTGCAGGAGAAAGACTCTGCACACATCTTTGCTGAACCTGTCAGCCTGAGTGAGGTTCCAGATTACCTGGAATTCATATCCAAGCCAATGGATTTTTCTACTATGAGGCGGAAGCTGGAATCTCACCTGTACCACACCTTGGAGGAGTTTGAGGAGGACTTTAACCTTATAGTTACCAACTGCATGAAGTATAATGCTAAAGACACAATTTTCCACCGAGCAGCTGTCCGCCTCCGGGACCTGGGAGGGGCCATCCTGCGGCACGCCCGGCGGCAGGCAGAGAACATCGGCTATGATCCTGAGAGGGGCACCCACTTGCCCGAATCACCCAGATTGGAAGACTTTTACCGATTCTCCTGGGAGGATGTGGACAACATCCTTATCCCAGAGAACCGGGCCCATCTGTCCCCAGAGGCACAGCTGAAGGAACTGCTGGAGAAACTGGATCTGGTGAGCACCATGCGGTCCAGCGGGGCCCGCACCCGTCGTGTCCGCATGCTGCGCAGGGAGATCAATGCCCTTCGGCAAAAGCTAGCACAGCCACCGCCACCACAGCTCCTGTCACTGAACAAGACTGTGCCCAACGGGGAGCTGCCAGCAGGATCTCGGGGGGATACAGCTGTCCTGGAGCAGGCTCAGCAGGAGGAGCCAGAAGAGGAAGGGGACAGAGATGATTCAAAATTGCCTGCCCCACCAACCCTGGAGCCTACCGGGCCTGCGCCTTCCTTGTCAGAACAGGAATCCCCTCCAGATCCCCCAACCCTGAAACCCATCAGCGACAGCAAACCTTCAAGCCGGTTCCTAAAGTCCCGGAAGGTGGAAGATGAGGAGCTCTTAGAAAAATCAGCCCTGCAACTGGGGAGCGAGCCCTTGCAATGCTTGCTTAGTGACAATGGCATTGACAGACTGTCCCTCACAAACCCCGACAGCCATCCTGACACCCCTCTCGGCACCGTGGGCCGCCGAACCTCCGTCCTCTTCAAGAAGGCCAAGAATGGAGTTAAGCTACAGAGGGGTCCCGATGGGACCCTTGAGAATGGCGAGGACCATGGCCCAGAGGACGATCCTGCTTCTCCAGCCAGCACAGAGGATGAACACTATTCCCGGAAGCGGCCAAGGAGCCGGAGCTGTAGTGACAGTGAAGGGGAGAGGTCCCCTCAGCAGGAGGAAGAGACA
Peptide sequence:
MRKPRRKSRQNAEGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDIDGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPQFPAKSKKPSSKGKRKESCSKHASGTSFHLPQPSFRVVDTGSQPEAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDIAWLDMVNEKRRADGHSSVSADTFELLVDRLEKESYLESRSSGAQQSLIDEDAFCCVCLDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRPVDCVLCPNKGGAFKQTSDGHWAHVVCAIWIPEVCFANTVFLEPIEGIDNIPPARWKLTCYICKQKGLGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPMRETSLNGTTFTVRKTAYCEAHSPSVAVARRKGDSPRSLSEVGDEDGPKEGGGEEEQEEAEEEGQEGQGGVGSPLKGVSKKGKMSLKQKIKKEPEEAGREAPSITLPMVTVPQIPSYRLNKICSGLSFQRKTQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAMELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERGTHLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTRRVRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGDRDDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKSALQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDGTLENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGLPSWFPVAMRKPRRKSRQNAEGRRSPSPYSLKCSPTRETLTYAQAQRIVEVDIDGRLHRISIYDPLKIITEDELTAQDITECNSNKENSEQPQFPAKSKKPSSKGKRKESCSKHASGTSFHLPQPSFRVVDTGSQPEAPPLPAAYYRYIEKPPEDLDAEVEYDMDEEDIAWLDMVNEKRRADGHSSVSADTFELLVDRLEKESYLESRSSGAQQSLIDEDAFCCVCLDDECHNSNVILFCDICNLAVHQECYGVPYIPEGQWLCRCCLQSPSRPVDCVLCPNKGGAFKQTSDGHWAHVVCAIWIPEVCFANTVFLEPIEGIDNIPPARWKLTCYICKQKGLGAAIQCHKVNCYTAFHVTCAQRAGLFMKIEPMRETSLNGTTFTVRKTAYCEAHSPSVAVARRKGDSPRSLSEVGDEDGPKEGGGEEEQEEAEEEGQEGQGGVGSPLKGVSKKGKMSLKQKIKKEPEEAGREAPSITLPMVTVPQIPSYRLNKICSGLSFQRKTQFMQRLHNYWLLKRQARNGVPLIRRLHSHLQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAMELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESHLYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERGTHLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTRRVRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGDRDDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKSALQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDGTLENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEET
IRESfinder result
IRESfinder score
0.347050718
IRES/non IRES
non-IRES
riboCIRC information
riboCIRC ID
NA
NA
Evidence
Peptide sequence:
NA
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