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mmu_circAtrx_3192
Basic information of circular RNA
PanCircBase ID:
mmu_circAtrx_3192
mm39_Chr. Position ID:
chrX|104918165|104923624|-
Gene name:
Atrx
Transcript:
ENSMUST00000113573.8
CircRNA type:
Exonic circular (circ)RNA
Exon/Intron count:
3
Exon/intron indexes:
9,8,7
Exon/intron offsets:
0,3807,5349
Genomic length:
5459
Exon/intron sizes in nt:
30,14,68,110
Flanking exon/introns:
chrX:104911529-104918165|chrX:104923624-104927912
Splice length:
3192
Other database IDs:
circAtlas: mmu-Atrx_0033
circBase: hsa_circ_0140617, circAtlas: hsa-ATRX_0030, CIRCpedia: HSA_CIRCpedia_114254
Human Ortholog IDs:
Mature spliced Sequence:
AAGATGGACTTCATGGGATCGTGAGCTGCACAGCTTGTGGACAGCAGGTCAATCATTTTCAAAAAGATTCCATTTATAGACACCCTTCACTCAAAGTCCTTATCTGTAAGAACTGCTTTAAGTATTATATGAGTGACGATATTAGCCGTGACTCAGATGGAATGGATGAACAATGTAGATGGTGTGCAGAAGGTGGGAACTTGATTTGTTGTGACTTTTGTCATAACGCCTTCTGTAAGAAATGCATCCTGCGCAACCTTGGTCGAAAGGAGTTGTCTACAATAATGGATGAAAACAATCAGTGGTATTGCTATATTTGTCAACCAGAGCCTCTACTGGACTTGGTGACTGCGTGCAACAGCGTATTTGAGAATTTAGAACAGTTGTTGCAACAGAATAAGAAGAAGATAAAAGTTGACAGTGAAAAGACTAGTAAAGTCTGTGACCAAACATCCAAATTTTCTCCAAAGAAGAGTAGTTCTAGTTGTAATGGAGAAGAAAAAAAGTTAGAGGAGTCCTGTTCTGGTTCTGTAAGCTCCACTTACTCTCACTCAGCACTATCTGTGCCCAAAGAGATGATTAAGAAGACAACAAAACTGATTGAGACTACATCCAACATGAACTCCAGTTACATTAAGTTTCTAAAACAGGCAGCAGATAATTCAGAAATGACTTCTGCTATGAAGTTATGTCAACTTAAGTCTTTTAAATCTGTGTTGGATGATATCAAGAAGGCTCATCTTGCATTAGAAGAAGATTTGAATTCAGAGATCCAAGCTTTGGATGATGTACACAAAGAAAAAAATACCAAAGACCTTAAAAGCACAGATGCTAAGTCTGAAACAAAATTAGGAAAAGGGGAAAAATCCTATTCTACAGAAAAGAGAGAGTTTTTAAAGTTAGATGCTAGATCATCAGTAAAGGCCATAGATGGTGAAGAGCAGAGAGCACACAAAAGTACTAGTGGGGAACATAAGGGTTCAGGTAGGAAAGATGGCTCTCAGTATGAACCCACTAACACTCCTGAGGATTTAGATATGGATATTGTGTCTGTTCCTTCCTCGGTTCCAGAAGACATTTTTGATAGCCTTGAGAGTGCTATGGAAGTTCAGAGTTCAGCTGATTATCAAGGAGACGGCAACAGTGGGACTGAGCCAGAACTGGAGAGCTCCTCTGTAAAATTAAATGTTTCTTCAAAAGACAGCAGAGGAAATATTAAGTCAAAAGTCACAGCGAAAGTAAGAAAAGAATTATTTGTTAAACTTACCCCAGTTTCCCTTTCTAATTCCCCAATTAAAGGTGTTGACTGTCAGGAAGTGTCACAAGAGAAGAATGGCCGTAAAAGTTCTGGGGTGGCCCGCAGCTCAGAGAAATGTAGACCCAGAGAGGAAATTAGTGATCATGAAAACAATGTCACAATACTTTTAGAAGACTCCGATCTTCGAAGATCCCCACGTGTAAAAACTACACCGTTGAGGCGACAGACAGAAAGCAACCCTGCAATGTCGAATTCAGATGAAGAAAGTAATGGAACTATGAAGGAGAAACAAAAGATGTCAGGTCCAATAAGAAAAAAGGATAAGAGAAACTCAGCTGACTGTGCTACTGATAACCCTAAACCTCACAAGGTACCCAAAGCTAAGCAACCAGTGATTGGGGATCAGAATTCAGATTCTGATGAAATGCTAGCAGTCCTCAAAGAGGCAAGTCAGATGGGGCATAGTTCTTCCTCAGACACTGACATTAATGAACCACAGATGAATCATAAAGGTAAAACAGGGAAAGATGATAATGGAAAAAGGAAACGGAAAAATTCTACTTCCGGGTCAGATTTTGACACTAAAAAAGGAAAATCAACAGAAACCTCTATTATCTCTAAAAAGAAACGCCAGAACTACTCAGAGTCCTCTAACTATGACTCAGAGTTAGAGAGAGAGATAAAAACCATGAGCAGAATTGGGGCTGCCAGAAAAAGTGTTCCAGAGAAAAAAGAAGAGGACTCTTCTGAAGATGAAAAACAGGGCAAAAAAGTAGTGGATAATGGAGGGCATGAGAGGGCGAAGACAACACAAGAAGGGTCATCTGCTGATGACACTGGTGACACTGAAGGCAGGCAGGGAGGGAGTTGCTCCATAGCAGGAGGTTCCATTGAGAAAGTCAGGAGTGGAGTGGAATTCCGAGAGATGCTTTGCAAACCTGGTGTTTCCTCTGATGGTGCTGAAAAGCCTTCAGTGAAAGAGGAGAACGTGAATTCCCCTGAAGACAAAAGAGTCTCTAAGACTAAAGAAAAGACTAAACATCTGAGAAGCAGACAAAGTAGAAAAGGAAAGGGTGGGTCATCTGATGGCACTGATCGATTTCCAAAGAAAGAGCAGAGCGATGAGTCTTCTGAAGGCGAAAAGAAGCAGAGCAGACAGAGACCTGGAACAAAAGGAAAGAAAGCCCCAGACTTAAAGGGAGAAACACTGAAGCGAGAGCAGGAGTGGGACTCTTCCTCTGATGGGACCGAGAGATTGCCGGAGGAAGAGGAGATTGGTCCTTTTTCTAAAGGCATAAAGCAAAGTAAAACTGACACAGCTGGTGGAGAAAAGAAAGGCAAAAAATGGAAAGATAAATCATGTGAAAAGAAGGAAGAATTATCTGATAGTGTTGATAAATTGCCAGGAAAAGGAGATAGTTGTGACTCTTCCGAAGATAAGAAGACCAGGAACAGAGTGTCTCTGAGAGAGAAGAAACGATTCAGCTTGCCTGCAAAGAGTCCAGGGAAGAGGCCAGAGTGTTCATCGTCAGATACTGAGAAATCCTTGAAAGGACAGTGTTGTGACTCCACTGAAAAGAGACCGAAAAGAATTGACTTGAGAGAAAGAAGAAACTCCAGTTCAAAGAGAAATACCAAGGAAGTAAAGAGTGCTTCATCCTCTTCTGATGCTGAGGGAAGCTCAGAAGATAATAAAAAGCAGAAGAAACAAAGAACTTCAGCCAAAAAGAAGACAGGCAATACGAAGGAGAAAAAAAGAAACTCCTTAAGAGCAACTCCTAAAAGGAAGCAAGTAGACATCACTTCTTCATCTTCTGATATAGGAGATGATGATCAGAATTCTGCAGGCGAGGAAAGCAGCGATGAACAGAAAATCAAACCCGTGACTGAAAATCTAGTGCTGCCTTCACACACTGGATTTTGTCAGTCTTCAG
Divergent primers for circular RNA PCR
Primer Set-1
Forward primer
Tm
Reverse primer
Tm
Product size
CAGAATTCTGCAGGCGAGGA
60.11
TGATTGACCTGCTGTCCACA
59.24
155
Primer Set-2
Forward primer
Tm
Reverse primer
Tm
Product size
CAGAATTCTGCAGGCGAGGA
60.11
TTGACCTGCTGTCCACAAGC
60.82
152
PCR template sequence:
CAGAATTCTGCAGGCGAGGAAAGCAGCGATGAACAGAAAATCAAACCCGTGACTGAAAATCTAGTGCTGCCTTCACACACTGGATTTTGTCAGTCTTCAGAAGATGGACTTCATGGGATCGTGAGCTGCACAGCTTGTGGACAGCAGGTCAATCATTTTCAAAAAGATTCCATTTATAGACACCCTTCACTCAAAGTCCT
Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs
17
Interacting miRNAs (#binding sites)
mmu-miR-200a-3p(2), mmu-miR-141-3p(2), mmu-miR-335-3p(2), mmu-miR-7b-5p(1), mmu-miR-29b-3p(1), mmu-miR-29a-3p(1), mmu-miR-29c-3p(1), mmu-miR-328-3p(1), mmu-miR-24-3p(1), mmu-miR-149-5p(1), mmu-miR-300-3p(1), mmu-miR-673-5p(1), mmu-miR-5101(1), mmu-miR-369-3p(1), mmu-miR-532-5p(1), mmu-miR-1199-5p(1), mmu-miR-7a-1-3p(1)
siRNAs for circular RNA silencing
Junction sequence
TGTCAGTCTTCAGAAGATGGACTTCA
siRNA sets
NA
Protein-coding potential of circular RNAs
CPAT analysis
CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length
CIRCATRX_3192_ORF_1
1.0044
0.113781775
1
6255
ORF sequence:
ATGAGTGACGATATTAGCCGTGACTCAGATGGAATGGATGAACAATGTAGATGGTGTGCAGAAGGTGGGAACTTGATTTGTTGTGACTTTTGTCATAACGCCTTCTGTAAGAAATGCATCCTGCGCAACCTTGGTCGAAAGGAGTTGTCTACAATAATGGATGAAAACAATCAGTGGTATTGCTATATTTGTCAACCAGAGCCTCTACTGGACTTGGTGACTGCGTGCAACAGCGTATTTGAGAATTTAGAACAGTTGTTGCAACAGAATAAGAAGAAGATAAAAGTTGACAGTGAAAAGACTAGTAAAGTCTGTGACCAAACATCCAAATTTTCTCCAAAGAAGAGTAGTTCTAGTTGTAATGGAGAAGAAAAAAAGTTAGAGGAGTCCTGTTCTGGTTCTGTAAGCTCCACTTACTCTCACTCAGCACTATCTGTGCCCAAAGAGATGATTAAGAAGACAACAAAACTGATTGAGACTACATCCAACATGAACTCCAGTTACATTAAGTTTCTAAAACAGGCAGCAGATAATTCAGAAATGACTTCTGCTATGAAGTTATGTCAACTTAAGTCTTTTAAATCTGTGTTGGATGATATCAAGAAGGCTCATCTTGCATTAGAAGAAGATTTGAATTCAGAGATCCAAGCTTTGGATGATGTACACAAAGAAAAAAATACCAAAGACCTTAAAAGCACAGATGCTAAGTCTGAAACAAAATTAGGAAAAGGGGAAAAATCCTATTCTACAGAAAAGAGAGAGTTTTTAAAGTTAGATGCTAGATCATCAGTAAAGGCCATAGATGGTGAAGAGCAGAGAGCACACAAAAGTACTAGTGGGGAACATAAGGGTTCAGGTAGGAAAGATGGCTCTCAGTATGAACCCACTAACACTCCTGAGGATTTAGATATGGATATTGTGTCTGTTCCTTCCTCGGTTCCAGAAGACATTTTTGATAGCCTTGAGAGTGCTATGGAAGTTCAGAGTTCAGCTGATTATCAAGGAGACGGCAACAGTGGGACTGAGCCAGAACTGGAGAGCTCCTCTGTAAAATTAAATGTTTCTTCAAAAGACAGCAGAGGAAATATTAAGTCAAAAGTCACAGCGAAAGTAAGAAAAGAATTATTTGTTAAACTTACCCCAGTTTCCCTTTCTAATTCCCCAATTAAAGGTGTTGACTGTCAGGAAGTGTCACAAGAGAAGAATGGCCGTAAAAGTTCTGGGGTGGCCCGCAGCTCAGAGAAATGTAGACCCAGAGAGGAAATTAGTGATCATGAAAACAATGTCACAATACTTTTAGAAGACTCCGATCTTCGAAGATCCCCACGTGTAAAAACTACACCGTTGAGGCGACAGACAGAAAGCAACCCTGCAATGTCGAATTCAGATGAAGAAAGTAATGGAACTATGAAGGAGAAACAAAAGATGTCAGGTCCAATAAGAAAAAAGGATAAGAGAAACTCAGCTGACTGTGCTACTGATAACCCTAAACCTCACAAGGTACCCAAAGCTAAGCAACCAGTGATTGGGGATCAGAATTCAGATTCTGATGAAATGCTAGCAGTCCTCAAAGAGGCAAGTCAGATGGGGCATAGTTCTTCCTCAGACACTGACATTAATGAACCACAGATGAATCATAAAGGTAAAACAGGGAAAGATGATAATGGAAAAAGGAAACGGAAAAATTCTACTTCCGGGTCAGATTTTGACACTAAAAAAGGAAAATCAACAGAAACCTCTATTATCTCTAAAAAGAAACGCCAGAACTACTCAGAGTCCTCTAACTATGACTCAGAGTTAGAGAGAGAGATAAAAACCATGAGCAGAATTGGGGCTGCCAGAAAAAGTGTTCCAGAGAAAAAAGAAGAGGACTCTTCTGAAGATGAAAAACAGGGCAAAAAAGTAGTGGATAATGGAGGGCATGAGAGGGCGAAGACAACACAAGAAGGGTCATCTGCTGATGACACTGGTGACACTGAAGGCAGGCAGGGAGGGAGTTGCTCCATAGCAGGAGGTTCCATTGAGAAAGTCAGGAGTGGAGTGGAATTCCGAGAGATGCTTTGCAAACCTGGTGTTTCCTCTGATGGTGCTGAAAAGCCTTCAGTGAAAGAGGAGAACGTGAATTCCCCTGAAGACAAAAGAGTCTCTAAGACTAAAGAAAAGACTAAACATCTGAGAAGCAGACAAAGTAGAAAAGGAAAGGGTGGGTCATCTGATGGCACTGATCGATTTCCAAAGAAAGAGCAGAGCGATGAGTCTTCTGAAGGCGAAAAGAAGCAGAGCAGACAGAGACCTGGAACAAAAGGAAAGAAAGCCCCAGACTTAAAGGGAGAAACACTGAAGCGAGAGCAGGAGTGGGACTCTTCCTCTGATGGGACCGAGAGATTGCCGGAGGAAGAGGAGATTGGTCCTTTTTCTAAAGGCATAAAGCAAAGTAAAACTGACACAGCTGGTGGAGAAAAGAAAGGCAAAAAATGGAAAGATAAATCATGTGAAAAGAAGGAAGAATTATCTGATAGTGTTGATAAATTGCCAGGAAAAGGAGATAGTTGTGACTCTTCCGAAGATAAGAAGACCAGGAACAGAGTGTCTCTGAGAGAGAAGAAACGATTCAGCTTGCCTGCAAAGAGTCCAGGGAAGAGGCCAGAGTGTTCATCGTCAGATACTGAGAAATCCTTGAAAGGACAGTGTTGTGACTCCACTGAAAAGAGACCGAAAAGAATTGACTTGAGAGAAAGAAGAAACTCCAGTTCAAAGAGAAATACCAAGGAAGTAAAGAGTGCTTCATCCTCTTCTGATGCTGAGGGAAGCTCAGAAGATAATAAAAAGCAGAAGAAACAAAGAACTTCAGCCAAAAAGAAGACAGGCAATACGAAGGAGAAAAAAAGAAACTCCTTAAGAGCAACTCCTAAAAGGAAGCAAGTAGACATCACTTCTTCATCTTCTGATATAGGAGATGATGATCAGAATTCTGCAGGCGAGGAAAGCAGCGATGAACAGAAAATCAAACCCGTGACTGAAAATCTAGTGCTGCCTTCACACACTGGATTTTGTCAGTCTTCAGAAGATGGACTTCATGGGATCGTGAGCTGCACAGCTTGTGGACAGCAGGTCAATCATTTTCAAAAAGATTCCATTTATAGACACCCTTCACTCAAAGTCCTTATCTGTAAGAACTGCTTTAAGTATTATATGAGTGACGATATTAGCCGTGACTCAGATGGAATGGATGAACAATGTAGATGGTGTGCAGAAGGTGGGAACTTGATTTGTTGTGACTTTTGTCATAACGCCTTCTGTAAGAAATGCATCCTGCGCAACCTTGGTCGAAAGGAGTTGTCTACAATAATGGATGAAAACAATCAGTGGTATTGCTATATTTGTCAACCAGAGCCTCTACTGGACTTGGTGACTGCGTGCAACAGCGTATTTGAGAATTTAGAACAGTTGTTGCAACAGAATAAGAAGAAGATAAAAGTTGACAGTGAAAAGACTAGTAAAGTCTGTGACCAAACATCCAAATTTTCTCCAAAGAAGAGTAGTTCTAGTTGTAATGGAGAAGAAAAAAAGTTAGAGGAGTCCTGTTCTGGTTCTGTAAGCTCCACTTACTCTCACTCAGCACTATCTGTGCCCAAAGAGATGATTAAGAAGACAACAAAACTGATTGAGACTACATCCAACATGAACTCCAGTTACATTAAGTTTCTAAAACAGGCAGCAGATAATTCAGAAATGACTTCTGCTATGAAGTTATGTCAACTTAAGTCTTTTAAATCTGTGTTGGATGATATCAAGAAGGCTCATCTTGCATTAGAAGAAGATTTGAATTCAGAGATCCAAGCTTTGGATGATGTACACAAAGAAAAAAATACCAAAGACCTTAAAAGCACAGATGCTAAGTCTGAAACAAAATTAGGAAAAGGGGAAAAATCCTATTCTACAGAAAAGAGAGAGTTTTTAAAGTTAGATGCTAGATCATCAGTAAAGGCCATAGATGGTGAAGAGCAGAGAGCACACAAAAGTACTAGTGGGGAACATAAGGGTTCAGGTAGGAAAGATGGCTCTCAGTATGAACCCACTAACACTCCTGAGGATTTAGATATGGATATTGTGTCTGTTCCTTCCTCGGTTCCAGAAGACATTTTTGATAGCCTTGAGAGTGCTATGGAAGTTCAGAGTTCAGCTGATTATCAAGGAGACGGCAACAGTGGGACTGAGCCAGAACTGGAGAGCTCCTCTGTAAAATTAAATGTTTCTTCAAAAGACAGCAGAGGAAATATTAAGTCAAAAGTCACAGCGAAAGTAAGAAAAGAATTATTTGTTAAACTTACCCCAGTTTCCCTTTCTAATTCCCCAATTAAAGGTGTTGACTGTCAGGAAGTGTCACAAGAGAAGAATGGCCGTAAAAGTTCTGGGGTGGCCCGCAGCTCAGAGAAATGTAGACCCAGAGAGGAAATTAGTGATCATGAAAACAATGTCACAATACTTTTAGAAGACTCCGATCTTCGAAGATCCCCACGTGTAAAAACTACACCGTTGAGGCGACAGACAGAAAGCAACCCTGCAATGTCGAATTCAGATGAAGAAAGTAATGGAACTATGAAGGAGAAACAAAAGATGTCAGGTCCAATAAGAAAAAAGGATAAGAGAAACTCAGCTGACTGTGCTACTGATAACCCTAAACCTCACAAGGTACCCAAAGCTAAGCAACCAGTGATTGGGGATCAGAATTCAGATTCTGATGAAATGCTAGCAGTCCTCAAAGAGGCAAGTCAGATGGGGCATAGTTCTTCCTCAGACACTGACATTAATGAACCACAGATGAATCATAAAGGTAAAACAGGGAAAGATGATAATGGAAAAAGGAAACGGAAAAATTCTACTTCCGGGTCAGATTTTGACACTAAAAAAGGAAAATCAACAGAAACCTCTATTATCTCTAAAAAGAAACGCCAGAACTACTCAGAGTCCTCTAACTATGACTCAGAGTTAGAGAGAGAGATAAAAACCATGAGCAGAATTGGGGCTGCCAGAAAAAGTGTTCCAGAGAAAAAAGAAGAGGACTCTTCTGAAGATGAAAAACAGGGCAAAAAAGTAGTGGATAATGGAGGGCATGAGAGGGCGAAGACAACACAAGAAGGGTCATCTGCTGATGACACTGGTGACACTGAAGGCAGGCAGGGAGGGAGTTGCTCCATAGCAGGAGGTTCCATTGAGAAAGTCAGGAGTGGAGTGGAATTCCGAGAGATGCTTTGCAAACCTGGTGTTTCCTCTGATGGTGCTGAAAAGCCTTCAGTGAAAGAGGAGAACGTGAATTCCCCTGAAGACAAAAGAGTCTCTAAGACTAAAGAAAAGACTAAACATCTGAGAAGCAGACAAAGTAGAAAAGGAAAGGGTGGGTCATCTGATGGCACTGATCGATTTCCAAAGAAAGAGCAGAGCGATGAGTCTTCTGAAGGCGAAAAGAAGCAGAGCAGACAGAGACCTGGAACAAAAGGAAAGAAAGCCCCAGACTTAAAGGGAGAAACACTGAAGCGAGAGCAGGAGTGGGACTCTTCCTCTGATGGGACCGAGAGATTGCCGGAGGAAGAGGAGATTGGTCCTTTTTCTAAAGGCATAAAGCAAAGTAAAACTGACACAGCTGGTGGAGAAAAGAAAGGCAAAAAATGGAAAGATAAATCATGTGAAAAGAAGGAAGAATTATCTGATAGTGTTGATAAATTGCCAGGAAAAGGAGATAGTTGTGACTCTTCCGAAGATAAGAAGACCAGGAACAGAGTGTCTCTGAGAGAGAAGAAACGATTCAGCTTGCCTGCAAAGAGTCCAGGGAAGAGGCCAGAGTGTTCATCGTCAGATACTGAGAAATCCTTGAAAGGACAGTGTTGTGACTCCACTGAAAAGAGACCGAAAAGAATTGACTTGAGAGAAAGAAGAAACTCCAGTTCAAAGAGAAATACCAAGGAAGTAAAGAGTGCTTCATCCTCTTCTGATGCTGAGGGAAGCTCAGAAGATAATAAAAAGCAGAAGAAACAAAGAACTTCAGCCAAAAAGAAGACAGGCAATACGAAGGAGAAAAAAAGAAACTCCTTAAGAGCAACTCCTAAAAGGAAGCAAGTAGACATCACTTCTTCATCTTCTGATATAGGAGATGATGATCAGAATTCTGCAGGCGAGGAAAGCAGCGATGAACAGAAAATCAAACCCGTGACTGAAAATCTAGTGCTGCCTTCACACACTGGATTTTGTCAGTCTTCA
Peptide sequence:
MSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICQPEPLLDLVTACNSVFENLEQLLQQNKKKIKVDSEKTSKVCDQTSKFSPKKSSSSCNGEEKKLEESCSGSVSSTYSHSALSVPKEMIKKTTKLIETTSNMNSSYIKFLKQAADNSEMTSAMKLCQLKSFKSVLDDIKKAHLALEEDLNSEIQALDDVHKEKNTKDLKSTDAKSETKLGKGEKSYSTEKREFLKLDARSSVKAIDGEEQRAHKSTSGEHKGSGRKDGSQYEPTNTPEDLDMDIVSVPSSVPEDIFDSLESAMEVQSSADYQGDGNSGTEPELESSSVKLNVSSKDSRGNIKSKVTAKVRKELFVKLTPVSLSNSPIKGVDCQEVSQEKNGRKSSGVARSSEKCRPREEISDHENNVTILLEDSDLRRSPRVKTTPLRRQTESNPAMSNSDEESNGTMKEKQKMSGPIRKKDKRNSADCATDNPKPHKVPKAKQPVIGDQNSDSDEMLAVLKEASQMGHSSSSDTDINEPQMNHKGKTGKDDNGKRKRKNSTSGSDFDTKKGKSTETSIISKKKRQNYSESSNYDSELEREIKTMSRIGAARKSVPEKKEEDSSEDEKQGKKVVDNGGHERAKTTQEGSSADDTGDTEGRQGGSCSIAGGSIEKVRSGVEFREMLCKPGVSSDGAEKPSVKEENVNSPEDKRVSKTKEKTKHLRSRQSRKGKGGSSDGTDRFPKKEQSDESSEGEKKQSRQRPGTKGKKAPDLKGETLKREQEWDSSSDGTERLPEEEEIGPFSKGIKQSKTDTAGGEKKGKKWKDKSCEKKEELSDSVDKLPGKGDSCDSSEDKKTRNRVSLREKKRFSLPAKSPGKRPECSSSDTEKSLKGQCCDSTEKRPKRIDLRERRNSSSKRNTKEVKSASSSSDAEGSSEDNKKQKKQRTSAKKKTGNTKEKKRNSLRATPKRKQVDITSSSSDIGDDDQNSAGEESSDEQKIKPVTENLVLPSHTGFCQSSEDGLHGIVSCTACGQQVNHFQKDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICQPEPLLDLVTACNSVFENLEQLLQQNKKKIKVDSEKTSKVCDQTSKFSPKKSSSSCNGEEKKLEESCSGSVSSTYSHSALSVPKEMIKKTTKLIETTSNMNSSYIKFLKQAADNSEMTSAMKLCQLKSFKSVLDDIKKAHLALEEDLNSEIQALDDVHKEKNTKDLKSTDAKSETKLGKGEKSYSTEKREFLKLDARSSVKAIDGEEQRAHKSTSGEHKGSGRKDGSQYEPTNTPEDLDMDIVSVPSSVPEDIFDSLESAMEVQSSADYQGDGNSGTEPELESSSVKLNVSSKDSRGNIKSKVTAKVRKELFVKLTPVSLSNSPIKGVDCQEVSQEKNGRKSSGVARSSEKCRPREEISDHENNVTILLEDSDLRRSPRVKTTPLRRQTESNPAMSNSDEESNGTMKEKQKMSGPIRKKDKRNSADCATDNPKPHKVPKAKQPVIGDQNSDSDEMLAVLKEASQMGHSSSSDTDINEPQMNHKGKTGKDDNGKRKRKNSTSGSDFDTKKGKSTETSIISKKKRQNYSESSNYDSELEREIKTMSRIGAARKSVPEKKEEDSSEDEKQGKKVVDNGGHERAKTTQEGSSADDTGDTEGRQGGSCSIAGGSIEKVRSGVEFREMLCKPGVSSDGAEKPSVKEENVNSPEDKRVSKTKEKTKHLRSRQSRKGKGGSSDGTDRFPKKEQSDESSEGEKKQSRQRPGTKGKKAPDLKGETLKREQEWDSSSDGTERLPEEEEIGPFSKGIKQSKTDTAGGEKKGKKWKDKSCEKKEELSDSVDKLPGKGDSCDSSEDKKTRNRVSLREKKRFSLPAKSPGKRPECSSSDTEKSLKGQCCDSTEKRPKRIDLRERRNSSSKRNTKEVKSASSSSDAEGSSEDNKKQKKQRTSAKKKTGNTKEKKRNSLRATPKRKQVDITSSSSDIGDDDQNSAGEESSDEQKIKPVTENLVLPSHTGFCQSS
IRESfinder result
IRESfinder score
0.548987643
IRES/non IRES
IRES
riboCIRC information
riboCIRC ID
NA
NA
Evidence
Peptide sequence:
NA
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