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PanCircBase
Database for pancreatic islet circular RNAs

mmu_circArid2_4620

Basic information of circular RNA

PanCircBase ID:

mmu_circArid2_4620

mm39_Chr. Position ID:

chr15|96247873|96276843|+

Gene name:

Arid2

Transcript:

ENSMUST00000096250.5

CircRNA type:

Exonic circular (circ)RNA

Exon/Intron count:

13

Exon/intron indexes:

4,5,6,7,8,9,10,11,12,13,14,15,16

Exon/intron offsets:

0,6700,8927,11581,11740,12324,12499,13602,16840,18660,19363,19927,28821

Genomic length:

28970

Exon/intron sizes in nt:

1,34,21,96,86,72,51,97,00,00,00,00,00,00,00,00,00,000

Flanking exon/introns:

chr15:96187033-96247873|chr15:96276843-96288756

Splice length:

4620

Other database IDs:

circAtlas: mmu-Arid2_0007

circAtlas: hsa-SCAF8_0001, CIRCpedia: HSA_CIRCpedia_8464

Human Ortholog IDs:

Mature spliced Sequence:

TTATCTAGAAAAGTACGAGAAAGTTCATCATTTTGGGGAAGATGATGATGAGGTACCACCAGGCAATCCAAAGCCACAGCTTCCTATTGGTGCAATCCCATCTTCCTACAATTACCAGCAACACAGCGTGTCAGATTATCTACGTCAAAGTTATGGGTTATCTATGGATTTTAATTCGCCAAATGATTATAATAAACTGGTGCTTTCACTGTTATCTGGACTCCCAAATGAAGTGGACTTCGCTATTAATGTGTGCACTCTCCTATCAAATGAAAGCAAGCACGTCATGCAGCTTGAGAAGGATCCCAAAATCATCACTTTACTGCTCGCTAATGCGGGGGTGTTCGATGACACTTTAGGATCATTCTCTTCTGTCTTTGGAGAAGAGTGGCGAGAGAAGACTGATAGAGACTTTGTTAAGTTTTGGAAAGACATTGTTGATGACAATGAAGTGCGAGATCTCATTTCTGACAGAAACAAGGCTCATGAAGATACACCAGGAGAATGGATTTGGGAATCTTTATTTCATCCACCTCGAAAGCTGGGCATTAATGACATCGAAGGCCAGCGGGTTCTGCAGATCGCAGTGATCTTGCGGAACCTCTCCTTTGAGGAGAGCAATGTTAAGCTCTTGGCAGCTAATCGCACCTGTCTGCGTTTCCTGTTGCTCTCTGCACACAGTCATTTTATTTCATTAAGGCAGCTAGGCCTGGACACCTTAGGGAATATCGCAGCTGAGCTTTTACTGGACCCTGTGGATTTCAGAACCACTCATCTGATGTTTCACACTGTTACAAAATGCCTGATGTCAAGGGATAGGTTTTTAAAGATGAGGGGCATGGAAATTTTGGGAAATCTCTGCAAAGCAGAGGATAACGGTGTTTTGATTTGTGAATATGTGGATCAAGATTCCTATAGAGAGATAATTTGTCACCTCACTCTGCCCGATGTGCTGCTGGTGACCTCAACCCTGGAGGTGCTGTACATGCTCACTGAAATGGGGGACGTGGCCTGCACAAAGATCGCGAAAGTGGAGAAGAGCATAGACGTGCTGGTGTGTCTGGTCTCTATGGACGCTCAGATGTTTGGACCTGACGCACTTGCTGCCGTGAAGCTCATTGAGCATCCGAGCTCCAGTCACCAAGTGTTATCAGAGATTAGGCCGCAAGCCATAGAGCAGGTCCAAACCCAGACCCACATAGCCTCCGGTCCAGCTTCCAGAGCAGTTGTAGCACAGCATGCTGCCCCCCCTCCAGGAATCGTGGAAATAGACAGTGAGAAGTTCGCTTGTCAGTGGCTAAATGCTCATTTTGAAGTAAATCCAGACTGTTCCGTCTCTCGGGCAGAAATGTATTCAGAGTACCTCTCAACTTGCAGTAAATTAGCTCGCGGTGGCATCCTCACATCAACTGGGTTTTATAAGTGTCTTAGAACAGTTTTTCCAAATCATACAGTGAAGAGGGTAGAAGATTCCACTAGCAGTGGGCAGGCGCATATCCATGTCATAGGAGTGAAGCGGCGGGCTCTCCCGCTCCCCATCCAGATGTACTATCAGCAGCAGCCAATTTCCACTCCTGTTGTCCGTGTTGATGCTGTTGCTGATCTATCTCCAACTCCTTCACCTGCAGGAATCCCTCATGGACCACAGGCTGCAGGGAATCATTTTCAGAGGACTCCTGTCACCAATCAATCTTCAAATTTGACTGCAACACAAATGTCTTTTCCGGTACAAGGCATTCATACTGTGGCACAGACTGTTTCCAGAATTCCACCAAATCCTTCAGTTCATACCCACCAGCAACAAAATTCTCCAGTAACTGTCATTCAGAATAAAGCTCCAATTCCTTGTGAAGTCGTTAAGGCAACAGTAATCCAGAACTCTGTGCCCCAGACGGCAGTTCCTGTGAGTATCTCTGTTGGAGGAGCACCTGCACAGAATTCTGTGGGTCAGAACCATAGTGCAGGGCCACAGCCTGTTACAGTTGTAAATTCTCAGACATTACTTCACCATCCTTCTGTGATGCCACAGCCATCTCCACTACACACAGTGGTGCCCGGACAGGTCCCTTCAGGCACTCCTGTCACAGTAATCCAGCAGACTGTACCGCAGAGTCGTATGTTTGGACGAGTACAGAGCATACCAGCGTGTACATCTACCGTCTCACAGGGTCAGCAGTTAATCACCACATCACCACAGCCTATGCACACTTCATCTCAACAGACAGCAGCTGGTAGCCAGCCACAAGACACTGTTATCATAGCACCCCCACAGTACGTAACAACTTCTGCATCCAATATCGTCTCAGCGACTTCAGTACAGAATTTCCAGGTAGCTACAGGACAGGTGGTTACCATAGCTGGTGTCCCGAGCCCACAGCCCTCCAGGGTAGGATTCCAGAACATTGCGCCCAAGCCACTTCCTTCTCAGCAAGTTTCACCATCAGTGGTCCAGCAGCCTATTCAACAACCACAGCAGCCTGCTCAGCAGAGTGTAGTGATTGTGAGCCAGCCAGCACAGCAAGGCCAGGCGTACGCACCAGCCATTCACCAGATCGTTCTCGCTAACCCGGCAGCTCTCCCTGCCGGTCAGACGGTTCAGCTAACTGGACAACCAAACATAACTCCATCGTCATCACCATCACCTGTCCCGCCTACTAATAACCAAGTCCCTACTGCCATGTCATCTTCTTCCACCCTTCAGTCACAGGGACCCCCTCCTACTGTCAGTCAGATGCTCTCTGTGAAGAGGCAGCAGCAGCAGCAGCACTCACCAGCAGCGCCAGCACAGCAGGTCCAGGTCCAGGTTCAGCAGCCGCAGCAGGTCCAGGTGCAAGTTCAGCCGCAGCAACCGAGTGCTGGGGTCGGTCAGCCTGCTCCCAACGAGTCTAGTCTCATCAAGCAGCTGCTGCTGCCAAAGCGGGGCCCTTCAACCCCAGGGGGCAAGCTTATCCTCCCAGCCCCTCAGATTCCTCCCCCTAACAATGCAAGAGCTCCTAGCCCTCAGGTGGTCTATCAGGTGGCCAATAACCAAGCAGCTGGTTTTGGAGTGCAGGGGCAAACTCCGGCTCAGCAGCTATTGGTTGGGCAGCAAAATGTTCAGTTGGTCCAAAGTGCAATGCCACCCGCAGGGGGAGTGCAAACCGTGCCCATTTCGAACTTACAAATATTGCCGGGTCCGCTGATCTCAAACAGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAACCAGGTAACTATAACAGTTGTGCCAAATACCAGTTTTGCAACTGCGACTGTGAGTCAGGGAAACGCTGCTCAGCTCATTGCGCCAGCCGGTCTTAGCATGAGCGGAGCGCAGGCAAGCGCTGGACTTCAGGTGCAGACGCTTCCAGCCGGACAATCAGCGTGTACCACTGCTCCCCTCCCGTTCAAAGGCGACAAGATCATTTGCCAAAAGGAGGAGGAGGCAAAGGAAGCAACAGGTCTACATGTTCATGAACGGAAGATTGAGGTCATGGAGAATCCTTCCTGTCGGCGAGGAACCACAAACACCAGCAACGGGGATACAAGTGAGAGTGAACTCCAGGTGGGAAGTCTTTTAAATGGGAGAAAGTATAGTGACTCAAGTCTACCTCCTTCAAACTCAGGGAAACTTCAGAGTGAGACGAGCCAGTGCTCACTAATCAGCAATGGGCCATCGTTGGAACTAGGTGAGAATGGAGCGCCTGGAAAACAGAACTCAGAACCAGTAGACATGCAGGATGTCAAAGGTGATCTGAAAAAAGCCCTCGTCAATGGAATCTGTGATTTTGATAAAGGAGATGGTTCTCATTTAAGCAAAAACATTCCAAATCACAAAACTTCTAATCATGTAGGAAATGGTGAGATATCTCCAGTAGAACCACAAGGGACTTCGGGTGCCACTCAGCAAGATACTGCCAAAGGTGACCAACTAGAAAGAGTTTCTAATGGACCTGTGTTAACTCTGGGTGGGTCACCGTCCACAAGCAGTATGCAAGAAGCCCCGAGTGTGGCGACACCGCCGTTGAGTGGTACTGACCTGCCTAACGGACCTCTAGCTTCAAGTTTGAATTCAGATGTGCCTCAGCAACGCCCAAGTGTAGTTGTCTCACCACATTCTACAGCCCCTGTCATACAGGGGCATCAAGTCATAGCAGTTCCCCACTCAGGACCTAGAGTGACCCCTTCTGCTCTATCATCTGATGCTCGGTCTACAAACGGCACAGCCGAGTGCAAAACTGTAAAGAGGCCGGCAGAGGATAATGATAGGGACACTGTCCCGGGAATCCCAAATAAAGTAGGGGTTAGAATTGTTACAATCAGCGACCCCAACAATGCTGGCTGCAGTGCAACCATGGTTGCGGTCCCAGCTGGAGCGGACCCAAGCACTGTAGCGAAAGTAGCAATAGAAAGTGCTGCTCAGCAAAAGCAGCAGCATCCACCGACCTACATGCAGAGTGTGGCCCCACAGAACACTCCTATGCCACCTTCACCAGCTGTACAAGTGCAGGGCCAGCCTAGCAGTTCTCAGCCTTCTCCAGTCAGTGCGTCCAGTCAGCATGCAGATCCAGTGAGAAAACCTGGGCAGAACTTCATGTGTCTGTGGCAGTCTTGTAAAAA

Divergent primers for circular RNA PCR

Primer Set-1

Forward primer

Tm

Reverse primer

Tm

Product size

CCAGTCAGCATGCAGATCCA

60.11

TTGGATTGCCTGGTGGTACC

59.96

141

Primer Set-2

Forward primer

Tm

Reverse primer

Tm

Product size

TCCAGTCAGCATGCAGATCC

59.82

TTGGATTGCCTGGTGGTACC

59.96

142

PCR template sequence:

GCAGTTCTCAGCCTTCTCCAGTCAGTGCGTCCAGTCAGCATGCAGATCCAGTGAGAAAACCTGGGCAGAACTTCATGTGTCTGTGGCAGTCTTGTAAAAATTATCTAGAAAAGTACGAGAAAGTTCATCATTTTGGGGAAGATGATGATGAGGTACCACCAGGCAATCCAAAGCCACAGCTTCCTATTGGTGCAATCCCA

Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.

miRNAs associated with circular RNAs

No of miRNAs

40

Interacting miRNAs (#binding sites)

mmu-miR-138-5p(3), mmu-miR-22-3p(3), mmu-miR-16-5p(2), mmu-miR-27b-3p(2), mmu-miR-32-5p(2), mmu-miR-15b-5p(2), mmu-miR-149-5p(2), mmu-miR-363-3p(2), mmu-miR-212-3p(2), mmu-miR-370-3p(2), mmu-miR-9-5p(1), mmu-miR-140-5p(1), mmu-miR-15a-5p(1), mmu-miR-27a-3p(1), mmu-miR-34a-5p(1), mmu-miR-92a-3p(1), mmu-miR-322-5p(1), mmu-miR-29b-3p(1), mmu-miR-29c-3p(1), mmu-miR-33-5p(1), mmu-miR-328-3p(1), mmu-miR-132-3p(1), mmu-miR-143-3p(1), mmu-miR-25-3p(1), mmu-miR-10b-5p(1), mmu-miR-139-5p(1), mmu-miR-10a-5p(1), mmu-miR-433-5p(1), mmu-miR-127-5p(1), mmu-miR-382-5p(1), mmu-miR-541-5p(1), mmu-miR-34b-5p(1), mmu-miR-666-5p(1), mmu-miR-342-5p(1), mmu-miR-680(1), mmu-miR-532-5p(1), mmu-miR-3470b(1), mmu-miR-350-3p(1), mmu-miR-670-5p(1), mmu-miR-490-3p(1)

siRNAs for circular RNA silencing

Junction sequence

AGTCTTGTAAAAATTATCTAGAAAAG

siRNA sets

TTTTCTAGATAATTTTTAC, TTTCTAGATAATTTTTACA, CTAGATAATTTTTACAAGA

Protein-coding potential of circular RNAs

CPAT analysis

CPAT ORF ID

CPAT Fickett

CPAT Hexamer

Coding probabilty

ORF length

CIRCARID2_4620_ORF_1

1.1234

0.115165454

1

9075

ORF sequence:

ATGGATTTTAATTCGCCAAATGATTATAATAAACTGGTGCTTTCACTGTTATCTGGACTCCCAAATGAAGTGGACTTCGCTATTAATGTGTGCACTCTCCTATCAAATGAAAGCAAGCACGTCATGCAGCTTGAGAAGGATCCCAAAATCATCACTTTACTGCTCGCTAATGCGGGGGTGTTCGATGACACTTTAGGATCATTCTCTTCTGTCTTTGGAGAAGAGTGGCGAGAGAAGACTGATAGAGACTTTGTTAAGTTTTGGAAAGACATTGTTGATGACAATGAAGTGCGAGATCTCATTTCTGACAGAAACAAGGCTCATGAAGATACACCAGGAGAATGGATTTGGGAATCTTTATTTCATCCACCTCGAAAGCTGGGCATTAATGACATCGAAGGCCAGCGGGTTCTGCAGATCGCAGTGATCTTGCGGAACCTCTCCTTTGAGGAGAGCAATGTTAAGCTCTTGGCAGCTAATCGCACCTGTCTGCGTTTCCTGTTGCTCTCTGCACACAGTCATTTTATTTCATTAAGGCAGCTAGGCCTGGACACCTTAGGGAATATCGCAGCTGAGCTTTTACTGGACCCTGTGGATTTCAGAACCACTCATCTGATGTTTCACACTGTTACAAAATGCCTGATGTCAAGGGATAGGTTTTTAAAGATGAGGGGCATGGAAATTTTGGGAAATCTCTGCAAAGCAGAGGATAACGGTGTTTTGATTTGTGAATATGTGGATCAAGATTCCTATAGAGAGATAATTTGTCACCTCACTCTGCCCGATGTGCTGCTGGTGACCTCAACCCTGGAGGTGCTGTACATGCTCACTGAAATGGGGGACGTGGCCTGCACAAAGATCGCGAAAGTGGAGAAGAGCATAGACGTGCTGGTGTGTCTGGTCTCTATGGACGCTCAGATGTTTGGACCTGACGCACTTGCTGCCGTGAAGCTCATTGAGCATCCGAGCTCCAGTCACCAAGTGTTATCAGAGATTAGGCCGCAAGCCATAGAGCAGGTCCAAACCCAGACCCACATAGCCTCCGGTCCAGCTTCCAGAGCAGTTGTAGCACAGCATGCTGCCCCCCCTCCAGGAATCGTGGAAATAGACAGTGAGAAGTTCGCTTGTCAGTGGCTAAATGCTCATTTTGAAGTAAATCCAGACTGTTCCGTCTCTCGGGCAGAAATGTATTCAGAGTACCTCTCAACTTGCAGTAAATTAGCTCGCGGTGGCATCCTCACATCAACTGGGTTTTATAAGTGTCTTAGAACAGTTTTTCCAAATCATACAGTGAAGAGGGTAGAAGATTCCACTAGCAGTGGGCAGGCGCATATCCATGTCATAGGAGTGAAGCGGCGGGCTCTCCCGCTCCCCATCCAGATGTACTATCAGCAGCAGCCAATTTCCACTCCTGTTGTCCGTGTTGATGCTGTTGCTGATCTATCTCCAACTCCTTCACCTGCAGGAATCCCTCATGGACCACAGGCTGCAGGGAATCATTTTCAGAGGACTCCTGTCACCAATCAATCTTCAAATTTGACTGCAACACAAATGTCTTTTCCGGTACAAGGCATTCATACTGTGGCACAGACTGTTTCCAGAATTCCACCAAATCCTTCAGTTCATACCCACCAGCAACAAAATTCTCCAGTAACTGTCATTCAGAATAAAGCTCCAATTCCTTGTGAAGTCGTTAAGGCAACAGTAATCCAGAACTCTGTGCCCCAGACGGCAGTTCCTGTGAGTATCTCTGTTGGAGGAGCACCTGCACAGAATTCTGTGGGTCAGAACCATAGTGCAGGGCCACAGCCTGTTACAGTTGTAAATTCTCAGACATTACTTCACCATCCTTCTGTGATGCCACAGCCATCTCCACTACACACAGTGGTGCCCGGACAGGTCCCTTCAGGCACTCCTGTCACAGTAATCCAGCAGACTGTACCGCAGAGTCGTATGTTTGGACGAGTACAGAGCATACCAGCGTGTACATCTACCGTCTCACAGGGTCAGCAGTTAATCACCACATCACCACAGCCTATGCACACTTCATCTCAACAGACAGCAGCTGGTAGCCAGCCACAAGACACTGTTATCATAGCACCCCCACAGTACGTAACAACTTCTGCATCCAATATCGTCTCAGCGACTTCAGTACAGAATTTCCAGGTAGCTACAGGACAGGTGGTTACCATAGCTGGTGTCCCGAGCCCACAGCCCTCCAGGGTAGGATTCCAGAACATTGCGCCCAAGCCACTTCCTTCTCAGCAAGTTTCACCATCAGTGGTCCAGCAGCCTATTCAACAACCACAGCAGCCTGCTCAGCAGAGTGTAGTGATTGTGAGCCAGCCAGCACAGCAAGGCCAGGCGTACGCACCAGCCATTCACCAGATCGTTCTCGCTAACCCGGCAGCTCTCCCTGCCGGTCAGACGGTTCAGCTAACTGGACAACCAAACATAACTCCATCGTCATCACCATCACCTGTCCCGCCTACTAATAACCAAGTCCCTACTGCCATGTCATCTTCTTCCACCCTTCAGTCACAGGGACCCCCTCCTACTGTCAGTCAGATGCTCTCTGTGAAGAGGCAGCAGCAGCAGCAGCACTCACCAGCAGCGCCAGCACAGCAGGTCCAGGTCCAGGTTCAGCAGCCGCAGCAGGTCCAGGTGCAAGTTCAGCCGCAGCAACCGAGTGCTGGGGTCGGTCAGCCTGCTCCCAACGAGTCTAGTCTCATCAAGCAGCTGCTGCTGCCAAAGCGGGGCCCTTCAACCCCAGGGGGCAAGCTTATCCTCCCAGCCCCTCAGATTCCTCCCCCTAACAATGCAAGAGCTCCTAGCCCTCAGGTGGTCTATCAGGTGGCCAATAACCAAGCAGCTGGTTTTGGAGTGCAGGGGCAAACTCCGGCTCAGCAGCTATTGGTTGGGCAGCAAAATGTTCAGTTGGTCCAAAGTGCAATGCCACCCGCAGGGGGAGTGCAAACCGTGCCCATTTCGAACTTACAAATATTGCCGGGTCCGCTGATCTCAAACAGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAACCAGGTAACTATAACAGTTGTGCCAAATACCAGTTTTGCAACTGCGACTGTGAGTCAGGGAAACGCTGCTCAGCTCATTGCGCCAGCCGGTCTTAGCATGAGCGGAGCGCAGGCAAGCGCTGGACTTCAGGTGCAGACGCTTCCAGCCGGACAATCAGCGTGTACCACTGCTCCCCTCCCGTTCAAAGGCGACAAGATCATTTGCCAAAAGGAGGAGGAGGCAAAGGAAGCAACAGGTCTACATGTTCATGAACGGAAGATTGAGGTCATGGAGAATCCTTCCTGTCGGCGAGGAACCACAAACACCAGCAACGGGGATACAAGTGAGAGTGAACTCCAGGTGGGAAGTCTTTTAAATGGGAGAAAGTATAGTGACTCAAGTCTACCTCCTTCAAACTCAGGGAAACTTCAGAGTGAGACGAGCCAGTGCTCACTAATCAGCAATGGGCCATCGTTGGAACTAGGTGAGAATGGAGCGCCTGGAAAACAGAACTCAGAACCAGTAGACATGCAGGATGTCAAAGGTGATCTGAAAAAAGCCCTCGTCAATGGAATCTGTGATTTTGATAAAGGAGATGGTTCTCATTTAAGCAAAAACATTCCAAATCACAAAACTTCTAATCATGTAGGAAATGGTGAGATATCTCCAGTAGAACCACAAGGGACTTCGGGTGCCACTCAGCAAGATACTGCCAAAGGTGACCAACTAGAAAGAGTTTCTAATGGACCTGTGTTAACTCTGGGTGGGTCACCGTCCACAAGCAGTATGCAAGAAGCCCCGAGTGTGGCGACACCGCCGTTGAGTGGTACTGACCTGCCTAACGGACCTCTAGCTTCAAGTTTGAATTCAGATGTGCCTCAGCAACGCCCAAGTGTAGTTGTCTCACCACATTCTACAGCCCCTGTCATACAGGGGCATCAAGTCATAGCAGTTCCCCACTCAGGACCTAGAGTGACCCCTTCTGCTCTATCATCTGATGCTCGGTCTACAAACGGCACAGCCGAGTGCAAAACTGTAAAGAGGCCGGCAGAGGATAATGATAGGGACACTGTCCCGGGAATCCCAAATAAAGTAGGGGTTAGAATTGTTACAATCAGCGACCCCAACAATGCTGGCTGCAGTGCAACCATGGTTGCGGTCCCAGCTGGAGCGGACCCAAGCACTGTAGCGAAAGTAGCAATAGAAAGTGCTGCTCAGCAAAAGCAGCAGCATCCACCGACCTACATGCAGAGTGTGGCCCCACAGAACACTCCTATGCCACCTTCACCAGCTGTACAAGTGCAGGGCCAGCCTAGCAGTTCTCAGCCTTCTCCAGTCAGTGCGTCCAGTCAGCATGCAGATCCAGTGAGAAAACCTGGGCAGAACTTCATGTGTCTGTGGCAGTCTTGTAAAAATTATCTAGAAAAGTACGAGAAAGTTCATCATTTTGGGGAAGATGATGATGAGGTACCACCAGGCAATCCAAAGCCACAGCTTCCTATTGGTGCAATCCCATCTTCCTACAATTACCAGCAACACAGCGTGTCAGATTATCTACGTCAAAGTTATGGGTTATCTATGGATTTTAATTCGCCAAATGATTATAATAAACTGGTGCTTTCACTGTTATCTGGACTCCCAAATGAAGTGGACTTCGCTATTAATGTGTGCACTCTCCTATCAAATGAAAGCAAGCACGTCATGCAGCTTGAGAAGGATCCCAAAATCATCACTTTACTGCTCGCTAATGCGGGGGTGTTCGATGACACTTTAGGATCATTCTCTTCTGTCTTTGGAGAAGAGTGGCGAGAGAAGACTGATAGAGACTTTGTTAAGTTTTGGAAAGACATTGTTGATGACAATGAAGTGCGAGATCTCATTTCTGACAGAAACAAGGCTCATGAAGATACACCAGGAGAATGGATTTGGGAATCTTTATTTCATCCACCTCGAAAGCTGGGCATTAATGACATCGAAGGCCAGCGGGTTCTGCAGATCGCAGTGATCTTGCGGAACCTCTCCTTTGAGGAGAGCAATGTTAAGCTCTTGGCAGCTAATCGCACCTGTCTGCGTTTCCTGTTGCTCTCTGCACACAGTCATTTTATTTCATTAAGGCAGCTAGGCCTGGACACCTTAGGGAATATCGCAGCTGAGCTTTTACTGGACCCTGTGGATTTCAGAACCACTCATCTGATGTTTCACACTGTTACAAAATGCCTGATGTCAAGGGATAGGTTTTTAAAGATGAGGGGCATGGAAATTTTGGGAAATCTCTGCAAAGCAGAGGATAACGGTGTTTTGATTTGTGAATATGTGGATCAAGATTCCTATAGAGAGATAATTTGTCACCTCACTCTGCCCGATGTGCTGCTGGTGACCTCAACCCTGGAGGTGCTGTACATGCTCACTGAAATGGGGGACGTGGCCTGCACAAAGATCGCGAAAGTGGAGAAGAGCATAGACGTGCTGGTGTGTCTGGTCTCTATGGACGCTCAGATGTTTGGACCTGACGCACTTGCTGCCGTGAAGCTCATTGAGCATCCGAGCTCCAGTCACCAAGTGTTATCAGAGATTAGGCCGCAAGCCATAGAGCAGGTCCAAACCCAGACCCACATAGCCTCCGGTCCAGCTTCCAGAGCAGTTGTAGCACAGCATGCTGCCCCCCCTCCAGGAATCGTGGAAATAGACAGTGAGAAGTTCGCTTGTCAGTGGCTAAATGCTCATTTTGAAGTAAATCCAGACTGTTCCGTCTCTCGGGCAGAAATGTATTCAGAGTACCTCTCAACTTGCAGTAAATTAGCTCGCGGTGGCATCCTCACATCAACTGGGTTTTATAAGTGTCTTAGAACAGTTTTTCCAAATCATACAGTGAAGAGGGTAGAAGATTCCACTAGCAGTGGGCAGGCGCATATCCATGTCATAGGAGTGAAGCGGCGGGCTCTCCCGCTCCCCATCCAGATGTACTATCAGCAGCAGCCAATTTCCACTCCTGTTGTCCGTGTTGATGCTGTTGCTGATCTATCTCCAACTCCTTCACCTGCAGGAATCCCTCATGGACCACAGGCTGCAGGGAATCATTTTCAGAGGACTCCTGTCACCAATCAATCTTCAAATTTGACTGCAACACAAATGTCTTTTCCGGTACAAGGCATTCATACTGTGGCACAGACTGTTTCCAGAATTCCACCAAATCCTTCAGTTCATACCCACCAGCAACAAAATTCTCCAGTAACTGTCATTCAGAATAAAGCTCCAATTCCTTGTGAAGTCGTTAAGGCAACAGTAATCCAGAACTCTGTGCCCCAGACGGCAGTTCCTGTGAGTATCTCTGTTGGAGGAGCACCTGCACAGAATTCTGTGGGTCAGAACCATAGTGCAGGGCCACAGCCTGTTACAGTTGTAAATTCTCAGACATTACTTCACCATCCTTCTGTGATGCCACAGCCATCTCCACTACACACAGTGGTGCCCGGACAGGTCCCTTCAGGCACTCCTGTCACAGTAATCCAGCAGACTGTACCGCAGAGTCGTATGTTTGGACGAGTACAGAGCATACCAGCGTGTACATCTACCGTCTCACAGGGTCAGCAGTTAATCACCACATCACCACAGCCTATGCACACTTCATCTCAACAGACAGCAGCTGGTAGCCAGCCACAAGACACTGTTATCATAGCACCCCCACAGTACGTAACAACTTCTGCATCCAATATCGTCTCAGCGACTTCAGTACAGAATTTCCAGGTAGCTACAGGACAGGTGGTTACCATAGCTGGTGTCCCGAGCCCACAGCCCTCCAGGGTAGGATTCCAGAACATTGCGCCCAAGCCACTTCCTTCTCAGCAAGTTTCACCATCAGTGGTCCAGCAGCCTATTCAACAACCACAGCAGCCTGCTCAGCAGAGTGTAGTGATTGTGAGCCAGCCAGCACAGCAAGGCCAGGCGTACGCACCAGCCATTCACCAGATCGTTCTCGCTAACCCGGCAGCTCTCCCTGCCGGTCAGACGGTTCAGCTAACTGGACAACCAAACATAACTCCATCGTCATCACCATCACCTGTCCCGCCTACTAATAACCAAGTCCCTACTGCCATGTCATCTTCTTCCACCCTTCAGTCACAGGGACCCCCTCCTACTGTCAGTCAGATGCTCTCTGTGAAGAGGCAGCAGCAGCAGCAGCACTCACCAGCAGCGCCAGCACAGCAGGTCCAGGTCCAGGTTCAGCAGCCGCAGCAGGTCCAGGTGCAAGTTCAGCCGCAGCAACCGAGTGCTGGGGTCGGTCAGCCTGCTCCCAACGAGTCTAGTCTCATCAAGCAGCTGCTGCTGCCAAAGCGGGGCCCTTCAACCCCAGGGGGCAAGCTTATCCTCCCAGCCCCTCAGATTCCTCCCCCTAACAATGCAAGAGCTCCTAGCCCTCAGGTGGTCTATCAGGTGGCCAATAACCAAGCAGCTGGTTTTGGAGTGCAGGGGCAAACTCCGGCTCAGCAGCTATTGGTTGGGCAGCAAAATGTTCAGTTGGTCCAAAGTGCAATGCCACCCGCAGGGGGAGTGCAAACCGTGCCCATTTCGAACTTACAAATATTGCCGGGTCCGCTGATCTCAAACAGCCCAGCAACCATTTTCCAAGGGACTTCTGGCAACCAGGTAACTATAACAGTTGTGCCAAATACCAGTTTTGCAACTGCGACTGTGAGTCAGGGAAACGCTGCTCAGCTCATTGCGCCAGCCGGTCTTAGCATGAGCGGAGCGCAGGCAAGCGCTGGACTTCAGGTGCAGACGCTTCCAGCCGGACAATCAGCGTGTACCACTGCTCCCCTCCCGTTCAAAGGCGACAAGATCATTTGCCAAAAGGAGGAGGAGGCAAAGGAAGCAACAGGTCTACATGTTCATGAACGGAAGATTGAGGTCATGGAGAATCCTTCCTGTCGGCGAGGAACCACAAACACCAGCAACGGGGATACAAGTGAGAGTGAACTCCAGGTGGGAAGTCTTTTAAATGGGAGAAAGTATAGTGACTCAAGTCTACCTCCTTCAAACTCAGGGAAACTTCAGAGTGAGACGAGCCAGTGCTCACTAATCAGCAATGGGCCATCGTTGGAACTAGGTGAGAATGGAGCGCCTGGAAAACAGAACTCAGAACCAGTAGACATGCAGGATGTCAAAGGTGATCTGAAAAAAGCCCTCGTCAATGGAATCTGTGATTTTGATAAAGGAGATGGTTCTCATTTAAGCAAAAACATTCCAAATCACAAAACTTCTAATCATGTAGGAAATGGTGAGATATCTCCAGTAGAACCACAAGGGACTTCGGGTGCCACTCAGCAAGATACTGCCAAAGGTGACCAACTAGAAAGAGTTTCTAATGGACCTGTGTTAACTCTGGGTGGGTCACCGTCCACAAGCAGTATGCAAGAAGCCCCGAGTGTGGCGACACCGCCGTTGAGTGGTACTGACCTGCCTAACGGACCTCTAGCTTCAAGTTTGAATTCAGATGTGCCTCAGCAACGCCCAAGTGTAGTTGTCTCACCACATTCTACAGCCCCTGTCATACAGGGGCATCAAGTCATAGCAGTTCCCCACTCAGGACCTAGAGTGACCCCTTCTGCTCTATCATCTGATGCTCGGTCTACAAACGGCACAGCCGAGTGCAAAACTGTAAAGAGGCCGGCAGAGGATAATGATAGGGACACTGTCCCGGGAATCCCAAATAAAGTAGGGGTTAGAATTGTTACAATCAGCGACCCCAACAATGCTGGCTGCAGTGCAACCATGGTTGCGGTCCCAGCTGGAGCGGACCCAAGCACTGTAGCGAAAGTAGCAATAGAAAGTGCTGCTCAGCAAAAGCAGCAGCATCCACCGACCTACATGCAGAGTGTGGCCCCACAGAACACTCCTATGCCACCTTCACCAGCTGTACAAGTGCAGGGCCAGCCTAGCAGTTCTCAGCCTTCTCCAGTCAGTGCGTCCAGTCAGCATGCAGATCCAGTGAGAAAACCTGGGCAGAACTTCATGTGTCTGTGGCAGTCTTGTAAA

Peptide sequence:

MDFNSPNDYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSSVFGEEWREKTDRDFVKFWKDIVDDNEVRDLISDRNKAHEDTPGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEESNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFRTTHLMFHTVTKCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVTSTLEVLYMLTEMGDVACTKIAKVEKSIDVLVCLVSMDAQMFGPDALAAVKLIEHPSSSHQVLSEIRPQAIEQVQTQTHIASGPASRAVVAQHAAPPPGIVEIDSEKFACQWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSTSSGQAHIHVIGVKRRALPLPIQMYYQQQPISTPVVRVDAVADLSPTPSPAGIPHGPQAAGNHFQRTPVTNQSSNLTATQMSFPVQGIHTVAQTVSRIPPNPSVHTHQQQNSPVTVIQNKAPIPCEVVKATVIQNSVPQTAVPVSISVGGAPAQNSVGQNHSAGPQPVTVVNSQTLLHHPSVMPQPSPLHTVVPGQVPSGTPVTVIQQTVPQSRMFGRVQSIPACTSTVSQGQQLITTSPQPMHTSSQQTAAGSQPQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQVVTIAGVPSPQPSRVGFQNIAPKPLPSQQVSPSVVQQPIQQPQQPAQQSVVIVSQPAQQGQAYAPAIHQIVLANPAALPAGQTVQLTGQPNITPSSSPSPVPPTNNQVPTAMSSSSTLQSQGPPPTVSQMLSVKRQQQQQHSPAAPAQQVQVQVQQPQQVQVQVQPQQPSAGVGQPAPNESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSAMPPAGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNAAQLIAPAGLSMSGAQASAGLQVQTLPAGQSACTTAPLPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSCRRGTTNTSNGDTSESELQVGSLLNGRKYSDSSLPPSNSGKLQSETSQCSLISNGPSLELGENGAPGKQNSEPVDMQDVKGDLKKALVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPVEPQGTSGATQQDTAKGDQLERVSNGPVLTLGGSPSTSSMQEAPSVATPPLSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTAPVIQGHQVIAVPHSGPRVTPSALSSDARSTNGTAECKTVKRPAEDNDRDTVPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAIESAAQQKQQHPPTYMQSVAPQNTPMPPSPAVQVQGQPSSSQPSPVSASSQHADPVRKPGQNFMCLWQSCKNYLEKYEKVHHFGEDDDEVPPGNPKPQLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVCTLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSSVFGEEWREKTDRDFVKFWKDIVDDNEVRDLISDRNKAHEDTPGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEESNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFRTTHLMFHTVTKCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVTSTLEVLYMLTEMGDVACTKIAKVEKSIDVLVCLVSMDAQMFGPDALAAVKLIEHPSSSHQVLSEIRPQAIEQVQTQTHIASGPASRAVVAQHAAPPPGIVEIDSEKFACQWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSTSSGQAHIHVIGVKRRALPLPIQMYYQQQPISTPVVRVDAVADLSPTPSPAGIPHGPQAAGNHFQRTPVTNQSSNLTATQMSFPVQGIHTVAQTVSRIPPNPSVHTHQQQNSPVTVIQNKAPIPCEVVKATVIQNSVPQTAVPVSISVGGAPAQNSVGQNHSAGPQPVTVVNSQTLLHHPSVMPQPSPLHTVVPGQVPSGTPVTVIQQTVPQSRMFGRVQSIPACTSTVSQGQQLITTSPQPMHTSSQQTAAGSQPQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQVVTIAGVPSPQPSRVGFQNIAPKPLPSQQVSPSVVQQPIQQPQQPAQQSVVIVSQPAQQGQAYAPAIHQIVLANPAALPAGQTVQLTGQPNITPSSSPSPVPPTNNQVPTAMSSSSTLQSQGPPPTVSQMLSVKRQQQQQHSPAAPAQQVQVQVQQPQQVQVQVQPQQPSAGVGQPAPNESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSAMPPAGGVQTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNAAQLIAPAGLSMSGAQASAGLQVQTLPAGQSACTTAPLPFKGDKIICQKEEEAKEATGLHVHERKIEVMENPSCRRGTTNTSNGDTSESELQVGSLLNGRKYSDSSLPPSNSGKLQSETSQCSLISNGPSLELGENGAPGKQNSEPVDMQDVKGDLKKALVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPVEPQGTSGATQQDTAKGDQLERVSNGPVLTLGGSPSTSSMQEAPSVATPPLSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTAPVIQGHQVIAVPHSGPRVTPSALSSDARSTNGTAECKTVKRPAEDNDRDTVPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKVAIESAAQQKQQHPPTYMQSVAPQNTPMPPSPAVQVQGQPSSSQPSPVSASSQHADPVRKPGQNFMCLWQSCK

IRESfinder result

IRESfinder score

0.586079757

IRES/non IRES

IRES

riboCIRC information

riboCIRC ID

NA

NA

Evidence

Peptide sequence:

NA

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