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mmu_circ4932438A13Rik_10927
Basic information of circular RNA
PanCircBase ID:
mmu_circ4932438A13Rik_10927
mm39_Chr. Position ID:
chr3|36994901|37096070|+
Gene name:
4932438A13Rik
Transcript:
ENSMUST00000057272.15
CircRNA type:
Exonic circular (circ)RNA
Exon/Intron count:
56
Exon/intron indexes:
25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,40,41,42,43,44,45,46,47,48,49,50,51,52,53,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69,70,71,72,73,74,75,76,77,78,79,80
Exon/intron offsets:
0,1430,2366,5495,6988,8389,9133,11365,13084,15886,16217,17935,18584,24122,24768,25089,26357,28393,32478,33415,34834,42616,46218,47317,49042,51924,54022,55562,57437,59263,61817,62996,64086,66232,67641,70192,70815,72127,73652,80694,81631,85337,87287,89148,89794,91612,92509,93800,95024,95904,97772,98527,99568,100249,100535,100951
Genomic length:
101169
Exon/intron sizes in nt:
1,20,28,12,51,25,98,38,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,00,000
Flanking exon/introns:
chr3:36992723-36994901|chr3:37096070-37098729
Splice length:
10927
Other database IDs:
Human Ortholog IDs:
Mature spliced Sequence:
TTGAGTTGTATTCCTGGGCCTTGTCCAACATCAGATGATTTAAAATACACCATGACTCGTTTAGCAATAGATGGATCTGATATTTATATTGTGGAACATGGTTGTGCTACAAATATAAAGATGGGTGCAGTTCGAATTGCAAACTGTAATCTTCACAATCAGTCAGTCGGGGAAGGAATAAGTGCTGCAATTCAGGACTTTCAAGTGAGACAGTATATTGAGCAATTAAATAACTGCAGGATTGGACTTCAGCCAGCAGTGCTGCGCAGAGCCTACTGGCTGGAAGCTGGATCAGCCAACTTAGGTCTTATTACAGTTGATATTGCATTAGCTGCCGATCATCATTCTAAACACGAGGCACAGAGACATTTCTTGGAAACTCATGATGCCAGAACTAAAAGATTGTGGTTTTTGTGGCCAGATGATACCTTGAAGAATAAGAGGTGCAGAAACAAGTGTGGCTGTCTCGGTGGCTGCAGATTTTTTGGTGGCACAGTAACTGGCCTAGATTTCTTTAAACTTGAAGAGTTGACACCTTCCAGTAGCTCTGCATTTTCAAGCACAAGTGCAGAGTCTGATATGTATTATGGCCAGTCTTTGCTACAGCCTGGAGAGTGGATCATTACTAAAGAAATCCCCAAGACTGTAGATGGAAATGTGAACAGTATGAAGAGGAAAGAATGGGAAAACAAATCAGTGGGAATAGAAGGAGAGAGAAAAACTCAGCACCTTAGTCTTCAGGTGCCCTTACGGTCTCACAGTTCATCCTCTTCCTCGGAGGAGAACAGCAGCTCCAGTGCTGCGCAGCCCTTACTGGCCGGCGAGAAGGAGAGCCCCTCCTCTGCTGCTGATGACCACTCCGTTCAGAAAGACTTGTTACATAGTGCCAGAAGAGATGATGGCCAAGCAAGTGTCCCTACAGAAATCTCAGGAACCAGTCCTGTGTCTCCTAACACCCAAGATAAGTCAGTAGGACAGTCTCCTCTCAGATCTCCTTTGAAGCGTCAAGCCTCCGTGTGCTCCACTCGACTTGGTAGTACTAAGAGTCTCACTGCTGCTTTTTATGGAGACAAACAGCCTGTTACAGTTGGAGTCCAATTTAGTAGTGATGTCTCTCGAAGTGATGAGAATGTCCTAGACTCTCCAAAACAGAGGAGAAGTTTTGGTTCATTCCCTTACACACCATCAGCTGATTCTAATTCATTTCATCAGTATCGGTCAATGGATTCCAGTATGTCAATGGCTGATAGTGAAGCCTACTTCTCTGCAGCTGAAGAATTTGAGCCCATTAGCAGTGATGAAGGCCCTGGAACTTATCCTGGTAGAAAAAAGAAGAAAAAGCAAATGCAACAGATTGATTACAGTAGGGGTTCCATATATCACAGTGTAGAAGGACCCCTTGCTGTCCATGGAGAAGGCATTACAGACCCTCGGACTCTCCCATTCAAAACTCATCCTTCCCAGGCTTCCTTTGTCTCTGCATTAGGTGGTGAAGATGAAGTCATAGAACATGTGTACATTGTAGAAGGTGAGAAAAGAGGAGAGAGTGAGCAGGTCACGTCTCAGCAGCCTGTGATGAGTTGCTATCACACTTACCTTACTCAGTTTCAGGTAATAAACTGGTCAGTTAAGCATCCTACCAACAAAAGAACCTCCAAGTCCTCATTGCATCGCCCCCTTGACCTAGATACACCAACCAGTGAAGAAAGTTCCTCATCCTTCGAACAGCTTTGTGTTCCAACATTCAAGGTCATCAAACAGGGACTTACTGCTAATTCTTTGTTAGATAGAGGGATGCAACTTTCAGGATCAACTTCAAACACCCCGTATACTCCACTGGACAAGAAAATTGTTGATACCACAGATGATGAAACATTAACAGAAGAGTGGACCCTAGATCAGCCTGTTGCTCAGACCAAGACCACAGCCATTGTGGAAGTGAAAGGAACTGTTGATGTTGTTCTCACTCCGCTGGTGGCCGAAGCCTTAGACAGATATATTGAAGCTATGGTTCACCGTGTGAGTACTCGACACCCAGCTGCGATTGTAGATGATCTTCATACTAAAGTCCTTAGAGAAGCTGTGCAAAATAGCAAGACTACCTTCTCAGAAAATTTATCCCCCAAGCAGGATATTCGAGGAACAAAAACTGAGCATCCTATGATAGGAACAACTAACCAGGGACAAATTCAGACAAATGTCACAACGAAGCAAGATAATGTGACAATTAAAGGACTACAGGCTAATGTGAGCATACCAAAGGTTAACTTATGCTTGTTGCAAGCTTCAGTGGAGGAGTCTCCAGCCACAGTTCCTAGTAGAAGTGTGACTCATGTGTCCCTGGTGGCTTTGTGCTTTGACAGAATTGCTACACAAGTTCGTATGAACAGAGGTGTGGTTGAAGAGACTGCAAATAATGTAGATGCTGGTAAAACATCAAATTTTGATAGATACGTTCATGCCAGCAAGATGCAGCCTCAGTCATCTGGGTCTCTTAGGTCAAATGCTGGAGCAGAGAAAGGCAAAGAGATTGCTGCCAAGTTAAATATCCATCGAGTCCATGGGCAACTTAGAGGTCTTGACACTACAGACATTGGGACCTGTGCCATCACTGCCATTCCCTTTGAAAAGTCCAAAGTTTTATTTACTCTTGAAGAATTAGATGAATTTACTTTTGTAGATGAGACAGATCAACAAGCTATCCCAGATGTAACACGGATAGGTCCCAGCCAAGAAAAATGGGGCTGGATAATGTTTGAATGTGGACTTGAAAATTTAACTATAAAAGGAGGAAGACAATCTGGTGCAGTTTTATATAACAGTTTTGGAATTATGGGTAAAAATAGTGTCACAGAAAGGGGTGGAGTGCTGACATCCAATAATTCTTCTGATTCTCCTACTGGCAGTGGCTACAATACTGATGTCTCTGATGATAACCTACCGTGTGACCGAACCAGTCCTTCCTCTGACATAAATGGAAACTCAGTGTCAGATGAGCAAGATGAAGGAGTTGAATCTGATGATTTGAAAAAAGATCTACCTCTAATGCCACCACCTCCAGATTCATGTAGCATGAAGTTGACTATTAAAGAGATTTGGTTTAGTTTTGCAGCTCCCACCAATGTGAGATCTCCTGCACATGCATTTTCTAGGCAGCTAAACCTCTTAAGCACTGCAACCCCAGCTGTTGGAGCATGGCTGGTTCCTATTGATCAACTCAAGTCATCCTTAAACAAATTAGAGACTGAGGGAACCTTGCGAATTTGTGCTGTTATGGGATGCATAATGACGGAAGCATTAGAGAATAAAAGTGTACATTTTCCTCTAAGAAGTAAATACAATAGACTTACAAAAGTTGCTCGCTTTCTTCAAGAAAATCCTTCTTGTTTATTATGTAATATTCTCCACCACTACCTGCACCAAGCAAATTACTCCATCATTGATGATGCCACGATGAGTGATGGTCTTCCTGCACTGGTAACTTTAAAGAAAGGATTGGTTGCTTTGGCACGGCAGTGGATGAAGTTCATTGTGGTAACACCTGCCTTTAAAGGAGTTAGCTTACACAGACCAGCTCAGCCCCTGAAACCTCCAGCTACTGTGGACCAGGAGCATGAAGAGGGACTTGGCCTGGATAATGGAGGTGGTCTACAAAGTGATACTAGTGCTGATGGTGCAGAATTTGAGTTTGATGCAGCCACAGTCAGTGAACATACAATGCTGCTAGAAGGAACAGCTAACCGACCACCCCCTGGGAGCTCTGGACCTGTCACTGGAGCTGAAATAATGAGGAAGCTTTCTAAAACTCACACCCATAGTGACTCTGCATTAAAAATAAAGGGCATTCACCCATATCATTCTCTGAGTTATACCAGTGGGGACACTGCTACTGATTCTCCAGTACATGTTGGACGTGCTGGGATGCCGGTAAAGGAGAGTCCAAGGAAGGAGAGCCTTCTCAGCTATCTGACTGGAAGCTTCCCAAGCCTGCACAACCTTCTGGAAGGCACTCCTCAGAGAAGTAGTGCAGCTGTGAAAAGTAGCTCCCTCACAAGAACAGGGAATACAGTAGCCACTGACATGCTGTCTGAACATCCTTTGTTATCTGAGCCATCATCTGTGAGTTTTTATAATTGGATGTCAAATGCTGTGGGAAATCGTGGAAGTGTGGTACAGGAATCTCCTGTTACAAAGTCAGGACATAACAGTCTTCCAACAGGAGTTGCACCCAATCTTCCTACAATCCCGTCAGCTTCAGATTTCAACACCGTCTTATCTAGTGACCAGAATACTCTGGATGGGACACATTCTCAGCACAGTACTAGTCAAGATGATGTGGCAGGTGTAGAAGAAGCAAACCAAGGGTTTCCTGCTGTTCAGCTAGCTGATGCACAGGTTGTTTTTAAACCTCTTCTGAGTCATACAGGGATCCAGTCACAGGACACAATGCCCCTTTGTTACCGGATGTACTTCGGAGAACACCTTTCATTTTCAGGAACTTTAGACTGCCTCAGAGCAGATATTGTAGATTCGGACACAGCTAAAGACAGGAAAGGAAAAAGAGCAAGAAGGCAAGGCCATGTGAACCTTCCCCCACTGGAGTTCAAGCCGGCATTAATGTTGGAAACCTTCAGCATCAGTGCTGTTGTAATGGAAAAGTCAGTGTGCACTCCGCAAAACTCCACCAGTGCCCTTTCCTTTCATGATCTCAACAAGCGCTATTACAACACCTTCCATTGCAACTTCACTATTTCCTGCCAGTCAATAAGTCAGCATGTGGATATGGCTCTGGTCCGTCTTATCCATCAATTCAGTACAATGATAGATGACATCAAAGCAACTCAGACAGACATTAAACTTAGTAGATACACAGCTGGATCAGCTTCCCCTACGCCTACCTTCAAAACCAGAAAACATCGGGATTTCCGTTCATCTGACTTCAGCCGCAGTTCGAGAGGGAGTCTCAATGGTGGCAACAGAGTAAATAATGCCAAGAACAAACGGGCCAACAATGAGAACAATAAAAAGGAATCCCGAAACAAAAACTCACTAGGAAGGTCTGAAAGAAGAACCTCAAAAGTATCTAGGAAAGGTTCAAAAGATGTAGTGGATCATATGACGATTCATATGGATGATTCCGATTCCATCACAGTGTCAGAGCAAAGTGAGCCTTCTGCTGAATGCTGGCAGAATATGTATAAATTGCTTAACTTCTATTCACTTATCTCAGATCCAACAGGGATATTGGAAAAGTCCTCAGAAACATTTGGACCAGCAGGTGTTCGGAGTCCTACAGAGCCAACATGTAGAGTTGTGTTTGAGAATGAACAAGACAACAACAGCTTGACTAAAACACAGAGGAAACGTAGTCTGGTAACCTCTGAACCTCAGCATGTAACATTAATTGTGTTTGGGATTGGCATGGTGAACCGCACACACCTAGAGGCAGATATTGGTGGTCTGACAATGGAATCAGAACTGAAGAGGATCCATGGCAGTTTCACCCTTAAGGAAAAAATGAAAGATGTTTTGCATCAAAAGATGACCGAGACCTGTGCTACTGCTCACATTGGTGGGGTTAATATTGTACTACTTGAAGGGATCACACCAAATATACAATTGGAAGATTTTCCTACATCTCCTACAAGTACAGCCAAACAAGAATTTCTAACTGTGGTCAAGTGTAGTATAGCCAAGTCCCAAGCCCTCTACAGTGCCCAGAGAGGGCTGAAGACAAACAACGCTGCAGTGTTCAAAGTAGGAGCTATCAGCATCAACATTCCTCAGCACCCTGCCACTTTACACAGCATGATGGTCCGCAGTTCTCACCAGCTGTCCAAGCAGATCTCAGACCTTATTAGACAGCCTTCCACAGCCCCACAGCCTATGAAAGAAGATATTGCAACCCCACTGCCTTCTGAAAAAACCCCAACAAGTGTTAATCAAACTCCTATTGAAACAAATGAATTTCCTCAACTCCCAGAAGGCTTAGAGAAGAAGCCTATTGTTCTCAAGTTCAGCGCTATGTTAGATGGCATAGCCATTGGAGCAGCACTCTTACCATCACTGAAGGCAGAGTACAAGATGGGGAGAATGAGAAGCCATGGGATGACAGGTGCACAGACAAGGTTTACATTTGAGTTACCAAATCACAGGTTGCGCTTTACTTCAAAAGTTTCTGCGACAGATATGTCAACTATCCCTCCTTCTGCAAGTCTTAACCTTCCGCCTGTTACCATGTCAGGGAAATACATTATGGAAGAACATGATAGTTACTCAGATCAAGTGTGGAGTATAGATGAACTGCCTTCTAAACAAGGGTACTATTTACAAGGGAATTATCTACGTTGTGTGGCAGAAGTTGGTTCCTTTGAACACAATCTCACAACAGATCTTCTAAACCACTTGGTGTTTGTACAGAAAGTGTTCATGAAGGAAGTGAATGAAGTAATACAGAAGGTGTCTGGTGGGGAGCAGCCTATCCCTCTCTGGAATGAACATGACGGAACAACAGATGGAGATAAGCCGAAAATTCTCCTCTACTCCCTGAATTTACAGTTTAAGGGTATTCAGGTAACAGCCACCACACCTTCAATGAGAGCTGTGAGATTTGAGACTGGATTGATTGAATTGGAACTTTCAAACCGACTTCAAACCAAAGCCTCACCAGGAAGCAGCAGCTATCTGAAATTATTTGGTAAATGCCAAGTGGACTTAAATCTGGCATTAGGGCAAATTGTCAAACATCAGGTTTATGAAGAAGCTGGTTCTGATTTTCATCAAGTTGCCTATTTTAAAACTAGAATTGGACTAAGGAACGCCCTTCGAGAGGAAATCAGTGGTTCTTCAGATAGGGAAGCTGTGCTTATTACTCTGAATAGACCAATTGTTTATGCACAACCTGTGGCTTTTGATAGAGCTGTTCTGTTTTGGCTGAATTATAAAGCTGCCTATGACAACTGGAATGAACAACGAATGGCTTTACATAAGGATATTCATATGGCTACAAAGGAAGTGGTAGACATGCTCCCTGGTATCCAGCAGACATCAGCCCAGGCCTTTGGGACTCTCTTCCTCCAGCTAACTGTGAATGATCTAGGAATTTGCCTCCCTATAACAAATACCGCACAGTCTAACCACACTGGAGACCTGGACACTGGCTCTGCTCTAGTGCTGACCATTGAAAGTACTCTCATCACTGCATGCTCCTCAGAGTCTCTGGTTAGCAAAGGCCATTTCAAGAACTTTTGTATCCGTTTTGCTGATGGCTTTGAGACATCATGGGATGACTGGAAACCAGAAATCCGTGGAGATCTAGTAATGAATGCTTGTGTAGTTCCAGATGGTACCTACGAGGTTTGTTCAAGGACTACAGGACAAGCTGCAGCTGAAAGTAGTAGTGCCGGAACCTGGACACTGAATGTATTGTGGAAAATGTGTGGGATTGATGTCCACATGGACCCTAACATTGGCAAAAGGCTTAATGCTCTGGGCAACACCCTTACAACACTGACAGGAGAGGAAGACATAGATGACATTGCTGACCTCAATTCAGTGAACATAGCTGACTTGTCAGATGAAGATGAAGTCGATACCATGTCTCCTACAATCCATACTGAAGCTGTAGATTATCGAAGACAAGGAACATCTTCTAGTCAGCCAGGAGAACTGAGAGGAAGGAAGATTATGAAGCGCTTAGTGGACATCAGAGAACTGAATGAACAGGCCAAAGTAATAGATGACCTTAAAAAATTGGGTGCAAGTGAAGGAACCATAAATCAGGAAATTCAGCGTTACCAGCAGTTGGAGTCTGTGGCTGTGAATGACATCCGAAGAGATGTCCGTAAGAAGTTACGGCGGTCCAGTATGCGAGCTGCTTCCCTCAAGGATAAGTGGGGTTTAGGTTACAAACCAAGTTACAGCCGATCGAAGAGCATTTCAGCTTCTGGAAGACCACCTCTTAAGAGAATGGAAAGAGCAAGTTCTCGAATAGGAGAAACTGATGAGCTCCCAGAAATCCGTGTGGATGCAGCATCTCCTGGACCCAGAGTAACCTTCAACATCCAGGATACATTTCCAGAGGAGACAGAACTGGATCTTTTGTCAGTAACAATTGAAGGTCCATCGCATTATTCATCAAATAGTGAAGGATCGTGTTCAGTGTTCAGCTCTCCCAAAACCACAGGCGGCTTTTCACCAAGTGTTCCTTTCCAGTCAGAAGATGGCCGAAGGGACGACAGTCTGTCTTCTACCAGTGAAGACTCTGAGAAGGATGAAAAGGATGAAGACCGTGAGAGGGAAAGATTCTATATTTACAGGAAACCCTCACATACCTCTCGGAAGAAAGCAACAGGCTTTGCTGCTGTTCATCAGCTACTTACTGAACGCTGGCCTACAACCCCAGTCAATCGAAGTCTTAGTGGCACAGCTACTGAGAGAAATATTGACTTTGAGCTTGATATACGAGTTGAAATTGACAGTGGAAAATGTGTCCTTCACCCCACTACCCTTCTGCAGGAGCATGATGACATAAGTTTAAGAAGGAGTTATGATAGAAGTTCTAGGAGTTTAGATCAAGATTCTCCTTCAAAAAAGAAAAAATTTCAAACGAATTATGCTTCAACTACCCATTTAATGACTGGCAAGAAAGTGCCATCCTCTCTACAGACAAAGCCCAGTGACTTAGAAACAACAGTATTTTACATTCCAGGAGTTGATGTCAAGCTGCATTACAATTCTAAGACACTAAAGACTGAATCACCTAACGCCTCCAGAGGATCGTCCTTGCCTAGAACCCTCTCCAAAGAGTCCAAGCTGTATGGTATGAAAGATAGCGCAGCATCTCCTTCTCCTTCTCCTTTACCTTGCACTGTGCAGAGCAAGACTAACACCTTACTTCCTCCCCAACCCCCACCTATTCCTTCAGCTAAAGGAAAAGGAAGTGGAGGAGTAAAAACTGCCAAGCTCTATGCCTGGGTAGCACTGCAGTCATTACCAGAAGAAATGGTTATTAGTCCTTGTCTATTGGACTTTCTTGAAAAGGCTCTGGAAACTATCCCAATTACACCAATCGAAAGGAATTATACAGCAGTCAGCTCACAAGATGAAGATATGGGACATTTTGACATCCCAGATCCTATGGAAGAATCAACAACATCCCTAGTGTCATCTTCAACATCTGCATACTCTTCCTTCCCTGTAGACGTTGTGGTTTATGTGCGAGTTCAGCCCTCACAGATCAAATTTAGCTGTTTGCCAGTATCAAGAGTAGAATGCATGCTGAAGCTACCATCTCTGGACTTGGTATTTTCTTCAAACCGAGGAGAACTGGAAACTTTGGGGACTACATACCCTGCAGAGACCGTGTCCCCTGGCAGTAATGCTCCTCAGACTGGAGCAAAGACCTCTGCTAGCAAAGCTGGAATGCCAGGCTCTTCAGGATTAGGCAGCCCACTTGGCCGAAGTCGACACAGCAGCAGCCAGTCGGATCTGACTGGGTCCAGCAGCAGCTCATCGGGCCTGAGCTTCACTGCATGCATGTCTGACTTCTCCCTGTATGTGTTTCACCCCTACGGTGCTGGGAAGCAGAAATCCACTGTTTCTGGTCTCACATCTGGATCAGGAGGACTAGGGAATGTGGATGAAGAACCCACTTCAGTCACTGGTCGAAAAGACTCACTAAGTATAAACCTCGAGTTTGTAAAAGTGAGCTTGTCTCGGATAAGGCGCTCAGGAGGCGCCTCATTTTTTGAAAGTCAATCTGTAAGCAAGTCTACAAGCAAAATGGACACTACATTAATCAATATATCTGCTGTTTGTGATATAGGGTCTGCTTCATTTAAGTACGATATGCGCCGACTCAGTGAAATCCTTGCATTTCCAAGAGCCTGGTATAGGAGAAGTATTGCAAGGCGCCTGTTCCTTGGAGACCAAACTGTAAACTTGCCAACATCTGGTCCAGGGACTCCTGATTCCATTGAAGGAGTGAGCCAGCACCTTTCTCCCGAATCATCAAGGAAAGCATACTGCAGGACCTGGGATCAGCCAAGCCAGTCAGCCTCCTTCACCCATATGCCGCAGTCACCCAATGTGTTCAATGAGCACATGACCAACAATACCATGTCACCAGGGACAGCAGCACAGAGCCTCAAGTCCCCAGCTTCCATAAGATCAAGGAGTGTTTCAGACTCTTCAGTCCCTCGAAGAGATTCAATTTCAAAAACATCAACTCCTGTTAACAAATCAAACAAAGCAGCAAGCCAGCAAGGGACTCCGTGGGAGACACTTGTTGTGTTCGCTATCAACCTTAAACAATTAAACGTCCAAATGAATATGAGCAATGTCATGGGAAATACAACTTGGACAACTAGTGGTTTGAAAAGCCAAGGCCGGCTTTCTGTAGGAAGCAACCGTGATCGAGAGATTAGCATGTCTGTTGGTCTGGGAAGGTCACAGTTAGATTCCAAAGGAGGAGTAGTTGGTGGGACCATTGATGTCAATGCTTTGGAGATGGTCGCTCATATTTCTGAACATCCAAATCAGCAACCAAATCACAAAATACAGATTACTATGGGTTCTACTGAGTCTCGAGTTGATTATATGGGCTCAAGCATCCTCATGGGTATCTTCAGTAATGCTGATCTTAAGCTTCAGGATGAATGGAAAGTAAATTTGTATAACGCCTTGGATTCAAGCATGACTGATAAAAGTGAGATTTTTGTGCATGGAGATTTGAAATGGGATATTTTTCAAGTAATGATATCAAGATCAACTACACCAGACTTGATAAAAATAGGAATGAAGCTCCAAGAGTTTTTCACACAACAGTTTGATACTAGTAAGCGAGCTCTGTCAACCTGGGGACCTGTTCCTTATCTGCCGCCCAAGACAATGACCAACAACCTGGAAAAGAATTCACAAGAACAAT
Divergent primers for circular RNA PCR
Primer Set-1
Forward primer
Tm
Reverse primer
Tm
Product size
AAGCGAGCTCTGTCAACCTG
60.32
TGCTAAACGAGTCATGGTGT
57.17
154
Primer Set-2
Forward primer
Tm
Reverse primer
Tm
Product size
AAGCGAGCTCTGTCAACCTG
60.32
TTGCTAAACGAGTCATGGTGT
57.88
155
PCR template sequence:
TTTGATACTAGTAAGCGAGCTCTGTCAACCTGGGGACCTGTTCCTTATCTGCCGCCCAAGACAATGACCAACAACCTGGAAAAGAATTCACAAGAACAATTTGAGTTGTATTCCTGGGCCTTGTCCAACATCAGATGATTTAAAATACACCATGACTCGTTTAGCAATAGATGGATCTGATATTTATATTGTGGAACATG
Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.
miRNAs associated with circular RNAs
No of miRNAs
77
Interacting miRNAs (#binding sites)
mmu-miR-137-3p(1), mmu-miR-9-5p(1), mmu-miR-23b-3p(1), mmu-miR-15a-5p(1), mmu-miR-1a-3p(1), mmu-miR-199a-5p(1), mmu-miR-7b-5p(1), mmu-miR-206-3p(1), mmu-miR-181a-5p(1), mmu-miR-103-3p(1), mmu-miR-221-3p(1), mmu-miR-135a-5p(1), mmu-miR-34c-5p(1), mmu-miR-34a-5p(1), mmu-miR-26a-5p(1), mmu-miR-122-5p(1), mmu-miR-211-5p(1), mmu-miR-204-5p(1), mmu-miR-322-5p(1), mmu-miR-15b-5p(1), mmu-miR-146a-5p(1), mmu-miR-130a-3p(1), mmu-miR-152-3p(1), mmu-miR-148b-3p(1), mmu-miR-148a-3p(1), mmu-miR-298-5p(1), mmu-miR-7a-5p(1), mmu-miR-196a-5p(1), mmu-miR-203-3p(1), mmu-miR-320-3p(1), mmu-miR-324-5p(1), mmu-miR-326-3p(1), mmu-miR-23a-3p(1), mmu-miR-181b-5p(1), mmu-miR-495-3p(1), mmu-miR-24-3p(1), mmu-miR-149-5p(1), mmu-miR-434-3p(1), mmu-miR-433-5p(1), mmu-miR-191-5p(1), mmu-miR-26b-5p(1), mmu-miR-29b-1-5p(1), mmu-miR-382-3p(1), mmu-miR-22-3p(1), mmu-miR-127-5p(1), mmu-miR-411-3p(1), mmu-miR-130b-3p(1), mmu-miR-301b-3p(1), mmu-miR-721(1), mmu-miR-194-5p(1), mmu-miR-218-5p(1), mmu-miR-382-5p(1), mmu-miR-370-3p(1), mmu-miR-183-5p(1), mmu-miR-107-3p(1), mmu-miR-224-5p(1), mmu-miR-499-5p(1), mmu-miR-680(1), mmu-miR-384-3p(1), mmu-miR-29b-2-5p(1), mmu-miR-342-3p(1), mmu-miR-207(1), mmu-miR-673-5p(1), mmu-miR-5101(1), mmu-miR-369-3p(1), mmu-miR-335-3p(1), mmu-miR-669d-5p(1), mmu-miR-3087-3p(1), mmu-miR-452-3p(1), mmu-miR-350-3p(1), mmu-miR-670-5p(1), mmu-miR-1904(1), mmu-miR-146b-5p(1), mmu-miR-339-3p(1), mmu-miR-338-3p(1), mmu-miR-181d-5p(1), mmu-miR-7a-2-3p(1)
siRNAs for circular RNA silencing
Junction sequence
TCACAAGAACAATTTGAGTTGTATTC
siRNA sets
AATACAACTCAAATTGTTC, ATACAACTCAAATTGTTCT, AACTCAAATTGTTCTTGTG
Protein-coding potential of circular RNAs
CPAT analysis
CPAT ORF ID
CPAT Fickett
CPAT Hexamer
Coding probabilty
ORF length
CIRC4932438A13RIK_10927_ORF_1
0.9006
0.067363449
1
10914
ORF sequence:
ATGACTCGTTTAGCAATAGATGGATCTGATATTTATATTGTGGAACATGGTTGTGCTACAAATATAAAGATGGGTGCAGTTCGAATTGCAAACTGTAATCTTCACAATCAGTCAGTCGGGGAAGGAATAAGTGCTGCAATTCAGGACTTTCAAGTGAGACAGTATATTGAGCAATTAAATAACTGCAGGATTGGACTTCAGCCAGCAGTGCTGCGCAGAGCCTACTGGCTGGAAGCTGGATCAGCCAACTTAGGTCTTATTACAGTTGATATTGCATTAGCTGCCGATCATCATTCTAAACACGAGGCACAGAGACATTTCTTGGAAACTCATGATGCCAGAACTAAAAGATTGTGGTTTTTGTGGCCAGATGATACCTTGAAGAATAAGAGGTGCAGAAACAAGTGTGGCTGTCTCGGTGGCTGCAGATTTTTTGGTGGCACAGTAACTGGCCTAGATTTCTTTAAACTTGAAGAGTTGACACCTTCCAGTAGCTCTGCATTTTCAAGCACAAGTGCAGAGTCTGATATGTATTATGGCCAGTCTTTGCTACAGCCTGGAGAGTGGATCATTACTAAAGAAATCCCCAAGACTGTAGATGGAAATGTGAACAGTATGAAGAGGAAAGAATGGGAAAACAAATCAGTGGGAATAGAAGGAGAGAGAAAAACTCAGCACCTTAGTCTTCAGGTGCCCTTACGGTCTCACAGTTCATCCTCTTCCTCGGAGGAGAACAGCAGCTCCAGTGCTGCGCAGCCCTTACTGGCCGGCGAGAAGGAGAGCCCCTCCTCTGCTGCTGATGACCACTCCGTTCAGAAAGACTTGTTACATAGTGCCAGAAGAGATGATGGCCAAGCAAGTGTCCCTACAGAAATCTCAGGAACCAGTCCTGTGTCTCCTAACACCCAAGATAAGTCAGTAGGACAGTCTCCTCTCAGATCTCCTTTGAAGCGTCAAGCCTCCGTGTGCTCCACTCGACTTGGTAGTACTAAGAGTCTCACTGCTGCTTTTTATGGAGACAAACAGCCTGTTACAGTTGGAGTCCAATTTAGTAGTGATGTCTCTCGAAGTGATGAGAATGTCCTAGACTCTCCAAAACAGAGGAGAAGTTTTGGTTCATTCCCTTACACACCATCAGCTGATTCTAATTCATTTCATCAGTATCGGTCAATGGATTCCAGTATGTCAATGGCTGATAGTGAAGCCTACTTCTCTGCAGCTGAAGAATTTGAGCCCATTAGCAGTGATGAAGGCCCTGGAACTTATCCTGGTAGAAAAAAGAAGAAAAAGCAAATGCAACAGATTGATTACAGTAGGGGTTCCATATATCACAGTGTAGAAGGACCCCTTGCTGTCCATGGAGAAGGCATTACAGACCCTCGGACTCTCCCATTCAAAACTCATCCTTCCCAGGCTTCCTTTGTCTCTGCATTAGGTGGTGAAGATGAAGTCATAGAACATGTGTACATTGTAGAAGGTGAGAAAAGAGGAGAGAGTGAGCAGGTCACGTCTCAGCAGCCTGTGATGAGTTGCTATCACACTTACCTTACTCAGTTTCAGGTAATAAACTGGTCAGTTAAGCATCCTACCAACAAAAGAACCTCCAAGTCCTCATTGCATCGCCCCCTTGACCTAGATACACCAACCAGTGAAGAAAGTTCCTCATCCTTCGAACAGCTTTGTGTTCCAACATTCAAGGTCATCAAACAGGGACTTACTGCTAATTCTTTGTTAGATAGAGGGATGCAACTTTCAGGATCAACTTCAAACACCCCGTATACTCCACTGGACAAGAAAATTGTTGATACCACAGATGATGAAACATTAACAGAAGAGTGGACCCTAGATCAGCCTGTTGCTCAGACCAAGACCACAGCCATTGTGGAAGTGAAAGGAACTGTTGATGTTGTTCTCACTCCGCTGGTGGCCGAAGCCTTAGACAGATATATTGAAGCTATGGTTCACCGTGTGAGTACTCGACACCCAGCTGCGATTGTAGATGATCTTCATACTAAAGTCCTTAGAGAAGCTGTGCAAAATAGCAAGACTACCTTCTCAGAAAATTTATCCCCCAAGCAGGATATTCGAGGAACAAAAACTGAGCATCCTATGATAGGAACAACTAACCAGGGACAAATTCAGACAAATGTCACAACGAAGCAAGATAATGTGACAATTAAAGGACTACAGGCTAATGTGAGCATACCAAAGGTTAACTTATGCTTGTTGCAAGCTTCAGTGGAGGAGTCTCCAGCCACAGTTCCTAGTAGAAGTGTGACTCATGTGTCCCTGGTGGCTTTGTGCTTTGACAGAATTGCTACACAAGTTCGTATGAACAGAGGTGTGGTTGAAGAGACTGCAAATAATGTAGATGCTGGTAAAACATCAAATTTTGATAGATACGTTCATGCCAGCAAGATGCAGCCTCAGTCATCTGGGTCTCTTAGGTCAAATGCTGGAGCAGAGAAAGGCAAAGAGATTGCTGCCAAGTTAAATATCCATCGAGTCCATGGGCAACTTAGAGGTCTTGACACTACAGACATTGGGACCTGTGCCATCACTGCCATTCCCTTTGAAAAGTCCAAAGTTTTATTTACTCTTGAAGAATTAGATGAATTTACTTTTGTAGATGAGACAGATCAACAAGCTATCCCAGATGTAACACGGATAGGTCCCAGCCAAGAAAAATGGGGCTGGATAATGTTTGAATGTGGACTTGAAAATTTAACTATAAAAGGAGGAAGACAATCTGGTGCAGTTTTATATAACAGTTTTGGAATTATGGGTAAAAATAGTGTCACAGAAAGGGGTGGAGTGCTGACATCCAATAATTCTTCTGATTCTCCTACTGGCAGTGGCTACAATACTGATGTCTCTGATGATAACCTACCGTGTGACCGAACCAGTCCTTCCTCTGACATAAATGGAAACTCAGTGTCAGATGAGCAAGATGAAGGAGTTGAATCTGATGATTTGAAAAAAGATCTACCTCTAATGCCACCACCTCCAGATTCATGTAGCATGAAGTTGACTATTAAAGAGATTTGGTTTAGTTTTGCAGCTCCCACCAATGTGAGATCTCCTGCACATGCATTTTCTAGGCAGCTAAACCTCTTAAGCACTGCAACCCCAGCTGTTGGAGCATGGCTGGTTCCTATTGATCAACTCAAGTCATCCTTAAACAAATTAGAGACTGAGGGAACCTTGCGAATTTGTGCTGTTATGGGATGCATAATGACGGAAGCATTAGAGAATAAAAGTGTACATTTTCCTCTAAGAAGTAAATACAATAGACTTACAAAAGTTGCTCGCTTTCTTCAAGAAAATCCTTCTTGTTTATTATGTAATATTCTCCACCACTACCTGCACCAAGCAAATTACTCCATCATTGATGATGCCACGATGAGTGATGGTCTTCCTGCACTGGTAACTTTAAAGAAAGGATTGGTTGCTTTGGCACGGCAGTGGATGAAGTTCATTGTGGTAACACCTGCCTTTAAAGGAGTTAGCTTACACAGACCAGCTCAGCCCCTGAAACCTCCAGCTACTGTGGACCAGGAGCATGAAGAGGGACTTGGCCTGGATAATGGAGGTGGTCTACAAAGTGATACTAGTGCTGATGGTGCAGAATTTGAGTTTGATGCAGCCACAGTCAGTGAACATACAATGCTGCTAGAAGGAACAGCTAACCGACCACCCCCTGGGAGCTCTGGACCTGTCACTGGAGCTGAAATAATGAGGAAGCTTTCTAAAACTCACACCCATAGTGACTCTGCATTAAAAATAAAGGGCATTCACCCATATCATTCTCTGAGTTATACCAGTGGGGACACTGCTACTGATTCTCCAGTACATGTTGGACGTGCTGGGATGCCGGTAAAGGAGAGTCCAAGGAAGGAGAGCCTTCTCAGCTATCTGACTGGAAGCTTCCCAAGCCTGCACAACCTTCTGGAAGGCACTCCTCAGAGAAGTAGTGCAGCTGTGAAAAGTAGCTCCCTCACAAGAACAGGGAATACAGTAGCCACTGACATGCTGTCTGAACATCCTTTGTTATCTGAGCCATCATCTGTGAGTTTTTATAATTGGATGTCAAATGCTGTGGGAAATCGTGGAAGTGTGGTACAGGAATCTCCTGTTACAAAGTCAGGACATAACAGTCTTCCAACAGGAGTTGCACCCAATCTTCCTACAATCCCGTCAGCTTCAGATTTCAACACCGTCTTATCTAGTGACCAGAATACTCTGGATGGGACACATTCTCAGCACAGTACTAGTCAAGATGATGTGGCAGGTGTAGAAGAAGCAAACCAAGGGTTTCCTGCTGTTCAGCTAGCTGATGCACAGGTTGTTTTTAAACCTCTTCTGAGTCATACAGGGATCCAGTCACAGGACACAATGCCCCTTTGTTACCGGATGTACTTCGGAGAACACCTTTCATTTTCAGGAACTTTAGACTGCCTCAGAGCAGATATTGTAGATTCGGACACAGCTAAAGACAGGAAAGGAAAAAGAGCAAGAAGGCAAGGCCATGTGAACCTTCCCCCACTGGAGTTCAAGCCGGCATTAATGTTGGAAACCTTCAGCATCAGTGCTGTTGTAATGGAAAAGTCAGTGTGCACTCCGCAAAACTCCACCAGTGCCCTTTCCTTTCATGATCTCAACAAGCGCTATTACAACACCTTCCATTGCAACTTCACTATTTCCTGCCAGTCAATAAGTCAGCATGTGGATATGGCTCTGGTCCGTCTTATCCATCAATTCAGTACAATGATAGATGACATCAAAGCAACTCAGACAGACATTAAACTTAGTAGATACACAGCTGGATCAGCTTCCCCTACGCCTACCTTCAAAACCAGAAAACATCGGGATTTCCGTTCATCTGACTTCAGCCGCAGTTCGAGAGGGAGTCTCAATGGTGGCAACAGAGTAAATAATGCCAAGAACAAACGGGCCAACAATGAGAACAATAAAAAGGAATCCCGAAACAAAAACTCACTAGGAAGGTCTGAAAGAAGAACCTCAAAAGTATCTAGGAAAGGTTCAAAAGATGTAGTGGATCATATGACGATTCATATGGATGATTCCGATTCCATCACAGTGTCAGAGCAAAGTGAGCCTTCTGCTGAATGCTGGCAGAATATGTATAAATTGCTTAACTTCTATTCACTTATCTCAGATCCAACAGGGATATTGGAAAAGTCCTCAGAAACATTTGGACCAGCAGGTGTTCGGAGTCCTACAGAGCCAACATGTAGAGTTGTGTTTGAGAATGAACAAGACAACAACAGCTTGACTAAAACACAGAGGAAACGTAGTCTGGTAACCTCTGAACCTCAGCATGTAACATTAATTGTGTTTGGGATTGGCATGGTGAACCGCACACACCTAGAGGCAGATATTGGTGGTCTGACAATGGAATCAGAACTGAAGAGGATCCATGGCAGTTTCACCCTTAAGGAAAAAATGAAAGATGTTTTGCATCAAAAGATGACCGAGACCTGTGCTACTGCTCACATTGGTGGGGTTAATATTGTACTACTTGAAGGGATCACACCAAATATACAATTGGAAGATTTTCCTACATCTCCTACAAGTACAGCCAAACAAGAATTTCTAACTGTGGTCAAGTGTAGTATAGCCAAGTCCCAAGCCCTCTACAGTGCCCAGAGAGGGCTGAAGACAAACAACGCTGCAGTGTTCAAAGTAGGAGCTATCAGCATCAACATTCCTCAGCACCCTGCCACTTTACACAGCATGATGGTCCGCAGTTCTCACCAGCTGTCCAAGCAGATCTCAGACCTTATTAGACAGCCTTCCACAGCCCCACAGCCTATGAAAGAAGATATTGCAACCCCACTGCCTTCTGAAAAAACCCCAACAAGTGTTAATCAAACTCCTATTGAAACAAATGAATTTCCTCAACTCCCAGAAGGCTTAGAGAAGAAGCCTATTGTTCTCAAGTTCAGCGCTATGTTAGATGGCATAGCCATTGGAGCAGCACTCTTACCATCACTGAAGGCAGAGTACAAGATGGGGAGAATGAGAAGCCATGGGATGACAGGTGCACAGACAAGGTTTACATTTGAGTTACCAAATCACAGGTTGCGCTTTACTTCAAAAGTTTCTGCGACAGATATGTCAACTATCCCTCCTTCTGCAAGTCTTAACCTTCCGCCTGTTACCATGTCAGGGAAATACATTATGGAAGAACATGATAGTTACTCAGATCAAGTGTGGAGTATAGATGAACTGCCTTCTAAACAAGGGTACTATTTACAAGGGAATTATCTACGTTGTGTGGCAGAAGTTGGTTCCTTTGAACACAATCTCACAACAGATCTTCTAAACCACTTGGTGTTTGTACAGAAAGTGTTCATGAAGGAAGTGAATGAAGTAATACAGAAGGTGTCTGGTGGGGAGCAGCCTATCCCTCTCTGGAATGAACATGACGGAACAACAGATGGAGATAAGCCGAAAATTCTCCTCTACTCCCTGAATTTACAGTTTAAGGGTATTCAGGTAACAGCCACCACACCTTCAATGAGAGCTGTGAGATTTGAGACTGGATTGATTGAATTGGAACTTTCAAACCGACTTCAAACCAAAGCCTCACCAGGAAGCAGCAGCTATCTGAAATTATTTGGTAAATGCCAAGTGGACTTAAATCTGGCATTAGGGCAAATTGTCAAACATCAGGTTTATGAAGAAGCTGGTTCTGATTTTCATCAAGTTGCCTATTTTAAAACTAGAATTGGACTAAGGAACGCCCTTCGAGAGGAAATCAGTGGTTCTTCAGATAGGGAAGCTGTGCTTATTACTCTGAATAGACCAATTGTTTATGCACAACCTGTGGCTTTTGATAGAGCTGTTCTGTTTTGGCTGAATTATAAAGCTGCCTATGACAACTGGAATGAACAACGAATGGCTTTACATAAGGATATTCATATGGCTACAAAGGAAGTGGTAGACATGCTCCCTGGTATCCAGCAGACATCAGCCCAGGCCTTTGGGACTCTCTTCCTCCAGCTAACTGTGAATGATCTAGGAATTTGCCTCCCTATAACAAATACCGCACAGTCTAACCACACTGGAGACCTGGACACTGGCTCTGCTCTAGTGCTGACCATTGAAAGTACTCTCATCACTGCATGCTCCTCAGAGTCTCTGGTTAGCAAAGGCCATTTCAAGAACTTTTGTATCCGTTTTGCTGATGGCTTTGAGACATCATGGGATGACTGGAAACCAGAAATCCGTGGAGATCTAGTAATGAATGCTTGTGTAGTTCCAGATGGTACCTACGAGGTTTGTTCAAGGACTACAGGACAAGCTGCAGCTGAAAGTAGTAGTGCCGGAACCTGGACACTGAATGTATTGTGGAAAATGTGTGGGATTGATGTCCACATGGACCCTAACATTGGCAAAAGGCTTAATGCTCTGGGCAACACCCTTACAACACTGACAGGAGAGGAAGACATAGATGACATTGCTGACCTCAATTCAGTGAACATAGCTGACTTGTCAGATGAAGATGAAGTCGATACCATGTCTCCTACAATCCATACTGAAGCTGTAGATTATCGAAGACAAGGAACATCTTCTAGTCAGCCAGGAGAACTGAGAGGAAGGAAGATTATGAAGCGCTTAGTGGACATCAGAGAACTGAATGAACAGGCCAAAGTAATAGATGACCTTAAAAAATTGGGTGCAAGTGAAGGAACCATAAATCAGGAAATTCAGCGTTACCAGCAGTTGGAGTCTGTGGCTGTGAATGACATCCGAAGAGATGTCCGTAAGAAGTTACGGCGGTCCAGTATGCGAGCTGCTTCCCTCAAGGATAAGTGGGGTTTAGGTTACAAACCAAGTTACAGCCGATCGAAGAGCATTTCAGCTTCTGGAAGACCACCTCTTAAGAGAATGGAAAGAGCAAGTTCTCGAATAGGAGAAACTGATGAGCTCCCAGAAATCCGTGTGGATGCAGCATCTCCTGGACCCAGAGTAACCTTCAACATCCAGGATACATTTCCAGAGGAGACAGAACTGGATCTTTTGTCAGTAACAATTGAAGGTCCATCGCATTATTCATCAAATAGTGAAGGATCGTGTTCAGTGTTCAGCTCTCCCAAAACCACAGGCGGCTTTTCACCAAGTGTTCCTTTCCAGTCAGAAGATGGCCGAAGGGACGACAGTCTGTCTTCTACCAGTGAAGACTCTGAGAAGGATGAAAAGGATGAAGACCGTGAGAGGGAAAGATTCTATATTTACAGGAAACCCTCACATACCTCTCGGAAGAAAGCAACAGGCTTTGCTGCTGTTCATCAGCTACTTACTGAACGCTGGCCTACAACCCCAGTCAATCGAAGTCTTAGTGGCACAGCTACTGAGAGAAATATTGACTTTGAGCTTGATATACGAGTTGAAATTGACAGTGGAAAATGTGTCCTTCACCCCACTACCCTTCTGCAGGAGCATGATGACATAAGTTTAAGAAGGAGTTATGATAGAAGTTCTAGGAGTTTAGATCAAGATTCTCCTTCAAAAAAGAAAAAATTTCAAACGAATTATGCTTCAACTACCCATTTAATGACTGGCAAGAAAGTGCCATCCTCTCTACAGACAAAGCCCAGTGACTTAGAAACAACAGTATTTTACATTCCAGGAGTTGATGTCAAGCTGCATTACAATTCTAAGACACTAAAGACTGAATCACCTAACGCCTCCAGAGGATCGTCCTTGCCTAGAACCCTCTCCAAAGAGTCCAAGCTGTATGGTATGAAAGATAGCGCAGCATCTCCTTCTCCTTCTCCTTTACCTTGCACTGTGCAGAGCAAGACTAACACCTTACTTCCTCCCCAACCCCCACCTATTCCTTCAGCTAAAGGAAAAGGAAGTGGAGGAGTAAAAACTGCCAAGCTCTATGCCTGGGTAGCACTGCAGTCATTACCAGAAGAAATGGTTATTAGTCCTTGTCTATTGGACTTTCTTGAAAAGGCTCTGGAAACTATCCCAATTACACCAATCGAAAGGAATTATACAGCAGTCAGCTCACAAGATGAAGATATGGGACATTTTGACATCCCAGATCCTATGGAAGAATCAACAACATCCCTAGTGTCATCTTCAACATCTGCATACTCTTCCTTCCCTGTAGACGTTGTGGTTTATGTGCGAGTTCAGCCCTCACAGATCAAATTTAGCTGTTTGCCAGTATCAAGAGTAGAATGCATGCTGAAGCTACCATCTCTGGACTTGGTATTTTCTTCAAACCGAGGAGAACTGGAAACTTTGGGGACTACATACCCTGCAGAGACCGTGTCCCCTGGCAGTAATGCTCCTCAGACTGGAGCAAAGACCTCTGCTAGCAAAGCTGGAATGCCAGGCTCTTCAGGATTAGGCAGCCCACTTGGCCGAAGTCGACACAGCAGCAGCCAGTCGGATCTGACTGGGTCCAGCAGCAGCTCATCGGGCCTGAGCTTCACTGCATGCATGTCTGACTTCTCCCTGTATGTGTTTCACCCCTACGGTGCTGGGAAGCAGAAATCCACTGTTTCTGGTCTCACATCTGGATCAGGAGGACTAGGGAATGTGGATGAAGAACCCACTTCAGTCACTGGTCGAAAAGACTCACTAAGTATAAACCTCGAGTTTGTAAAAGTGAGCTTGTCTCGGATAAGGCGCTCAGGAGGCGCCTCATTTTTTGAAAGTCAATCTGTAAGCAAGTCTACAAGCAAAATGGACACTACATTAATCAATATATCTGCTGTTTGTGATATAGGGTCTGCTTCATTTAAGTACGATATGCGCCGACTCAGTGAAATCCTTGCATTTCCAAGAGCCTGGTATAGGAGAAGTATTGCAAGGCGCCTGTTCCTTGGAGACCAAACTGTAAACTTGCCAACATCTGGTCCAGGGACTCCTGATTCCATTGAAGGAGTGAGCCAGCACCTTTCTCCCGAATCATCAAGGAAAGCATACTGCAGGACCTGGGATCAGCCAAGCCAGTCAGCCTCCTTCACCCATATGCCGCAGTCACCCAATGTGTTCAATGAGCACATGACCAACAATACCATGTCACCAGGGACAGCAGCACAGAGCCTCAAGTCCCCAGCTTCCATAAGATCAAGGAGTGTTTCAGACTCTTCAGTCCCTCGAAGAGATTCAATTTCAAAAACATCAACTCCTGTTAACAAATCAAACAAAGCAGCAAGCCAGCAAGGGACTCCGTGGGAGACACTTGTTGTGTTCGCTATCAACCTTAAACAATTAAACGTCCAAATGAATATGAGCAATGTCATGGGAAATACAACTTGGACAACTAGTGGTTTGAAAAGCCAAGGCCGGCTTTCTGTAGGAAGCAACCGTGATCGAGAGATTAGCATGTCTGTTGGTCTGGGAAGGTCACAGTTAGATTCCAAAGGAGGAGTAGTTGGTGGGACCATTGATGTCAATGCTTTGGAGATGGTCGCTCATATTTCTGAACATCCAAATCAGCAACCAAATCACAAAATACAGATTACTATGGGTTCTACTGAGTCTCGAGTTGATTATATGGGCTCAAGCATCCTCATGGGTATCTTCAGTAATGCTGATCTTAAGCTTCAGGATGAATGGAAAGTAAATTTGTATAACGCCTTGGATTCAAGCATGACTGATAAAAGTGAGATTTTTGTGCATGGAGATTTGAAATGGGATATTTTTCAAGTAATGATATCAAGATCAACTACACCAGACTTGATAAAAATAGGAATGAAGCTCCAAGAGTTTTTCACACAACAGTTTGATACTAGTAAGCGAGCTCTGTCAACCTGGGGACCTGTTCCTTATCTGCCGCCCAAGACAATGACCAACAACCTGGAAAAGAATTCACAAGAACAATTTGAGTTGTATTCCTGGGCCTTGTCCAACATCAGATGA
Peptide sequence:
MTRLAIDGSDIYIVEHGCATNIKMGAVRIANCNLHNQSVGEGISAAIQDFQVRQYIEQLNNCRIGLQPAVLRRAYWLEAGSANLGLITVDIALAADHHSKHEAQRHFLETHDARTKRLWFLWPDDTLKNKRCRNKCGCLGGCRFFGGTVTGLDFFKLEELTPSSSSAFSSTSAESDMYYGQSLLQPGEWIITKEIPKTVDGNVNSMKRKEWENKSVGIEGERKTQHLSLQVPLRSHSSSSSSEENSSSSAAQPLLAGEKESPSSAADDHSVQKDLLHSARRDDGQASVPTEISGTSPVSPNTQDKSVGQSPLRSPLKRQASVCSTRLGSTKSLTAAFYGDKQPVTVGVQFSSDVSRSDENVLDSPKQRRSFGSFPYTPSADSNSFHQYRSMDSSMSMADSEAYFSAAEEFEPISSDEGPGTYPGRKKKKKQMQQIDYSRGSIYHSVEGPLAVHGEGITDPRTLPFKTHPSQASFVSALGGEDEVIEHVYIVEGEKRGESEQVTSQQPVMSCYHTYLTQFQVINWSVKHPTNKRTSKSSLHRPLDLDTPTSEESSSSFEQLCVPTFKVIKQGLTANSLLDRGMQLSGSTSNTPYTPLDKKIVDTTDDETLTEEWTLDQPVAQTKTTAIVEVKGTVDVVLTPLVAEALDRYIEAMVHRVSTRHPAAIVDDLHTKVLREAVQNSKTTFSENLSPKQDIRGTKTEHPMIGTTNQGQIQTNVTTKQDNVTIKGLQANVSIPKVNLCLLQASVEESPATVPSRSVTHVSLVALCFDRIATQVRMNRGVVEETANNVDAGKTSNFDRYVHASKMQPQSSGSLRSNAGAEKGKEIAAKLNIHRVHGQLRGLDTTDIGTCAITAIPFEKSKVLFTLEELDEFTFVDETDQQAIPDVTRIGPSQEKWGWIMFECGLENLTIKGGRQSGAVLYNSFGIMGKNSVTERGGVLTSNNSSDSPTGSGYNTDVSDDNLPCDRTSPSSDINGNSVSDEQDEGVESDDLKKDLPLMPPPPDSCSMKLTIKEIWFSFAAPTNVRSPAHAFSRQLNLLSTATPAVGAWLVPIDQLKSSLNKLETEGTLRICAVMGCIMTEALENKSVHFPLRSKYNRLTKVARFLQENPSCLLCNILHHYLHQANYSIIDDATMSDGLPALVTLKKGLVALARQWMKFIVVTPAFKGVSLHRPAQPLKPPATVDQEHEEGLGLDNGGGLQSDTSADGAEFEFDAATVSEHTMLLEGTANRPPPGSSGPVTGAEIMRKLSKTHTHSDSALKIKGIHPYHSLSYTSGDTATDSPVHVGRAGMPVKESPRKESLLSYLTGSFPSLHNLLEGTPQRSSAAVKSSSLTRTGNTVATDMLSEHPLLSEPSSVSFYNWMSNAVGNRGSVVQESPVTKSGHNSLPTGVAPNLPTIPSASDFNTVLSSDQNTLDGTHSQHSTSQDDVAGVEEANQGFPAVQLADAQVVFKPLLSHTGIQSQDTMPLCYRMYFGEHLSFSGTLDCLRADIVDSDTAKDRKGKRARRQGHVNLPPLEFKPALMLETFSISAVVMEKSVCTPQNSTSALSFHDLNKRYYNTFHCNFTISCQSISQHVDMALVRLIHQFSTMIDDIKATQTDIKLSRYTAGSASPTPTFKTRKHRDFRSSDFSRSSRGSLNGGNRVNNAKNKRANNENNKKESRNKNSLGRSERRTSKVSRKGSKDVVDHMTIHMDDSDSITVSEQSEPSAECWQNMYKLLNFYSLISDPTGILEKSSETFGPAGVRSPTEPTCRVVFENEQDNNSLTKTQRKRSLVTSEPQHVTLIVFGIGMVNRTHLEADIGGLTMESELKRIHGSFTLKEKMKDVLHQKMTETCATAHIGGVNIVLLEGITPNIQLEDFPTSPTSTAKQEFLTVVKCSIAKSQALYSAQRGLKTNNAAVFKVGAISINIPQHPATLHSMMVRSSHQLSKQISDLIRQPSTAPQPMKEDIATPLPSEKTPTSVNQTPIETNEFPQLPEGLEKKPIVLKFSAMLDGIAIGAALLPSLKAEYKMGRMRSHGMTGAQTRFTFELPNHRLRFTSKVSATDMSTIPPSASLNLPPVTMSGKYIMEEHDSYSDQVWSIDELPSKQGYYLQGNYLRCVAEVGSFEHNLTTDLLNHLVFVQKVFMKEVNEVIQKVSGGEQPIPLWNEHDGTTDGDKPKILLYSLNLQFKGIQVTATTPSMRAVRFETGLIELELSNRLQTKASPGSSSYLKLFGKCQVDLNLALGQIVKHQVYEEAGSDFHQVAYFKTRIGLRNALREEISGSSDREAVLITLNRPIVYAQPVAFDRAVLFWLNYKAAYDNWNEQRMALHKDIHMATKEVVDMLPGIQQTSAQAFGTLFLQLTVNDLGICLPITNTAQSNHTGDLDTGSALVLTIESTLITACSSESLVSKGHFKNFCIRFADGFETSWDDWKPEIRGDLVMNACVVPDGTYEVCSRTTGQAAAESSSAGTWTLNVLWKMCGIDVHMDPNIGKRLNALGNTLTTLTGEEDIDDIADLNSVNIADLSDEDEVDTMSPTIHTEAVDYRRQGTSSSQPGELRGRKIMKRLVDIRELNEQAKVIDDLKKLGASEGTINQEIQRYQQLESVAVNDIRRDVRKKLRRSSMRAASLKDKWGLGYKPSYSRSKSISASGRPPLKRMERASSRIGETDELPEIRVDAASPGPRVTFNIQDTFPEETELDLLSVTIEGPSHYSSNSEGSCSVFSSPKTTGGFSPSVPFQSEDGRRDDSLSSTSEDSEKDEKDEDRERERFYIYRKPSHTSRKKATGFAAVHQLLTERWPTTPVNRSLSGTATERNIDFELDIRVEIDSGKCVLHPTTLLQEHDDISLRRSYDRSSRSLDQDSPSKKKKFQTNYASTTHLMTGKKVPSSLQTKPSDLETTVFYIPGVDVKLHYNSKTLKTESPNASRGSSLPRTLSKESKLYGMKDSAASPSPSPLPCTVQSKTNTLLPPQPPPIPSAKGKGSGGVKTAKLYAWVALQSLPEEMVISPCLLDFLEKALETIPITPIERNYTAVSSQDEDMGHFDIPDPMEESTTSLVSSSTSAYSSFPVDVVVYVRVQPSQIKFSCLPVSRVECMLKLPSLDLVFSSNRGELETLGTTYPAETVSPGSNAPQTGAKTSASKAGMPGSSGLGSPLGRSRHSSSQSDLTGSSSSSSGLSFTACMSDFSLYVFHPYGAGKQKSTVSGLTSGSGGLGNVDEEPTSVTGRKDSLSINLEFVKVSLSRIRRSGGASFFESQSVSKSTSKMDTTLINISAVCDIGSASFKYDMRRLSEILAFPRAWYRRSIARRLFLGDQTVNLPTSGPGTPDSIEGVSQHLSPESSRKAYCRTWDQPSQSASFTHMPQSPNVFNEHMTNNTMSPGTAAQSLKSPASIRSRSVSDSSVPRRDSISKTSTPVNKSNKAASQQGTPWETLVVFAINLKQLNVQMNMSNVMGNTTWTTSGLKSQGRLSVGSNRDREISMSVGLGRSQLDSKGGVVGGTIDVNALEMVAHISEHPNQQPNHKIQITMGSTESRVDYMGSSILMGIFSNADLKLQDEWKVNLYNALDSSMTDKSEIFVHGDLKWDIFQVMISRSTTPDLIKIGMKLQEFFTQQFDTSKRALSTWGPVPYLPPKTMTNNLEKNSQEQFELYSWALSNIR
IRESfinder result
IRESfinder score
0.614148123
IRES/non IRES
IRES
riboCIRC information
riboCIRC ID
NA
NA
Evidence
Peptide sequence:
NA
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