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PanCircBase
Database for pancreatic islet circular RNAs

mmu_ciLlgl2_10582

Basic information of circular RNA

PanCircBase ID:

mmu_ciLlgl2_10582

mm39_Chr. Position ID:

chr11|115715003|115725585|+

Gene name:

Llgl2

Transcript:

ENSMUST00000103032.11

CircRNA type:

Circular intronic (ci)RNA

Exon/Intron count:

1

Exon/intron indexes:

1

Exon/intron offsets:

0

Genomic length:

10582

Exon/intron sizes in nt:

10582

Flanking exon/introns:

chr11:115715003-115725622

Splice length:

10582

Other database IDs:

Human Ortholog IDs:

Mature spliced Sequence:

GTGAGCCCACCTGGCTTTAAAGGACCTTTTGGGGTGCGAACCACTAGGGGCGGCGCGGCTCGGCTCGGGAGGATACGAGTCCCCTGGGTTTTCCAGGCGGGTCGGAGAGGGCAGCGCCCAGGTCTGCCCTGCTCGCCCAGATCTCCGACGTTTGGCTCGTCCCGGAGAAAGACACCTGTAGAAAGTGGCGCTGAGAACTTGTCTTTTCCTGTTCCGCCCCCCGGATTACCAAACTTGGGACTCGGGTTTGCACAATCGTGTTGGCTTTCGGGAGCAGGGAACAGGTGTCAGGCGTGGCTGGGTGCGGGGGACACAGTGAGCAGAGACACCGTTCCCAGACCCTTGTGCGAGGCGCCTCGACGCAGAGCGGGGCGACCCGGCTTCCTGTGACCCGGCGTCGCCAGCGGCGTCTGGAGCGCGTTACCTTGGCGGCTTAGTTCTTACCTCTGCCATCTGGGCGCTTTCCCTGCCCGCCCTTGTGCCTCCTAATCCTCCGACTCAGGAAGTCCGCGGGTGGGACTTGGTTTTCTCGTAGAAAGGGGAGCCTTTATATTTCCAGAGCGACTTTGGACACCTTTAGGCGATGGTATTGAGTCCCAGTCTGTTTTGTACACCGATGAGTGGGGGTTACACTGTGAAACTTGGCAAAGAGTGAAAAATTGCCAAAGAAAGTGTGCTATGCTTTTGCTCGGTTTGGGGGGGGGGGTTGGTGGACACACTGGGCCTTAGCTGTGGGAAGTGGCCATAACTGGGGTAACCGCGCTGTAGCTCTTAGAGGGTTTTCACCTGAAACAGGTGAACTTCCGGTAAGGAGGGTGGGGCTTAGATACCGCGTCCTTTCCCACAGGGACCCTTATGTCGACGCAACCTCTAGAGATCCAGTGTTAAAGTCCATTCTGAGCTAGATGTGTCAGGGTAACAAGGAAATGTTTGTGGAAAGAACCGAGTTGTGCTGTGGCCTGCCTAAAAGAAGGCAAGTTAGAGCGGCTTTGGGAGATCTCCTGGGTCTGTGTATATCAGTGCAAAGACCGGCAGGAGGACAGTGGAGGAAAAGATGTCTCAACAAATGAGTCAGGTAATTTTCTTTTCTCTTTAAATATTTATTTGTTTGTTTGTTTATTGGTTGGTTGATTCATTCAGACAGGGTGTTTCTGTGTAGCCCTGGCTGTCCTAGACCTCACTCTGTAGACTAGGCTGGCCTTGAACTCAGAGATCCACCTGCCTCTGCCTCTCAAGTGCTGGAATCAAAGGTGTGCTAAACTGCTGCTCCCTCCCCCACTTCCCCCAAACCCCCTGTGCTGCCGCTGACACCTGGCTCAGGTAGTTTTCTTGAGCCATTTCACACAGAATATTTGACAGGACTCAAACCAAGCTCTTTCTGTTCTCTGATGGGCTTGGACCAGTTCCCTGGAGAGCATTTCCAGGTCCTTAGGATATTTTGCATCTCTACTCTTCCTTGAGGCAATGGCGGCACCTCTCCAGTGACAGACTGGTATAATTTTAATCATATTAAAAGATTTAGCCTCAGCCGGACAGTGGTGGCACACGCCTTTAATCTCAACACTCAGGAGGCAGAGGCTGGCAGATCTCTGAGCTCGAGGCCAGCCTGGTCTACAGAATGAGTTCCAGGATATCCAATGCTATACAGAGAAACCCTGTGTTGGAAAAAAAAAAAGAACAAAATTTAGTCTCTCTTATTACATTTAAATTTTATTTTTTGTGTGTGCGTAGGTATGTGTGTGGAATGTACATGTTATGGTGTGTGTGTTTGTGTAGACCAAAGGACAAGTTGGAGGCGTGCTGTCCGTCCACCATGCTGGCCTTGAGGCTGGAACTCAGGTCATCAGGCTTGTCTCCAGGTGCCCTTACCTGCTGAGCCATCTTGCCAGCCATAAAATAACCTTCAACAAACAACAGTATCAGAGAAAAATAAATAAAGGGAAGGCTCAAATGAGCCTGTCCATTACAATGGGAGCTTGCTGTGTGGCTCACACCTGTAATCCCAGCACTCCTAGGACTGAGGTGGGAAGATGTCTACAAACTGGGGGGCCAAACAGGCCTACAGGACAAGCCTCATGATCTTATTTTATGTTAGATTCCTGTGTATGTGTGCACATGTGTACTGGTGCCTCCCGAGACCACAAAGGCATCAGAGCCACAGGCGCTTTATGTGGTGTGGGTGCTGGGAATGGACCTTACGTCTTCTGGAAAAGTTGCAAATGGTCTTCACTGTTGAGCCGTCTCCCCAGCCCCAAGACCCTTTAAAAAAAAAAAAAAAACCCGAGGGAATGGAAATCCATTGTTATAGAAACACGCACATTCAGAAAGCGAGAAGCAAGGCAGAAGGGGATTCCTTTGCCTGTCGTCTTTTCTTCACACAGTACCTCACTCATCCCAGGCATCAGATGACTATGAATCCTACCTTCCAGTTCTTGCTATAGCCTGAGGCCCCTCACTTAGCCACTCTGGGCCTGGGTTTCCCAGAGTTGCTGAGAATGTGAAGTCGTGAGCTCAGATGACCTAGTGCACAGCAGGCATCCACAAGGCAGAATTTGTTAATTTTCCTTGAAGCATGGAAAAACCCAGTTAGCCCCATTGAAGCCTTTTAGGTAGACACCTGGCCGGCTGAGGGGACTTGCAAAATCAGTGCTGTCTTGATTTTGTGACCTTTTGAAGTCAGTGGAGCTGAAGATCAGAATTTTATCCTGAAGCCATGCCTGGGGTGTGGGAGGACAGAAGGGGTGCTGCCTCTTCTAGACTTGACACCTCTTCCCTGACACTTGAAAGTTCACTTATTCCTCGGGAAAGCCGGGGTGAAGGATTGAGACTCACTCTCACTCTCTCCCTCTCCCTCTCCCTCCCTCTCTCCCTCTTCCCCTCTCCCTGTGTGTGTGTGTGTGTGTGTCTGTCTGTCTGTCTGTCTGTGTCTTCTGTTTCTGTTCTCCACCCAGGCTTACTCCATTCACTCTACACTCCGTCTAGGGGTAGGGCAGGGGAGTGAGACATTGCTCTACAGCTCTGCCCTTCCTCAAATAAGCGCAATCACACTTATTAAACATCTCTCTCTCCCTTTCTCCCCACTCCTGCCTTCCCTGGGAGAAAAAGGAGTATAGGGGAAATTTGGAGTCTTTGCCTTCGGCTGGTAGCCACTTGGTATCCTGGAGAAGAACCTGACTAGGTCTGACAGACAGACCCTCCGACCTTGTGGGGAGCCCTAGCTTCCTAGTTTTCTAAGGCAACCAGGAGCAGCTGCTGAGACTCCTGAGCTGGGTACCACGGGAGGCTGGAGAAGCTGACTCTGCCTCTGCAAGGTGGCTCCTCTGAGCAGCACTGGCAGCTCGCCCCGCTCTGGTTCTGGGAGGCCCTCTTATCTCCCTCAGTGATACTGCTCTCTCCCTCCTCCTGAGCCCGGGCATGCCAGGTCTGCTTGGCAACTTTTGTTTTCCTCTGCCCAGGTAGAGTTTAGGCAGGGGATAGGAGAGGAGATGGGTGTTGCCCATCAGCCACTGTACTACCTGCCCTCGCCAGTCTCTGATCCGTAGCTGTGCCCAGTTTCTTTGAGATGGCTTTCTCCGTCTGCCCTGACTCAGAGAAAACTGGTCCCTTGAAGAGTCACTTGCCCTTCCCAGGAACCACGAAGAATTCTTGAGCTAGGAGAGGCTCCTTTGGGCGTGGGGACAGGGAAGCCAAGAGGTACCTGACTCTACCCTTTAGGAATTCATCAAGAGACTAGAGCCCTCTCTTGAGGGACTTGGCTTGGTATGCTCAGGGTAAATAGTATTAATATTTAATAATATTATCCTGGGATCTTGTCAAGGAGTTGAGTATCCCGAAGCCATAGTCTGTGACAGGGCCTGCAAAGTTACCTCAGAGGATGCTGTATATGACATCTGAGTGGCCTTTGCCTGTGTCTTGAGAGCAGAATAGGACCATGTAGATTCCACCTCAGCATCTTTAAGGTCAGTGACTAGAGAAGACCATGCCTAGCTAATCCCTGGACTGTCCCTCTGCTTGCTTAGTCATTGATTTAAAGGAAGGTTCTCATTGTGTCTTGGCCCTGGGCACTGGAGGTAGCCTTAAAGCAAGGTCTCTGTCGTGGCATTTTCTTCCTTTCAAATGGGCAGGACAGGAAATAAATATGGCTAATAATCATGCATTTGCAAATGACACCAGCTATAGGGTTGGGAGAACCAAAGAAGAGGGCAGGATGTGCCACAATGGATAGAACTGGATGCCGCTGTACAAGGTTAAGACTTGCCAAGAGGACGGCTTTCGAGCTAAAGACGTGAGAAGGCAAGACAATTCTGAGAGTAAAGTTGGAGTACCCCAAAGTGTGGCCCCGGGGATACAACTGGATGAGACTGGCATGATCCCCTCTTCCTGGTCACTAACTGCTGGGGACAACAGTTCGTGTTTAAGGACTGGTAGGAGACCCTAGGATGAGGTTGGCCTAGGACCAGGTAACTCAGTCAAGCTGCCTAGCTGTCTCTGGCACACTTTACTGCATTTCTGGGGAGCCTGGTTTTAGATGGCAGAAGAGGGTTAAGTGAACATCTGGGAGATTTTGTGTTTAGGCTTCCCACGCTTTCGGGGGGCCCCTTCCCGGGCACTGCTCGAACATTCTGAGTAGCTGAAAGTGAGCAGATGAGTCTAGCATCAGAGGACTGGGACTTGGGCTCCCACCGTTTGGGGCTTGCAGACCTTTCAGGGGCCTCTGCAAAGTAGCCATGGGCATCAGAGTTGACACAGACAATAGCAGCTGCTATGGTGTCTTAGGGCCCTGCCCTGCCGCTCGCTCTAGCCGTGGGTGGTGCAGGGGTGGTCTCACATCCGCCACTCAGGAGACTAAAGCCACACCAGCACTGGCCTCACACAGGATGTTGGGCTGGGGCAGGGTGGGGGTGGGAGGGTGTCCGATAGATCAGTGACATGTTGTGGGAAGCCCAAGCACAGGGGACAGGTGAGGCGAGCTTGAATCCCACAGTTGTGCTCCTAGAGAGCAGGACTGTTGCTGGGCATGGCTCCAGCACCTCCTGTCCCTTAGGCTAACCCAGCAGTACCCAGTAGTGTCAGGACCTCCCAGCAGATCAGTTAACTGCCTGAGCTATTTAAGACCTTTCTTCTAGAGGACTGTCCTGCCCACAGCTCCTGGGCAGATGGGCCCGGCTTGGCTACACCTTGTTTGCATGGGGACAGATTAGCTCAGGAACCCCATCAGAGCTGTTTAACCTGGAGATCTCCACGTCCTCCTACCCAGGCATGGTCAGATCTGCCACGTGAGACAGGGGTCACCCCTGTGCAGTTGCTCTCTCCCCACAGTTCACTGTTCCCTGTTAGGAAAGGCCAGGGTAGAGGGTGGGGGTGGGGCAGAAAATAAGAGAGAGAGAAAGGAGGAGTCTTTCTTTAAGTCTTTTTTTTTTTCCAGGAAGGTGTCAAGGGGTGGACCAGACTTATATGGGCCCAGGAATGTTCTCCTGACAGGGGAATTTTGGGGGCTGATAGTGGTAAGAAAAGGAAATGACCAAATCATTGCCCAGAGGTGGCTCTCAGGCTGGTTCCACACACAAAGCATAGATCTGTGTGGAAAATGGTCAGCTGAGCTCCAATGAGCTGCCCTGAGTCCTGACTATCTGCCCTTGAGGGATCTGAACCGGGAGATGGCTCACGGGCTGGGCTGGTTTTGGACAGAGAGGGTGCCCAGCCAGGTTGGAGACTGAGACCAGGCCATCTTTAGAAGCTGGGGTGGAGAAGCCCAGTCTCAAGTAGCCACGTGGTGATTCAAATGACTCCTTCTTGGTGTCTGGTGTAGGGGTCTGAGGGCTCCTCGGGCCAAGGGAGCTCCTGACCTCCCCTCTTTGCTGGTTCTTAGTTCCTGGTTCTAACCAGCGGACTACTAAGCACTCCCAACTTTTGCACCTGTATCGGGTGGCGTCCAGTTAACTGAGGTCAGCACGGCTAGATAGGAATCCTGCATCCAAAGACTAATCCCACCACCAAGGTTGAGGCAGCCCTCCCCTGTCCATCACACTTGGGGGCCCTGTCTCTTCCCCTTTGGTCCTATGTACCGTGCAGATAAACCAGACGCCGATGCCATAACCTTTCCGAGGTGATTTCCAGTGTATTCTACCTGGCTTCCAAACCCTGTACACTGCTTTCTCACTAAATAGACTTCTGTTCACAGCCAGCTTTCTGTTGCAGGTCTGAGCCCCTTCACGGGGTGGGGGTGGGGGGGTCCTTGTCACTGGTCATTTAAGGCTGCTTCTTATTCTCCTGATAGCTAAGGCTAGAGAAGGAAGTGTTGGCCCACCCGTGTGGTTCTAAGGAACTTTCATTTTATACATCTTTAGGTGTATGTGCATGTTCATGCCTGTGAGTGGGTACACATGTGTGTGCACGTGTTTGTGGTAGGGCGGACAGGTCTCCTTCAGGTGTCATTCCTCAGGTACTGGCCACCTTGGGTTTTCTGAGACAGGATCTCTCACTGACCTGGAACTCACCTTGCACAGTGAGCCACAGGGGTCCGCCTCCCGGAACTCGCTGTGAGTAGTGAGCCACAGGGGTCCTCCTCTCTCAGCCTCTGCCCGGAGGTTACAGGCACACACCCCCACCCCAGCTCTTTGACCTGGGCTTTGAAGGTCAAGCTCGGGTCCTCATGCTTTTGCAAGATAACTTTTCTGGCTGAGCCAACCCCTAGCCTAAAATGTGATCACTTTACGACCAGGACGGGCTCAAGGGATGAGGAAGGCTTTTTTGAGTCCTGTCGCTAGAGGGTCAGAAAGATTCTTCAGACAGCAGTGGCAGCCAGAGGAGCCAGGAAAGGGCCAAACGAGAGGAGGGGCTGTGTGTGGTGAGACCCGACGGAGCGGCCTTCCCTGCGGCCCTGCCTCTGGCCGGCTGGCTTTTTCATCTTTCCGGTGTGTGTCTGTGCTGCGAGGTGCTATGCGAGTCACTCCATGATCTCAGCCTGGACTTGCCCCAGTGCTCCTGGAATGTGCTCCTTATCCTGGCCCACGGCACCATGCTCTTCCACCCGCCTGACCCTTAGCCCTGCCCTAAACCTTATGTGGCCGGTAATACCTGTCACCGAGGTCCTGAGTAGGGGATACGAGGAGAAAGTAGCAGGGAGGGGACAGTTGTAGACTGGGGCGAGGGAGCATTTGAGCGGTGGGGTTATGTGGCGGTATCCTAGGCAAAGTGTCCCGGGTAGAGTGCTGTGAACACATAGGGCCAAGAGGCTGACCAGTAACTCTCAGCGAGGCTTCCCCACCCCCACCCCACCCCCAGCGCCCTTGACCTCAGCATCTTGTATACTTTCTCCTTCCCCACTCTACTCTCCCTCCTGCCAGAGGGCATCTCTCATGGCCTGTCTGCCTCAGGAGTCGGCACACTGGGGGGCTGTAGGTTTGCCCCCTTAGTCTTTTAACCTCCCCATTTCCCAGGCATAGGCTAGGCAGGATCATCCCCTATCAGACTTCACAGCCCTAGCCTGACTTCCAGGCTCCTCTGAGAGCTTGCTTATCTGGGGTAGAAGGCCTGGGGTGGGGGAGGGGGCTTTCTGAACTGAGCCAGGCCCGCACCTGTCCTCCTCCTCCTCTAAGAAGGGGTGGGGTATTTTCATGCCTTGCCTTGGGGCAGTTACACTGGCCCCAAGCCTGTTCTACCTCCACCTTGGTCCCAGCTCCTAGGTCGCTCTTCTGTCTCCCTGGCCAATGGGGTCCCCAGCAGTAGGTCCCCCACAAGGTCACTGAGCCCTGCAGGTTAGTTCTTAAGAACACTCTGAAAGCAGTGACCAGGCACCTGGTCCCAAACTGCTTGGTTAGCTTTGAGCTCCATGGCCTGTGGGAGTATGTGCGCGTGGCCCTACCTTTTGACTGCAGCCATATAATTAGCTCTCCTGTAATAGCCATTCCTCATGGACGCCTTTATAAGCCCCTCAATTCTGGAGTTAGTCATACATGGGGGTCAGCTCTGAGTTCTGCCGCTTCCTATGCAGTGGTGACCGTGGGTAAGTTGCTTAGTCTGTGGCCTGGTTTCCTCTGTCAGGTAGGTGTGTTCTGCCTGGCCTCTCAGGTGGCCTCCGCCTGAGCTGATGTGTAGTGTTTACCCTGAGCACACAAACAACAGAGGTGGTCAGAACCTGGTCCCCACATTTTCCTGAGGTTCTCTGGAGGACGATTCACCCTCAGTGATTTGATGTTTCTACAGTGAGCCTAGACAACTTGAACCAAAACATTTAAAACGTATCAACAGGTACATTCAGGGGGTCTGGAACAGTGCTGGTCACAGCAAGTGCTCCGACGGCCACTTGGGTAGGTAGCCTGCACCGAGTGTTCTGCCCTCCTGACCAAGTGGGGCATGTCCCCTCTTTCCTGCCACTCACCACTTTGCCGTGTCACTTTGAGCTCCTGTGGGGTCCTTAGTACAGATGGTCCTGGTCCCTTCTTGTCCCTTCCCTAGAGTCCGCTGGTCTCTTTCCTTTCCCAGGGAGTCATTCCCAGCTTCCTGTGCCTTCTGACCTAGTGACCTCGGCTGGGGAGGGGAGCGCCTGCACCCCAGGAGCCGTAGCTGCTGATTTACGAGCTTGCACCACCCTCCCCCACGGCTGGAATGTTCAGCTAGCCAGCTCAGCTGTCTTCAGAGGCAGAGATGGCCGAAGTCTGGGGCCTGTTTTCACTCCAGTCCCAGGAGCCCCCAGTACTTGATGCCCCATGCTTGTTCTCTGGCTTGTTATGGGACCTCAGGTGGGTACCCAGACTTTCCCACCAATCCCCACGCCCCACCCCACCCATCCCCACGAGTGGGAGGCTCTGCAGTGGTCTTGCTTCCCTAAAAATGTGAAATCCCTAGTCTCTCTCCCCTCCCCCACTGCAAATCATGACCTTTTGATTGTCCCCAAAGGGTGACAGTTCCCCAGGGACTGGTCCCTGGTGTTTGGTTTGGAAGTGGCTTGTCCTGCTGATCTTTGCATTTGCAGGGGATGTGGCTCTATCCGCAGCCAGCAACTGGGGAGCCCCAGTCTTAAATCCAGAGTCTTTTCATAAGCAAAGTCTTGGCCCTTTAATTGATTGATTACAGAGCTGAGGATGAAGGGCCTTGTACACTGCCACCAAGTGCTCTGCCTCTGAACTGTACCCACCCCTGCCCCCAACCTTCAGGCTATCTTTCCAGCCTCGGTTTAGATAAGAAGCACCCCCCCTTCCCCAGTGGAGGCTGGGTGTCCCGTCCCTGCTCCAGCTTAAGTACTTAGCACACTTTGTCGGCCTGTCTACCTGACCCTACATGCAGCGTTCAGCGAGCTGGCGGCTATGTTTGCTTTCTCTTTCCGTCTAGAGTGGAATGAAGGAAGCCATTTCTGTAATGGCCTGAGTGAGCCCCTGTGTTCCTAGGAACATGCCCAGTGCCAAAGATGGTCAGCAGGAGACTGCTACTGGGCGCTGAAAGTCAAACCACCCACTCACAGCCCCTCCCCCAAGGAGAGTACAGAAATAGTTTCCCCCCTTGGGCTGGGAATGCTTTCTATGGTCGATGAGTGGCTTGGGGGTCTTGAGCTGTTTTCTTTATTCGGTACAGATAGAATGTCTTCTCTTGATTTGGGCTCCGCTGTGGCCCTTAAGAAAGGCCTCCTTAGGGAGTGGCAGGAAATAGGGTCTCACTTTGTACCCTTCATGGCTTTAAACCCTTGATGCTCTGTTTCCCCAGTGACCTAGGTTACACGTGTGCCACCATGCACATCTGAAAAGGAACATTTCTAGATGCCCAGTCAGAGCTCAGGGAGCTAGCTGGGAATTAGCAGCAAGGCAGATCTAGGATTAACCTAGAGAGCCCACAGCCTCATAGGACCAGACCTGGTCCCCAGCACCACGGGGCTTGGCTATGTGAGTCTTTGATGGGCTCCTTGCCCATCTTACCCCGACCTGGGTATTCCTGCTAAAACTGCCCCAGGTCCTTCCCCTGCATGTCCAGTTGAGGCACCGATCAAGAAATTCCACAGGACAGCCCCGCTTCTGCCAACCCACTGCACGGAGGGAGGCTGTGAAGTTTCTCTTTCTGGATTTTTATGTTTTTTTTTTTCTTTCAGAAAACAGGTTAACAATTAAGCTAATTAACCACAGGGCCTGCTGGCTCTCTTTGTTCCTATAAAGCTGGGGTAAATGGCTTCCTCCCCCAGTTTCTCCTGTTCCCATTATGGTAACTGGTGGCATTAGAGCATCAACCACGGGGAGAGACAGGCCCAGACCTCCAGGAACCAAGGCCTCACTGTCTCCCTGTCCTGGGCCCTTGCAGTGGAAGGAGCTCAGGAAAGTGAGGGTGAAGCTGGGCTTAAGAAGAGAGGCTGGTGGGGAGGTTCCCGGCCTGGCAGGGGAGGTTCTGGGCCTGGGCCTCAGCAGCTGGGGCCTGGGTGATCCTGGGTCTTAGGAGGGCCTGGGCCTGGGTGATACTGGCTCTGGGAAGCTGTGAACCTGGGTGACCCTGGGCTTGGACAGCTGTAGGCCTGGGTGATCCTGGGCCTTGGACACCTGTGTCCAGGATGATTCTGGCCCCAGGAAGCTGTGGGTCTGGGTGAGGCTGGGCCTGGACAACT

Divergent primers for circular RNA PCR

Primer Set-1

Forward primer

Tm

Reverse primer

Tm

Product size

CAGGATGATTCTGGCCCCAG

60.18

AACCCAGGGGACTCGTATCC

60.69

148

Primer Set-2

Forward primer

Tm

Reverse primer

Tm

Product size

CTGTAGGCCTGGGTGATCCT

60.69

TAGTGGTTCGCACCCCAAAA

59.82

144

PCR template sequence:

AGCTGTAGGCCTGGGTGATCCTGGGCCTTGGACACCTGTGTCCAGGATGATTCTGGCCCCAGGAAGCTGTGGGTCTGGGTGAGGCTGGGCCTGGACAACTGTGAGCCCACCTGGCTTTAAAGGACCTTTTGGGGTGCGAACCACTAGGGGCGGCGCGGCTCGGCTCGGGAGGATACGAGTCCCCTGGGTTTTCCAGGCGG

Note: Users can design additional primers for provided template sequence using Primer3 or NCBI primer-blast.

miRNAs associated with circular RNAs

No of miRNAs

68

Interacting miRNAs (#binding sites)

mmu-miR-298-5p(6), mmu-miR-709(5), mmu-miR-207(5), mmu-miR-185-5p(4), mmu-miR-484(4), mmu-miR-23b-3p(3), mmu-miR-23a-3p(3), mmu-miR-24-3p(3), mmu-miR-351-5p(3), mmu-miR-541-5p(3), mmu-miR-5101(3), mmu-miR-188-3p(3), mmu-miR-9-5p(2), mmu-miR-199a-5p(2), mmu-miR-31-5p(2), mmu-miR-205-5p(2), mmu-miR-339-5p(2), mmu-miR-22-3p(2), mmu-miR-466d-3p(2), mmu-miR-673-5p(2), mmu-miR-466b-3p(2), mmu-miR-670-5p(2), mmu-miR-210-3p(1), mmu-miR-20b-5p(1), mmu-miR-140-5p(1), mmu-miR-296-5p(1), mmu-miR-27b-3p(1), mmu-miR-27a-3p(1), mmu-let-7b-5p(1), mmu-miR-150-5p(1), mmu-miR-135a-5p(1), mmu-miR-34c-5p(1), mmu-miR-34a-5p(1), mmu-miR-19b-3p(1), mmu-miR-122-5p(1), mmu-miR-211-5p(1), mmu-miR-322-5p(1), mmu-miR-30c-5p(1), mmu-miR-328-3p(1), mmu-miR-217-5p(1), mmu-miR-196a-5p(1), mmu-miR-203-3p(1), mmu-miR-320-3p(1), mmu-miR-125b-5p(1), mmu-miR-138-5p(1), mmu-miR-10b-5p(1), mmu-miR-128-3p(1), mmu-miR-30b-5p(1), mmu-miR-149-5p(1), mmu-miR-29b-1-5p(1), mmu-miR-676-3p(1), mmu-miR-96-5p(1), mmu-miR-483-5p(1), mmu-miR-218-5p(1), mmu-miR-511-3p(1), mmu-miR-34b-5p(1), mmu-miR-666-5p(1), mmu-miR-383-5p(1), mmu-miR-342-5p(1), mmu-miR-680(1), mmu-miR-1187(1), mmu-miR-1198-5p(1), mmu-miR-452-3p(1), mmu-miR-3470b(1), mmu-miR-350-3p(1), mmu-miR-697(1), mmu-miR-1904(1), mmu-miR-339-3p(1)

siRNAs for circular RNA silencing

Junction sequence

GGCCTGGACAACTGTGAGCCCACCTG

siRNA sets

NA

Protein-coding potential of circular RNAs

CPAT analysis

CPAT ORF ID

CPAT Fickett

CPAT Hexamer

Coding probabilty

ORF length

NA

NA

NA

NA

NA

ORF sequence:

NA

Peptide sequence:

NA

IRESfinder result

IRESfinder score

0.693851943

IRES/non IRES

IRES

riboCIRC information

riboCIRC ID

NA

NA

Evidence

Peptide sequence:

NA

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